added extra tests, checking covr, issue #2 #3
agusinacAnnotations
20 errors, 33 warnings, and 3 notices
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macos-latest (release)
Test failures
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macos-latest (release)
Process completed with exit code 1.
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macos-latest (release)
Test failures
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macos-latest (release)
R CMD check found ERRORs
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windows-latest (release)
Test failures
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windows-latest (release)
Process completed with exit code 1.
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windows-latest (release)
Test failures
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windows-latest (release)
R CMD check found ERRORs
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ubuntu-latest (release)
Test failures
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ubuntu-latest (release)
Process completed with exit code 1.
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ubuntu-latest (release)
Test failures
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ubuntu-latest (release)
R CMD check found ERRORs
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ubuntu-latest (oldrel-1)
Test failures
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ubuntu-latest (oldrel-1)
Process completed with exit code 1.
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ubuntu-latest (oldrel-1)
Test failures
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ubuntu-latest (oldrel-1)
R CMD check found ERRORs
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ubuntu-latest (devel)
Test failures
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ubuntu-latest (devel)
Process completed with exit code 1.
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ubuntu-latest (devel)
Test failures
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ubuntu-latest (devel)
R CMD check found ERRORs
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macos-latest (release)
/Users/runner/work/OmicFlow/OmicFlow/check/OmicFlow.Rcheck/00_pkg_src/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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macos-latest (release)
/Users/runner/work/OmicFlow/OmicFlow/check/OmicFlow.Rcheck/00_pkg_src/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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macos-latest (release)
Package unavailable to check Rd xrefs: ‘hillR’
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macos-latest (release)
prepare_Rd: ./man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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macos-latest (release)
Found the following significant warnings:
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macos-latest (release)
/private/var/folders/y6/nj790rtn62lfktb1sh__79hc0000gn/T/Rtmp3tw2zA/Rbuild12403ed76fef/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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macos-latest (release)
/private/var/folders/y6/nj790rtn62lfktb1sh__79hc0000gn/T/Rtmp3tw2zA/Rbuild12403ed76fef/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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windows-latest (release)
D:/a/OmicFlow/OmicFlow/check/OmicFlow.Rcheck/00_pkg_src/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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windows-latest (release)
D:/a/OmicFlow/OmicFlow/check/OmicFlow.Rcheck/00_pkg_src/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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windows-latest (release)
Package unavailable to check Rd xrefs: 'hillR'
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windows-latest (release)
prepare_Rd: ./man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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windows-latest (release)
Found the following significant warnings:
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windows-latest (release)
C:/Users/runneradmin/AppData/Local/Temp/RtmpeIxZcH/Rbuild19447e99655b/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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windows-latest (release)
C:/Users/runneradmin/AppData/Local/Temp/RtmpeIxZcH/Rbuild19447e99655b/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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ubuntu-latest (release)
/home/runner/work/OmicFlow/OmicFlow/check/OmicFlow.Rcheck/00_pkg_src/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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ubuntu-latest (release)
/home/runner/work/OmicFlow/OmicFlow/check/OmicFlow.Rcheck/00_pkg_src/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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ubuntu-latest (release)
Package unavailable to check Rd xrefs: ‘hillR’
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ubuntu-latest (release)
prepare_Rd: ./man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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ubuntu-latest (release)
Found the following significant warnings:
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ubuntu-latest (release)
/tmp/RtmpDgZ4bf/Rbuild1c254987833/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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ubuntu-latest (release)
/tmp/RtmpDgZ4bf/Rbuild1c254987833/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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ubuntu-latest (oldrel-1)
Package unavailable to check Rd xrefs: ‘hillR’
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ubuntu-latest (oldrel-1)
prepare_Rd: ./man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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ubuntu-latest (oldrel-1)
Found the following significant warnings:
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ubuntu-latest (oldrel-1)
/tmp/RtmpTa3yhk/Rbuild69b0a6052f4/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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ubuntu-latest (oldrel-1)
/tmp/RtmpTa3yhk/Rbuild69b0a6052f4/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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ubuntu-latest (devel)
/home/runner/work/OmicFlow/OmicFlow/check/OmicFlow.Rcheck/00_pkg_src/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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ubuntu-latest (devel)
/home/runner/work/OmicFlow/OmicFlow/check/OmicFlow.Rcheck/00_pkg_src/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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ubuntu-latest (devel)
Package unavailable to check Rd xrefs: ‘hillR’
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ubuntu-latest (devel)
prepare_Rd: ./man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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ubuntu-latest (devel)
Found the following significant warnings:
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ubuntu-latest (devel)
/tmp/Rtmp7BXo9m/Rbuildb8632468ef75/OmicFlow/man/metagenomics.Rd:267: unexpected END_OF_INPUT '}
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ubuntu-latest (devel)
/tmp/Rtmp7BXo9m/Rbuildb8632468ef75/OmicFlow/man/metagenomics.Rd:145: unexpected macro '\link', expecting '{'
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macos-latest (release)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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macos-latest (release)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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windows-latest (release)
The windows-latest label will migrate from Windows Server 2022 to Windows Server 2025 beginning September 2, 2025. For more information see https://github.com/actions/runner-images/issues/12677
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