Issue with BITFAM function

[sugarglider12]

Hi, I was wondering if anyone has seen this issue before. After loading in my normalized seurat object, loading the relevant packages, I get the following error when running the BITFAM() command.

BITFAM_res <- BITFAM(data = normalized_data_matrix, species = "human", scATAC_obj = NA, ncores = parallel::detectCores())
Calculating gene variances
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating feature variances of standardized and clipped values
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Warning: The following arguments are not used: drop
Error in h(simpleError(msg, call)) :
error in evaluating the argument 'i' in selecting a method for function '[': comparison (!=) is possible only for atomic and list types

Additionally, the preprocessing command produces a similar issue:

data_matrix_normalized <- BITFAM_preprocess(raw_data = d_matrix)
Error in h(simpleError(msg, call)) :
error in evaluating the argument 'x' in selecting a method for function 'colSums': comparison (>) is possible only for atomic and list types

My R version is 4.3.0.

[tobylanser]

Hi @sugarglider12 . I also have this issue. Have you since fixed the problem?