Description of bug
Since BayesHammer is not working for some inputs and it seems that it won't be fixed in the near future, I am planning to do read error correction prior to SPAdes, then run SPAdes with the assembler-only mode. Do you have any suggestions for alternative read error correction softwares? Thank you!
My reads are 150bp Illumina short reads for a metagenome data. Thank you!
spades.log
NA
params.txt
NA
SPAdes version
NA
Operating System
NA
Python Version
NA
Method of SPAdes installation
NA
No errors reported in spades.log
Description of bug
Since BayesHammer is not working for some inputs and it seems that it won't be fixed in the near future, I am planning to do read error correction prior to SPAdes, then run SPAdes with the assembler-only mode. Do you have any suggestions for alternative read error correction softwares? Thank you!
My reads are 150bp Illumina short reads for a metagenome data. Thank you!
spades.log
NA
params.txt
NA
SPAdes version
NA
Operating System
NA
Python Version
NA
Method of SPAdes installation
NA
No errors reported in spades.log