added additional resource for adapter removal process

Author: maurya-anand

nextflow.config

@@ -21,18 +21,23 @@ profiles {
             errorStrategy = { task.exitStatus in [140, 143, 137, 104, 134, 139, 1] ? 'retry' : 'finish' }
             maxRetries = 3
             maxErrors = '-1'
-            cpus = { Math.min(4 * task.attempt, 16) }
-            memory = { "${Math.min(32 * task.attempt, 128)} GB" }
+            cpus = { Math.min(4 * task.attempt, 64) }
+            memory = { "${Math.min(16 * task.attempt, 128)} GB" }
             time = { "${Math.min(task.attempt, 3)}d" }
+            withName: 'ADAPTER_TRIM' {
+                cpus = { Math.min(32 * task.attempt, 64) }
+                memory = { "${Math.min(48 * task.attempt, 128)} GB" }
+                time = { "${Math.min(task.attempt, 3)}d" }
+            }
             withName: 'STAR_GENOME_INDEX' {
-                cpus = { Math.min(16 * task.attempt, 32) }
+                cpus = { Math.min(32 * task.attempt, 64) }
                 memory = { "${Math.min(48 * task.attempt, 128)} GB" }
                 time = { "${Math.min(task.attempt, 3)}d" }
             }
             withName: 'STAR_ALIGNMENT_WASP' {
                 cpus = { Math.min(32 * task.attempt, 64) }
-                memory = { "${Math.min(64 * task.attempt, 192)} GB" }
-                time = { "${Math.min(2 * task.attempt, 5)}d" }
+                memory = { "${Math.min(64 * task.attempt, 128)} GB" }
+                time = { "${Math.min(2 * task.attempt, 3)}d" }
             }
             withName: 'SUBSET_1KGP_VCF' {
                 cpus = { Math.min(32 * task.attempt, 64) }