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As data manager I do not want the rdf harvester to add duplicate information into columns that have the same semantic annotation #6604

Description

@BrendaHijmans

Have you checked if this issue already exists?

  • yes

Molgenis EMX2 version

latest

Description

When data is harvested from an fdp or rdf endpoint, in molgenis columns with duplicated information are created when the annotations match to multiple columns in an emx2 model.
e.g. these columns all have 'dcat:provenance' as annotation, so the information in the node dcat:provenance is inserted into all columns.

Image

Reproduction steps

  1. Go to 'https://emx2.dev.molgenis.org'
  2. Click on '....'
  3. Scroll down to '....'
  4. See error

Expected behaviour

I want the information inserted only in one column.

possible solution: do not use duplicate annotations in the model.

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  • Operating system:
  • Browser:

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