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page_id gide
title foundingGIDE
description GIDE (Global Image Data Ecosystem) is a colaborative project working towards the interoperability of bioimage data repositories across the globe. The project was initially funded by an European Comission Horizon Grant as "foundingGIDE", including multiple partners from Europe, Australia and Japan. The GIDE project uses RO-Crates as a metadata exchange format to harmonize outputs from three major bioimaging repositories (SSBD, BioImage Archive and IDR).
url https://founding-gide.eurobioimaging.eu/
image gide.svg
domains
biology
biomedical_science
medicine
tasks
data_handling
manage_data
roles
researcher
repository_manager
data_steward

Global Image Data Ecosystem

foundingGIDE project logo

[What GIDE is]

[How detached RO-Crates are being used in GIDE]

[The technical pipeline of foundingGIDE. A) The flow from harmonized data through RO-Crate to the GIDE-Portal and RDF dumps. B-C) Internal dashboards used for validating data quality. D) A SPARQL interface for querying the RO-Crates as RDF]

The GIDE RO-Crate Profile

[Overview of the RO-Crate profile]

[Simplified view of the GIDE RO-Crate profile]

[Background of metadata work]

[Context]


[Example dettached RO-Crate]


Resources

We are using the RO-Crate structure to harmonize metadata for https://www.gide-project.org/portal