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add emit directive for BAM output in ONT_BASECALL process
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modules/local/base_call/main.nf

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -5,7 +5,7 @@ process ONT_BASECALL {
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tuple val(meta), path(pod5_dir)
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output:
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tuple val(meta.sampleid), path("${meta.sampleid}.raw.mod.bam")
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tuple val(meta.sampleid), path("${meta.sampleid}.raw.mod.bam"), emit: bam
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script:
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"""

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