[release] v0.3.2 - Removed immature h5mu support #57
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| # | |
| # Note: Vignettes require Python with scanpy/squidpy and are pre-built locally. | |
| # This workflow builds reference docs and deploys the full docs/ folder including pre-built articles. | |
| on: | |
| push: | |
| branches: [main, master] | |
| pull_request: | |
| branches: [main, master] | |
| release: | |
| types: [published] | |
| workflow_dispatch: | |
| name: pkgdown | |
| permissions: read-all | |
| jobs: | |
| pkgdown: | |
| runs-on: ubuntu-latest | |
| # Only restrict concurrency for non-PR jobs | |
| concurrency: | |
| group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| permissions: | |
| contents: write | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::pkgdown, local::. | |
| needs: website | |
| - name: Build site | |
| run: | | |
| # Build reference docs and home page | |
| # Articles/vignettes are pre-built locally (require Python with scanpy/squidpy) | |
| # and committed to docs/articles/ | |
| pkgdown::build_home() | |
| pkgdown::build_reference() | |
| pkgdown::build_news() | |
| pkgdown::build_redirects() | |
| # Build article index without re-rendering the articles | |
| pkgdown:::build_articles_index(pkgdown::as_pkgdown(".")) | |
| shell: Rscript {0} | |
| - name: Deploy to GitHub pages 🚀 | |
| if: github.event_name != 'pull_request' | |
| uses: JamesIves/github-pages-deploy-action@v4.6.8 | |
| with: | |
| clean: false | |
| branch: gh-pages | |
| folder: docs |