Description of bug
Hi,
I have ~50M reads of Iso-Seq Nanopore data, but I don't have illumina RNAseq. I'd like to assemble the reads and map the transcripts to the genome to perform the genome annotation.
My understanding is that rnaSpades only perform a hybrid approach.
Is that correct or there's anything I'm missing here?
Thanks a lot
F
spades.log
Don't have it
params.txt
Don't know
SPAdes version
3.15
Operating System
CentOS
Python Version
Phython 3
Method of SPAdes installation
binaries
No errors reported in spades.log
Description of bug
Hi,
I have ~50M reads of Iso-Seq Nanopore data, but I don't have illumina RNAseq. I'd like to assemble the reads and map the transcripts to the genome to perform the genome annotation.
My understanding is that rnaSpades only perform a hybrid approach.
Is that correct or there's anything I'm missing here?
Thanks a lot
F
spades.log
Don't have it
params.txt
Don't know
SPAdes version
3.15
Operating System
CentOS
Python Version
Phython 3
Method of SPAdes installation
binaries
No errors reported in spades.log