SanPy is designed to analyze action potentials and extract a number of parameters including spike time, voltage threshold, half-widths, interval statistics, and lots more.
SanPy is optimized for a wide range of whole-cell current-clamp recordings including cardiac myocytes and neurons.
Please see the SanPy documentation.
If you find the code in this repository interesting, please email Robert Cudmore at robert.cudmore@gmail.com and we can get you started. We are always looking for users and collaborators.
Guarina L, Johnson TL, Griffith T, Santana LF, Cudmore RH (2024) SanPy: Software for the analysis and visualization of whole-cell current-clamp recordings. Biophys J, 2;123(7):759-769. doi: 10.1016/j.bpj.2024.02.025. PubMed: 38419330.
SanPy was originally described in a bioRxiv manuscript 2023.05.06.539660; doi: https://doi.org/10.1101/2023.05.06.539660.