From 944eaa6d0563f755c63a6b411b5ec8ad01d9b740 Mon Sep 17 00:00:00 2001 From: Musacca <38190552+Musacca@users.noreply.github.com> Date: Wed, 22 Jan 2020 14:53:41 +0200 Subject: [PATCH 01/29] Temporal stability prediction graph with mock data --- src/components/chart/PredictionLineChart.js | 90 ++++++++++--------- src/components/chart/ScatterChartCard.js | 63 +++++++++++++ .../explanation/PredictionLineChartCard.js | 30 ------- .../explanation/TemporalStability.js | 51 +++++++++++ src/util/dataReducers.js | 16 +++- src/views/Explanation/Explanation.js | 7 +- 6 files changed, 183 insertions(+), 74 deletions(-) create mode 100644 src/components/chart/ScatterChartCard.js delete mode 100644 src/components/explanation/PredictionLineChartCard.js create mode 100644 src/components/explanation/TemporalStability.js diff --git a/src/components/chart/PredictionLineChart.js b/src/components/chart/PredictionLineChart.js index 4a140734..bcda7ac1 100644 --- a/src/components/chart/PredictionLineChart.js +++ b/src/components/chart/PredictionLineChart.js @@ -8,54 +8,64 @@ class PredictionLineChart extends React.Component { } render() { let graph = { - series: [{ - name: 'Value', - data: this.props.data - }], - options: { - chart: { - height: 50, - type: 'line', - toolbar: { - show: false - }, - zoom: { - enabled: false - } - }, - dataLabels: { - enabled: false - }, - stroke: { - curve: 'straight' - }, + options: { + chart: { + height: 350, + type: 'line', + + toolbar: { + show: false + } + }, + colors: ['#77B6EA', '#545454'], + dataLabels: { + enabled: false, + }, + stroke: { + curve: 'smooth' + }, + title: { + text: 'Average High & Low Temperature', + align: 'left' + }, + markers: { + size: 1 + }, + xaxis: { + min: 0, + max: this.props.data.length +1, + tickAmount: this.props.data.length +1, title: { - align: 'left' - }, - grid: { - row: { - colors: ['#f3f3f3', 'transparent'], // takes an array which will be repeated on columns - opacity: 0.5 - }, - }, - xaxis: { - categories: this.props.categories, - title: { - text: 'Event number', - }, + text: 'Month' + } + }, + yaxis: { + title: { + text: 'Prediction' }, - yaxis: { - title: { - text: 'Prediction value', - }, + min: -1, + max: 2, + tickAmount: 3, + labels: { + formatter: function (val, i) { + return val; + } } + }, + legend: { + position: 'top', + horizontalAlign: 'right', + floating: true, + offsetY: -25, + offsetX: -5 } - }; + }, + }; const height = 4 * 65; const chart = ( diff --git a/src/components/chart/ScatterChartCard.js b/src/components/chart/ScatterChartCard.js new file mode 100644 index 00000000..fddf5992 --- /dev/null +++ b/src/components/chart/ScatterChartCard.js @@ -0,0 +1,63 @@ +import React from 'react'; +import PropTypes from 'prop-types'; +import ReactApexChart from 'react-apexcharts'; + +const ScatterChartCard = props => { + let scatterChartState = { + series: [{ + data: props.data + }], + options: { + type: 'scatter', + chart: { + toolbar: { + show: false + }, + }, + tooltip: { + y: { + formatter: function (val) { + return val; + } + } + }, + yaxis: { + title: { + text: 'Prediction', + }, + tickAmount: 2, + min: 0, + max: 2, + axisBorder: { + show: true, + color: '#000000', + offsetX: 0, + offsetY: 0 + }, + }, + xaxis: { + min: 0, + max: props.data.length + 1, + tickAmount: props.data.length + 1, + title: { + text: 'Time', + }, + } + } + }; + + return ( + ); + }; + + ScatterChartCard.propTypes = { + data: PropTypes.arrayOf(PropTypes.any.isRequired).isRequired, + }; + + export default ScatterChartCard; diff --git a/src/components/explanation/PredictionLineChartCard.js b/src/components/explanation/PredictionLineChartCard.js deleted file mode 100644 index 12edc189..00000000 --- a/src/components/explanation/PredictionLineChartCard.js +++ /dev/null @@ -1,30 +0,0 @@ -import React from 'react'; -import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; -import PredictionLineChart from '../chart/PredictionLineChart'; -import PropTypes from 'prop-types'; -import {parsePredictionResultList} from '../../util/dataReducers'; - -const PredictionLineChartCard = (props) => { - const predictionData = parsePredictionResultList(props.data); - return - - - { props.traceId != '' && props.jobId != '' ? - 'Temporal stability result with trace id: '+ props.traceId +' and job id: '+ props.jobId: ''} - - -
- -
- - - ; -}; -PredictionLineChartCard.propTypes = { - data: PropTypes.any.isRequired, - traceId: PropTypes.any, - jobId: PropTypes.any -}; -export default PredictionLineChartCard; diff --git a/src/components/explanation/TemporalStability.js b/src/components/explanation/TemporalStability.js new file mode 100644 index 00000000..b015f228 --- /dev/null +++ b/src/components/explanation/TemporalStability.js @@ -0,0 +1,51 @@ +import React from 'react'; +import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; +import PredictionLineChart from '../chart/PredictionLineChart'; +import PropTypes from 'prop-types'; +import {parseTemporalStabilityLimeResultList} from '../../util/dataReducers'; +import ScatterChartCard from '../chart/ScatterChartCard'; +import {Row} from 'react-grid-system'; + +const TemporalStability = (props) => { + const predictionData = parseTemporalStabilityLimeResultList(props.limeTemporalChartData); + + return
+ + + + + { props.traceId != '' && props.jobId != '' ? + 'Temporal stability result with trace id: '+ props.traceId +' and job id: '+ props.jobId: ''} + + +
+ +
+ + + + + + { props.traceId != '' && props.jobId != '' ? + 'Temporal stability result with trace id: '+ props.traceId +' and job id: '+ props.jobId: ''} + + +
+ +
+ + + +
+ ; +}; +TemporalStability.propTypes = { + limeTemporalChartData: PropTypes.any.isRequired, + predictionTemportalChartData: PropTypes.any.isRequired, + traceId: PropTypes.any, + jobId: PropTypes.any +}; +export default TemporalStability; diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index 1d057136..d6940280 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -283,7 +283,7 @@ export const parseLimeResult = (limeValueList) => { return ({labels: labels, values: values}); }; -export const parsePredictionResultList = (predictionList) => { +export const parseTemporalStabilityResultList = (predictionList) => { let data = []; let keys = Object.keys(predictionList); @@ -292,7 +292,19 @@ export const parsePredictionResultList = (predictionList) => { data.push(predictionList[keys[j]]); } } - return ({data: data, categories: keys}); + return ({data: data, categories: keys}); + }; + +export const parseTemporalStabilityLimeResultList = (predictionList) => { + let data = []; + let keys = Object.keys(predictionList); + + if (keys != null) { + for (let j = 0; j < keys.length; j++) { + data.push(predictionList[keys[j]]); + } + } + return ({data: [{data: data, name: 'prefix_1'}, {data: data, name: 'prefix_2'}], categories: keys}); }; export const getTraceAttributes = (traceList, selectedTrace) =>{ diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 5e6a689f..18f17795 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -27,8 +27,9 @@ import PostHocExplanation from '../../components/explanation/post_hoc'; import TraceExplanation from '../../components/explanation/TraceExplanation'; import {getTraceIdsFromLogs, parseLimeResult} from '../../util/dataReducers'; import JobModelsTable from '../../components/explanation/JobModelsTable'; -import PredictionLineChartCard from '../../components/explanation/PredictionLineChartCard'; +import PredictionLineChartCard from '../../components/explanation/TemporalStability'; import {predictionListRequested} from '../../actions/PredictionAction'; +import ScatterChartCard from '../../components/chart/ScatterChartCard'; class Explanation extends Component { constructor(props) { @@ -143,7 +144,9 @@ class Explanation extends Component {
From daefed491f7f9a32ce3f42ce97f870c7fa8705c9 Mon Sep 17 00:00:00 2001 From: Musacca <38190552+Musacca@users.noreply.github.com> Date: Wed, 22 Jan 2020 16:26:46 +0200 Subject: [PATCH 02/29] Temporal stability lime graph with mock data --- src/components/chart/PredictionLineChart.js | 11 +- .../explanation/TemporalStability.js | 13 +- src/mock_data/lime_temp_stability.json | 161 + src/mock_data/prediction_temp_stability.json | 5630 +++++++++++++++++ src/util/dataReducers.js | 50 +- src/views/Explanation/Explanation.js | 9 +- 6 files changed, 5842 insertions(+), 32 deletions(-) create mode 100644 src/mock_data/lime_temp_stability.json create mode 100644 src/mock_data/prediction_temp_stability.json diff --git a/src/components/chart/PredictionLineChart.js b/src/components/chart/PredictionLineChart.js index bcda7ac1..3d46db34 100644 --- a/src/components/chart/PredictionLineChart.js +++ b/src/components/chart/PredictionLineChart.js @@ -8,6 +8,11 @@ class PredictionLineChart extends React.Component { } render() { let graph = { + series: [ + {name: "prefix_1", + data: [-0.1376, 0.0487, 0.2555, 0.3617, -0.394, -0.2556] + } + ], options: { chart: { height: 350, @@ -17,7 +22,6 @@ class PredictionLineChart extends React.Component { show: false } }, - colors: ['#77B6EA', '#545454'], dataLabels: { enabled: false, }, @@ -25,7 +29,6 @@ class PredictionLineChart extends React.Component { curve: 'smooth' }, title: { - text: 'Average High & Low Temperature', align: 'left' }, markers: { @@ -36,7 +39,7 @@ class PredictionLineChart extends React.Component { max: this.props.data.length +1, tickAmount: this.props.data.length +1, title: { - text: 'Month' + text: 'Time' } }, yaxis: { @@ -56,8 +59,6 @@ class PredictionLineChart extends React.Component { position: 'top', horizontalAlign: 'right', floating: true, - offsetY: -25, - offsetX: -5 } }, }; diff --git a/src/components/explanation/TemporalStability.js b/src/components/explanation/TemporalStability.js index b015f228..d9bdd264 100644 --- a/src/components/explanation/TemporalStability.js +++ b/src/components/explanation/TemporalStability.js @@ -2,12 +2,15 @@ import React from 'react'; import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; import PredictionLineChart from '../chart/PredictionLineChart'; import PropTypes from 'prop-types'; -import {parseTemporalStabilityLimeResultList} from '../../util/dataReducers'; +import {parseTemporalStabilityLimeResultList, parseTemporalStabilityPredictionResultList} +from '../../util/dataReducers'; import ScatterChartCard from '../chart/ScatterChartCard'; import {Row} from 'react-grid-system'; const TemporalStability = (props) => { - const predictionData = parseTemporalStabilityLimeResultList(props.limeTemporalChartData); + const temporalStabilityLimeResult = parseTemporalStabilityLimeResultList(props.limeTemporalChartData, '00000912'); + const temporalStabilityPredictionResult = + parseTemporalStabilityPredictionResultList(props.predictionTemportalChartData, '00000916'); return
@@ -20,7 +23,7 @@ const TemporalStability = (props) => {
+ data = {temporalStabilityPredictionResult}/>
@@ -33,8 +36,8 @@ const TemporalStability = (props) => {
+ data = {temporalStabilityLimeResult.data} + categories = {temporalStabilityLimeResult.categories}/>
diff --git a/src/mock_data/lime_temp_stability.json b/src/mock_data/lime_temp_stability.json new file mode 100644 index 00000000..fcfafcc5 --- /dev/null +++ b/src/mock_data/lime_temp_stability.json @@ -0,0 +1,161 @@ + +{ + "00000912": { + "prefix_1": { + "prefix_5": { + "value": "", + "importance": -0.3940 + }, + "prefix_4": { + "value": "", + "importance": 0.3617 + }, + "prefix_6": { + "value": "", + "importance": -0.2556 + }, + "prefix_3": { + "value": "", + "importance": 0.2555 + }, + "prefix_1": { + "value": "assumption laboratory", + "importance": -0.1376 + }, + "prefix_2": { + "value": "", + "importance": 0.0487 + } + }, + "prefix_2": { + "prefix_5": { + "value": "", + "importance": -0.3982 + }, + "prefix_4": { + "value": "", + "importance": 0.3659 + }, + "prefix_3": { + "value": "", + "importance": 0.2504 + }, + "prefix_6": { + "value": "", + "importance": -0.2432 + }, + "prefix_1": { + "value": "assumption laboratory", + "importance": -0.1728 + }, + "prefix_2": { + "value": "assumption laboratory", + "importance": 0.0185 + } + }, + "prefix_3": { + "prefix_5": { + "value": "", + "importance": -0.4257 + }, + "prefix_4": { + "value": "", + "importance": 0.3563 + }, + "prefix_6": { + "value": "", + "importance": -0.2771 + }, + "prefix_1": { + "value": "assumption laboratory", + "importance": -0.1742 + }, + "prefix_2": { + "value": "assumption laboratory", + "importance": 0.0261 + }, + "prefix_3": { + "value": "assumption laboratory", + "importance": -0.0122 + } + }, + "prefix_4": { + "prefix_5": { + "value": "", + "importance": -0.4123 + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "importance": -0.3366 + }, + "prefix_6": { + "value": "", + "importance": -0.2850 + }, + "prefix_1": { + "value": "assumption laboratory", + "importance": -0.1372 + }, + "prefix_2": { + "value": "assumption laboratory", + "importance": 0.0221 + }, + "prefix_3": { + "value": "assumption laboratory", + "importance": -0.0186 + } + }, + "prefix_5": { + "prefix_4": { + "value": "unconjugated bilirubin", + "importance": -0.3972 + }, + "prefix_6": { + "value": "", + "importance": -0.2697 + }, + "prefix_5": { + "value": "bilirubin - total", + "importance": 0.2425 + }, + "prefix_1": { + "value": "assumption laboratory", + "importance": -0.1511 + }, + "prefix_3": { + "value": "assumption laboratory", + "importance": -0.0348 + }, + "prefix_2": { + "value": "assumption laboratory", + "importance": 0.0185 + } + }, + "prefix_6": { + "prefix_4": { + "value": "unconjugated bilirubin", + "importance": -0.4288 + }, + "prefix_6": { + "value": "glucose", + "importance": 0.2189 + }, + "prefix_1": { + "value": "assumption laboratory", + "importance": -0.1775 + }, + "prefix_5": { + "value": "bilirubin - total", + "importance": 0.1382 + }, + "prefix_2": { + "value": "assumption laboratory", + "importance": 0.0370 + }, + "prefix_3": { + "value": "assumption laboratory", + "importance": -0.0039 + } + } + } +} diff --git a/src/mock_data/prediction_temp_stability.json b/src/mock_data/prediction_temp_stability.json new file mode 100644 index 00000000..618f2410 --- /dev/null +++ b/src/mock_data/prediction_temp_stability.json @@ -0,0 +1,5630 @@ +{ + "00000924": { + "prefix_1": { + "value": "cytology - vagina -", + "predicted": "true" + }, + "prefix_2": { + "value": "outpatient follow-up consultation", + "predicted": "false" + }, + "prefix_3": { + "value": "administrative fee - the first pol", + "predicted": "false" + }, + "prefix_4": { + "value": "telephone consultation", + "predicted": "false" + } + }, + "00001089": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00000916": { + "prefix_1": { + "value": "e.c.g. - Electrocardiography", + "predicted": "true" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "unconjugated bilirubin", + "predicted": "true" + } + }, + "00000971": { + "prefix_1": { + "value": "e.c.g. - Electrocardiography", + "predicted": "true" + }, + "prefix_2": { + "value": "compartment for inspection", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "unconjugated bilirubin", + "predicted": "true" + } + }, + "00001011": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_4": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_5": { + "value": "glucose", + "predicted": "false" + }, + "prefix_6": { + "value": "urea", + "predicted": "true" + } + }, + "00000946": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001004": { + "prefix_1": { + "value": "ultrasound - internal genitals", + "predicted": "true" + }, + "prefix_2": { + "value": "immuno-pathology", + "predicted": "true" + }, + "prefix_3": { + "value": "histological examination - biopsies nno", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "hemoglobin photoelectric", + "predicted": "true" + } + }, + "00001035": { + "prefix_1": { + "value": "demurrage - all spec.beh.kinderg.-Reval.", + "predicted": "true" + }, + "prefix_2": { + "value": "histological examination - biopsies nno", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "unconjugated bilirubin", + "predicted": "true" + } + }, + "00001038": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "0", + "predicted": "false" + }, + "prefix_3": { + "value": "0", + "predicted": "false" + }, + "prefix_4": { + "value": "0", + "predicted": "false" + }, + "prefix_5": { + "value": "order rate", + "predicted": "true" + }, + "prefix_6": { + "value": "0", + "predicted": "true" + } + }, + "00000940": { + "prefix_1": { + "value": "e.c.g. - Electrocardiography", + "predicted": "true" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "unconjugated bilirubin", + "predicted": "true" + }, + "prefix_6": { + "value": "bilirubin - total", + "predicted": "true" + } + }, + "00000954": { + "prefix_1": { + "value": "thorax", + "predicted": "true" + }, + "prefix_2": { + "value": "First outpatient consultation", + "predicted": "true" + }, + "prefix_3": { + "value": "0", + "predicted": "true" + }, + "prefix_4": { + "value": "0", + "predicted": "true" + }, + "prefix_5": { + "value": "0", + "predicted": "true" + }, + "prefix_6": { + "value": "0", + "predicted": "true" + } + }, + "00000939": { + "prefix_1": { + "value": "telephone consultation", + "predicted": "true" + }, + "prefix_2": { + "value": "outpatient follow-up consultation", + "predicted": "true" + }, + "prefix_3": { + "value": "administrative fee - the first pol", + "predicted": "false" + } + }, + "00000970": { + "prefix_1": { + "value": "demurrage - all spec.beh.kinderg.-Reval.", + "predicted": "true" + }, + "prefix_2": { + "value": "histological examination - biopsies nno", + "predicted": "false" + }, + "prefix_3": { + "value": "cito histological examination", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "unconjugated bilirubin", + "predicted": "true" + } + }, + "00001054": { + "prefix_1": { + "value": "ultrasound - internal genitals", + "predicted": "true" + }, + "prefix_2": { + "value": "cytology - ectocervix -", + "predicted": "true" + }, + "prefix_3": { + "value": "First outpatient consultation", + "predicted": "true" + }, + "prefix_4": { + "value": "administrative fee - the first pol", + "predicted": "false" + }, + "prefix_5": { + "value": "immuno-pathology", + "predicted": "true" + }, + "prefix_6": { + "value": "0", + "predicted": "true" + } + }, + "00001123": { + "prefix_1": { + "value": "First outpatient consultation", + "predicted": "false" + }, + "prefix_2": { + "value": "administrative fee - the first pol", + "predicted": "false" + }, + "prefix_3": { + "value": "compartment for inspection", + "predicted": "false" + }, + "prefix_4": { + "value": "0", + "predicted": "false" + }, + "prefix_5": { + "value": "0", + "predicted": "false" + } + }, + "00001000": { + "prefix_1": { + "value": "First outpatient consultation", + "predicted": "false" + }, + "prefix_2": { + "value": "administrative fee - the first pol", + "predicted": "false" + }, + "prefix_3": { + "value": "telephone consultation", + "predicted": "false" + }, + "prefix_4": { + "value": "outpatient follow-up consultation", + "predicted": "false" + } + }, + "00001128": { + "prefix_1": { + "value": "e.c.g. - Electrocardiography", + "predicted": "true" + }, + "prefix_2": { + "value": "compartment for inspection", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "unconjugated bilirubin", + "predicted": "true" + } + }, + "00001138": { + "prefix_1": { + "value": "ultrasound - internal genitals", + "predicted": "true" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "unconjugated bilirubin", + "predicted": "true" + }, + "prefix_6": { + "value": "bilirubin - total", + "predicted": "true" + } + }, + "00000922": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "hemoglobin photoelectric", + "predicted": "false" + }, + "prefix_4": { + "value": "ABO blood group and rhesus factor", + "predicted": "false" + }, + "prefix_5": { + "value": "rhesus factor d - Centrifuge method - email", + "predicted": "true" + }, + "prefix_6": { + "value": "0", + "predicted": "true" + } + }, + "00001072": { + "prefix_1": { + "value": "e.c.g. - 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the first pol", + "predicted": "false" + } + }, + "00001027": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00000999": { + "prefix_1": { + "value": "0", + "predicted": "false" + }, + "prefix_2": { + "value": "compartment for inspection", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "unconjugated bilirubin", + "predicted": "true" + } + }, + "00001056": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "squamous cell carcinoma using eia", + "predicted": "false" + }, + "prefix_3": { + "value": "order rate", + "predicted": "false" + }, + "prefix_4": { + "value": "First outpatient consultation", + "predicted": "false" + }, + "prefix_5": { + "value": "administrative fee - the first pol", + "predicted": "false" + }, + "prefix_6": { + "value": "MRI abdomen", + "predicted": "false" + } + }, + "00001070": { + "prefix_1": { + "value": "0", + "predicted": "false" + }, + "prefix_2": { + "value": "cytology - ectocervix -", + "predicted": "false" + }, + "prefix_3": { + "value": "histological examination - biopsies nno", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "assumption laboratory", + "predicted": "false" + } + }, + "00001073": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00000981": { + "prefix_1": { + "value": "demurrage - all spec.beh.kinderg.-Reval.", + "predicted": "true" + }, + "prefix_2": { + "value": "0", + "predicted": "true" + }, + "prefix_3": { + "value": "0", + "predicted": "true" + }, + "prefix_4": { + "value": "0", + "predicted": "true" + }, + "prefix_5": { + "value": "demurrage - all spec.beh.kinderg.-Reval.", + "predicted": "true" + }, + "prefix_6": { + "value": "assumption laboratory", + "predicted": "true" + } + }, + "00001082": { + "prefix_1": { + "value": "First outpatient consultation", + "predicted": "false" + }, + "prefix_2": { + "value": "administrative fee - the first pol", + "predicted": "false" + }, + "prefix_3": { + "value": "outpatient follow-up consultation", + "predicted": "false" + } + }, + "00000965": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_4": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_5": { + "value": "glucose", + "predicted": "false" + }, + "prefix_6": { + "value": "urea", + "predicted": "true" + } + }, + "00001094": { + "prefix_1": { + "value": "cytology - ectocervix -", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "unconjugated bilirubin", + "predicted": "true" + }, + "prefix_6": { + "value": "bilirubin - total", + "predicted": "true" + } + }, + "00001028": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00000972": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001043": { + "prefix_1": { + "value": "ultrasound - internal genitals", + "predicted": "true" + }, + "prefix_2": { + "value": "First outpatient consultation", + "predicted": "true" + }, + "prefix_3": { + "value": "administrative fee - the first pol", + "predicted": "true" + }, + "prefix_4": { + "value": "telephone consultation", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "CEA - tumor marker using meia", + "predicted": "false" + } + }, + "00001061": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001071": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "unconjugated bilirubin", + "predicted": "true" + }, + "prefix_6": { + "value": "bilirubin - total", + "predicted": "true" + } + }, + "00001125": { + "prefix_1": { + "value": "histological examination - biopsies nno", + "predicted": "true" + }, + "prefix_2": { + "value": "0", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "unconjugated bilirubin", + "predicted": "true" + } + }, + "00001017": { + "prefix_1": { + "value": "e.c.g. - Electrocardiography", + "predicted": "true" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "unconjugated bilirubin", + "predicted": "true" + }, + "prefix_6": { + "value": "bilirubin - total", + "predicted": "true" + } + }, + "00000982": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00000957": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001121": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001006": { + "prefix_1": { + "value": "e.c.g. - Electrocardiography", + "predicted": "true" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "unconjugated bilirubin", + "predicted": "true" + }, + "prefix_6": { + "value": "bilirubin - total", + "predicted": "true" + } + }, + "00001135": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00000967": { + "prefix_1": { + "value": "histological examination - biopsies nno", + "predicted": "true" + }, + "prefix_2": { + "value": "First outpatient consultation", + "predicted": "true" + }, + "prefix_3": { + "value": "administrative fee - the first pol", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "0", + "predicted": "false" + }, + "prefix_6": { + "value": "0", + "predicted": "false" + } + }, + "00000983": { + "prefix_1": { + "value": "thorax", + "predicted": "true" + }, + "prefix_2": { + "value": "First outpatient consultation", + "predicted": "true" + }, + "prefix_3": { + "value": "administrative fee - the first pol", + "predicted": "false" + }, + "prefix_4": { + "value": "ct abdomen", + "predicted": "false" + }, + "prefix_5": { + "value": "outpatient follow-up consultation", + "predicted": "true" + } + }, + "00000998": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001063": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001118": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001007": { + "prefix_1": { + "value": "ultrasound - internal genitals", + "predicted": "true" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "hemoglobin photoelectric", + "predicted": "false" + }, + "prefix_5": { + "value": "creatinine", + "predicted": "false" + }, + "prefix_6": { + "value": "0", + "predicted": "false" + } + }, + "00000943": { + "prefix_1": { + "value": "ultrasound - internal genitals", + "predicted": "true" + }, + "prefix_2": { + "value": "histological examination - biopsies nno", + "predicted": "true" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_6": { + "value": "unconjugated bilirubin", + "predicted": "true" + } + }, + "00000987": { + "prefix_1": { + "value": "demurrage - all spec.beh.kinderg.-Reval.", + "predicted": "true" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_5": { + "value": "unconjugated bilirubin", + "predicted": "true" + }, + "prefix_6": { + "value": "bilirubin - total", + "predicted": "true" + } + }, + "00001068": { + "prefix_1": { + "value": "First outpatient consultation", + "predicted": "false" + }, + "prefix_2": { + "value": "administrative fee - the first pol", + "predicted": "false" + } + }, + "00000913": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + }, + "00001127": { + "prefix_1": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_2": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_3": { + "value": "assumption laboratory", + "predicted": "false" + }, + "prefix_4": { + "value": "unconjugated bilirubin", + "predicted": "false" + }, + "prefix_5": { + "value": "bilirubin - total", + "predicted": "false" + }, + "prefix_6": { + "value": "glucose", + "predicted": "false" + } + } +} diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index d6940280..c6f43841 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -283,28 +283,44 @@ export const parseLimeResult = (limeValueList) => { return ({labels: labels, values: values}); }; -export const parseTemporalStabilityResultList = (predictionList) => { - let data = []; - let keys = Object.keys(predictionList); - - if (keys != null) { - for (let j = 0; j < keys.length; j++) { - data.push(predictionList[keys[j]]); +export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => { + let data = [[]]; + let labels = [[]]; + let prefixs = []; + if (predictionList[traceId] != null || predictionList[traceId] != undefined) { + const traceAttr = predictionList[traceId]; + prefixs = Object.keys(traceAttr); + for (let j = 0; j < prefixs.length; j++) { + let arr = []; + const prefixValues = traceAttr[prefixs[j]]; + for (let k = 1; k <= Object.keys(prefixValues).length; k++) { + const value = prefixValues['prefix_'+k]; + // console.log("Heer" +value); + arr.push(value['importance']); + // labels[j].push(value['value']); } + data.push({name: prefixs[j], data: arr}); } - return ({data: data, categories: keys}); + data.shift(); + } + return ({data: data, categories: prefixs}); }; -export const parseTemporalStabilityLimeResultList = (predictionList) => { - let data = []; - let keys = Object.keys(predictionList); - - if (keys != null) { - for (let j = 0; j < keys.length; j++) { - data.push(predictionList[keys[j]]); - } +export const parseTemporalStabilityPredictionResultList = (predictionList, traceId) => { + let predictions = []; + let prefixs = []; + if (predictionList[traceId] != null || predictionList[traceId] != undefined) { + const traceAttr = predictionList[traceId]; + prefixs = Object.keys(traceAttr); + for (let j = 0; j < prefixs.length; j++) { + const prediction = traceAttr[prefixs[j]]['predicted']; + if (prediction == 'true') { + predictions.push(2); + } else predictions.push(1); } - return ({data: [{data: data, name: 'prefix_1'}, {data: data, name: 'prefix_2'}], categories: keys}); + } + + return predictions; }; export const getTraceAttributes = (traceList, selectedTrace) =>{ diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 18f17795..9f9ae22d 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -29,8 +29,8 @@ import {getTraceIdsFromLogs, parseLimeResult} from '../../util/dataReducers'; import JobModelsTable from '../../components/explanation/JobModelsTable'; import PredictionLineChartCard from '../../components/explanation/TemporalStability'; import {predictionListRequested} from '../../actions/PredictionAction'; -import ScatterChartCard from '../../components/chart/ScatterChartCard'; - +import limeTempStability from '../../mock_data/lime_temp_stability.json'; +import predictionTempStability from '../../mock_data/prediction_temp_stability.json'; class Explanation extends Component { constructor(props) { const selectedTrace = ''; @@ -144,9 +144,8 @@ class Explanation extends Component {
From da354e8d8ccb7927fa9d9d6617243da11a71336d Mon Sep 17 00:00:00 2001 From: Musacca <38190552+Musacca@users.noreply.github.com> Date: Wed, 22 Jan 2020 17:00:59 +0200 Subject: [PATCH 03/29] Temporal stability lime graph with mock data fix error --- src/components/chart/PredictionLineChart.js | 14 ++++++-------- src/util/dataReducers.js | 7 +++---- 2 files changed, 9 insertions(+), 12 deletions(-) diff --git a/src/components/chart/PredictionLineChart.js b/src/components/chart/PredictionLineChart.js index 3d46db34..bf911f01 100644 --- a/src/components/chart/PredictionLineChart.js +++ b/src/components/chart/PredictionLineChart.js @@ -8,11 +8,6 @@ class PredictionLineChart extends React.Component { } render() { let graph = { - series: [ - {name: "prefix_1", - data: [-0.1376, 0.0487, 0.2555, 0.3617, -0.394, -0.2556] - } - ], options: { chart: { height: 350, @@ -22,12 +17,14 @@ class PredictionLineChart extends React.Component { show: false } }, + stroke: { + curve: 'smooth', + show: true, + width: 2 + }, dataLabels: { enabled: false, }, - stroke: { - curve: 'smooth' - }, title: { align: 'left' }, @@ -55,6 +52,7 @@ class PredictionLineChart extends React.Component { } } }, + legend: { position: 'top', horizontalAlign: 'right', diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index c6f43841..b9fadeca 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -290,18 +290,17 @@ export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => if (predictionList[traceId] != null || predictionList[traceId] != undefined) { const traceAttr = predictionList[traceId]; prefixs = Object.keys(traceAttr); + data.pop(); for (let j = 0; j < prefixs.length; j++) { - let arr = []; const prefixValues = traceAttr[prefixs[j]]; for (let k = 1; k <= Object.keys(prefixValues).length; k++) { const value = prefixValues['prefix_'+k]; // console.log("Heer" +value); - arr.push(value['importance']); + if (j == 0) data.push({name: prefixs[k-1], data: []}); + data[k-1]['data'].push(value['importance']); // labels[j].push(value['value']); } - data.push({name: prefixs[j], data: arr}); } - data.shift(); } return ({data: data, categories: prefixs}); }; From 11548c9b790f3e0615a2d7755a118014d18151c2 Mon Sep 17 00:00:00 2001 From: Musacca <38190552+Musacca@users.noreply.github.com> Date: Wed, 22 Jan 2020 19:39:55 +0200 Subject: [PATCH 04/29] temporal stability APIs integrated --- src/actions/PredictionAction.js | 26 ++- src/actions/ServerActions.js | 23 ++- src/components/chart/PredictionLineChart.js | 14 +- src/components/chart/ScatterChartCard.js | 8 +- .../explanation/TemporalStability.js | 14 +- src/middlewares/ServerMiddleware.js | 9 +- src/mock_data/lime_temp_stability.json | 151 +----------------- src/reducers/Predictions.js | 65 ++++++-- src/util/dataReducers.js | 5 +- src/views/Explanation/Explanation.js | 49 ++++-- 10 files changed, 157 insertions(+), 207 deletions(-) diff --git a/src/actions/PredictionAction.js b/src/actions/PredictionAction.js index 7c1aff09..13b13be1 100644 --- a/src/actions/PredictionAction.js +++ b/src/actions/PredictionAction.js @@ -1,7 +1,21 @@ import {createPayloadForwardingAction} from './index'; -export const PREDICTION_LIST_REQUESTED = 'PREDICTION_LIST_REQUESTED'; -export const predictionListRequested = createPayloadForwardingAction(PREDICTION_LIST_REQUESTED); -export const PREDICTION_LIST_RETRIEVED = 'PREDICTION_LIST_RETRIEVED'; -export const predictionListRetrieved = createPayloadForwardingAction(PREDICTION_LIST_RETRIEVED); -export const PREDICTION_LIST_FAILED = 'PREDICTION_LIST_FAILED'; -export const predictionListFailed = createPayloadForwardingAction(PREDICTION_LIST_FAILED); +export const TEMPORAL_STABILITY_PREDICTION_LIST_REQUESTED = 'TEMPORAL_STABILITY_PREDICTION_LIST_REQUESTED'; +export const temporalPredictionListRequested = + createPayloadForwardingAction(TEMPORAL_STABILITY_PREDICTION_LIST_REQUESTED); +export const TEMPORAL_STABILITY_PREDICTION_LIST_RETRIEVED = 'TEMPORAL_STABILITY_PREDICTION_LIST_RETRIEVED'; +export const temporalPredictionListRetrieved = + createPayloadForwardingAction(TEMPORAL_STABILITY_PREDICTION_LIST_RETRIEVED); +export const TEMPORAL_STABILITY_PREDICTION_LIST_FAILED = 'TEMPORAL_STABILITY_PREDICTION_LIST_FAILED'; +export const temporalPredictionListFailed = + createPayloadForwardingAction(TEMPORAL_STABILITY_PREDICTION_LIST_FAILED); + + +export const TEMPORAL_STABILITY_LIME_PREDICTION_LIST_REQUESTED = 'LIME_PREDICTION_LIST_REQUESTED'; +export const temporalLimePredictionListRequested = + createPayloadForwardingAction(TEMPORAL_STABILITY_LIME_PREDICTION_LIST_REQUESTED); +export const TEMPORAL_STABILITY_LIME_PREDICTION_LIST_RETRIEVED = 'TEMPORAL_STABILITY_LIME_PREDICTION_LIST_RETRIEVED'; +export const temporalLimePredictionListRetrieved = + createPayloadForwardingAction(TEMPORAL_STABILITY_LIME_PREDICTION_LIST_RETRIEVED); +export const TEMPORAL_STABILITY_LIME_PREDICTION_LIST_FAILED = 'TEMPORAL_STABILITY_LIME_PREDICTION_LIST_FAILED'; +export const temporalLimePredictionListFailed = + createPayloadForwardingAction(TEMPORAL_STABILITY_LIME_PREDICTION_LIST_FAILED); diff --git a/src/actions/ServerActions.js b/src/actions/ServerActions.js index a5b3d5c6..c8ffc749 100644 --- a/src/actions/ServerActions.js +++ b/src/actions/ServerActions.js @@ -7,7 +7,8 @@ import {limeValueListFailed, limeValueListRetrieved} from './LimeActions'; import {splitFailed, splitsFailed, splitsRetrieved, splitSucceeded} from './SplitActions'; import {modelsFailed, modelsRetrieved} from './ModelActions'; import {predictionFailed, predictionSucceeded, replayFailed, replaySucceeded} from './RuntimeActions'; -import {predictionListRetrieved, predictionListFailed} from './PredictionAction'; +import {temporalLimePredictionListRetrieved, temporalLimePredictionListFailed, + temporalPredictionListRetrieved, temporalPredictionListFailed} from './PredictionAction'; export const getJobs = () => (dispatch) => { jsonAjax( @@ -140,14 +141,26 @@ export const getLimeValues = ({jobId, traceId}) => (dispatch) => { ); }; -export const getPredictionValues = ({jobId, traceId}) => (dispatch) => { +export const getLimeTemporalStabilityValues = ({jobId, traceId}) => (dispatch) => { jsonAjax( - `http://localhost:8083/api/test`, + SERVER_URL + `/explanation/lime_temporal_stability/${jobId}&${traceId}/`, 'GET', null, (predictionList) => { - dispatch(predictionListRetrieved(predictionList)); + dispatch(temporalLimePredictionListRetrieved(predictionList)); }, - ({error}) => dispatch(predictionListFailed(error)) + ({error}) => dispatch(temporalLimePredictionListFailed(error)) ); }; + +export const getPredictionTemporalStabilityValues = ({jobId, traceId}) => (dispatch) => { + jsonAjax( + SERVER_URL + `/explanation/temporal_stability/${jobId}&${traceId}/`, + 'GET', + null, + (predictionList) => { + dispatch(temporalPredictionListRetrieved(predictionList)); + }, + ({error}) => dispatch(temporalPredictionListFailed(error)) + ); +}; \ No newline at end of file diff --git a/src/components/chart/PredictionLineChart.js b/src/components/chart/PredictionLineChart.js index bf911f01..5e1f7768 100644 --- a/src/components/chart/PredictionLineChart.js +++ b/src/components/chart/PredictionLineChart.js @@ -29,7 +29,7 @@ class PredictionLineChart extends React.Component { align: 'left' }, markers: { - size: 1 + size: 5 }, xaxis: { min: 0, @@ -46,13 +46,18 @@ class PredictionLineChart extends React.Component { min: -1, max: 2, tickAmount: 3, + axisBorder: { + show: true, + color: '#000000', + offsetX: 0, + offsetY: 0 + }, labels: { formatter: function (val, i) { return val; } } }, - legend: { position: 'top', horizontalAlign: 'right', @@ -60,7 +65,7 @@ class PredictionLineChart extends React.Component { } }, }; - const height = 4 * 65; + const height = '350em'; const chart = ( ); - return
{this.props.data.length === 0 ? '' : chart}
; + return
{this.props.data.length === 0 || this.props.data[0].length === 0 + ? '' : chart}
; } } PredictionLineChart.propTypes = { diff --git a/src/components/chart/ScatterChartCard.js b/src/components/chart/ScatterChartCard.js index fddf5992..7d5c021a 100644 --- a/src/components/chart/ScatterChartCard.js +++ b/src/components/chart/ScatterChartCard.js @@ -46,16 +46,18 @@ const ScatterChartCard = props => { } }; - return ( - ); + />; + return
{props.data.length === 0 + ? '' : chart}
; }; + ScatterChartCard.propTypes = { data: PropTypes.arrayOf(PropTypes.any.isRequired).isRequired, }; diff --git a/src/components/explanation/TemporalStability.js b/src/components/explanation/TemporalStability.js index d9bdd264..c49f7945 100644 --- a/src/components/explanation/TemporalStability.js +++ b/src/components/explanation/TemporalStability.js @@ -6,11 +6,13 @@ import {parseTemporalStabilityLimeResultList, parseTemporalStabilityPredictionRe from '../../util/dataReducers'; import ScatterChartCard from '../chart/ScatterChartCard'; import {Row} from 'react-grid-system'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; const TemporalStability = (props) => { - const temporalStabilityLimeResult = parseTemporalStabilityLimeResultList(props.limeTemporalChartData, '00000912'); + const temporalStabilityLimeResult = + parseTemporalStabilityLimeResultList(props.limeTemporalChartData, props.traceId); const temporalStabilityPredictionResult = - parseTemporalStabilityPredictionResultList(props.predictionTemportalChartData, '00000916'); + parseTemporalStabilityPredictionResultList(props.predictionTemportalChartData, props.traceId); return
@@ -20,6 +22,8 @@ const TemporalStability = (props) => { { props.traceId != '' && props.jobId != '' ? 'Temporal stability result with trace id: '+ props.traceId +' and job id: '+ props.jobId: ''} + {!props.isLimeTempStabilityLoaded ? : null} +
{ { props.traceId != '' && props.jobId != '' ? 'Temporal stability result with trace id: '+ props.traceId +' and job id: '+ props.jobId: ''} + {!props.isPredictionTempStabilityLoaded ? : null} +
{ switch (action.type) { - case PREDICTION_LIST_REQUESTED: { + case TEMPORAL_STABILITY_LIME_PREDICTION_LIST_REQUESTED: { + return { + ...state, + fetchState: {inFlight: true}, + isLimeTempStabilityLoaded: false, + + }; + } + + case TEMPORAL_STABILITY_LIME_PREDICTION_LIST_RETRIEVED: { + const limeTempStabilityList = action.payload; + return { + ...state, + fetchState: {inFlight: false}, + limeTempStabilityList, + isLimeTempStabilityLoaded: true + }; + } + + case TEMPORAL_STABILITY_LIME_PREDICTION_LIST_FAILED: { + const limeTempStabilityList = initialState.limeTempStabilityList; + return { + ...state, + fetchState: {inFlight: false, error: action.payload}, + limeTempStabilityList, + isLimeTempStabilityLoaded: true + }; + } + + case TEMPORAL_STABILITY_PREDICTION_LIST_REQUESTED: { return { ...state, fetchState: {inFlight: true}, - isPredictionsLoaded: false, + isPredictionTempStabilityLoaded: false, }; } - case PREDICTION_LIST_RETRIEVED: { - const predictionList = action.payload; + case TEMPORAL_STABILITY_PREDICTION_LIST_RETRIEVED: { + const predictionTempStabilityList = action.payload; return { ...state, fetchState: {inFlight: false}, - predictionList, - isPredictionsLoaded: true + predictionTempStabilityList, + isPredictionTempStabilityLoaded: true }; } - case PREDICTION_LIST_FAILED: { - const predictionList = initialState.predictionList; + case TEMPORAL_STABILITY_PREDICTION_LIST_FAILED: { + const predictionTempStabilityList = initialState.predictionTempStabilityList; return { ...state, fetchState: {inFlight: false, error: action.payload}, - predictionList, - isPredictionsLoaded: true + predictionTempStabilityList, + isPredictionTempStabilityLoaded: true }; } default: diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index b9fadeca..d3ff9f2c 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -285,7 +285,6 @@ export const parseLimeResult = (limeValueList) => { export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => { let data = [[]]; - let labels = [[]]; let prefixs = []; if (predictionList[traceId] != null || predictionList[traceId] != undefined) { const traceAttr = predictionList[traceId]; @@ -295,10 +294,8 @@ export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => const prefixValues = traceAttr[prefixs[j]]; for (let k = 1; k <= Object.keys(prefixValues).length; k++) { const value = prefixValues['prefix_'+k]; - // console.log("Heer" +value); - if (j == 0) data.push({name: prefixs[k-1], data: []}); + if (j == 0) data.push({name: 'prefix_'+k, data: []}); data[k-1]['data'].push(value['importance']); - // labels[j].push(value['value']); } } } diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 9f9ae22d..d1527e28 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -28,9 +28,9 @@ import TraceExplanation from '../../components/explanation/TraceExplanation'; import {getTraceIdsFromLogs, parseLimeResult} from '../../util/dataReducers'; import JobModelsTable from '../../components/explanation/JobModelsTable'; import PredictionLineChartCard from '../../components/explanation/TemporalStability'; -import {predictionListRequested} from '../../actions/PredictionAction'; -import limeTempStability from '../../mock_data/lime_temp_stability.json'; -import predictionTempStability from '../../mock_data/prediction_temp_stability.json'; +import {temporalPredictionListRequested, temporalLimePredictionListRequested} from '../../actions/PredictionAction'; +// import limeTempStability from '../../mock_data/lime_temp_stability.json'; +// import predictionTempStability from '../../mock_data/prediction_temp_stability.json'; class Explanation extends Component { constructor(props) { const selectedTrace = ''; @@ -60,7 +60,7 @@ class Explanation extends Component { let split = splits[key]; if (split.id == splitId) { - logId = split.training_log; + logId = split.test_log; } }); @@ -70,22 +70,23 @@ class Explanation extends Component { onChangeTrace(trace) { this.props.onTraceChange(trace); this.setState({selectedTrace: trace}); - this.props.onRequestPredictionList(1, 1); if (this.props.jobId.length != 0) { - this.props.onRequestLimeValues(this.props.jobId, trace); + // this.props.onRequestLimeValues(this.props.jobId, trace); + this.props.onRequestLimeTemporalList(this.props.jobId, trace); + this.props.onRequestPredictionTemporalList(this.props.jobId, trace); } } onChangeJob(id) { this.props.onJobChange(id); if (this.props.selectedTrace !== '') { - this.props.onRequestLimeValues(id, this.props.selectedTrace); - this.props.onRequestPredictionList(id, this.props.selectedTrace); + // this.props.onRequestLimeValues(id, this.props.selectedTrace); + this.props.onRequestLimeTemporalList(id, this.props.selectedTrace); + this.props.onRequestPredictionTemporalList(id, this.props.selectedTrace); } } componentDidMount() { - this.props.onRequestPredictionList(1, 1); if (this.props.jobs.length === 0) { this.props.onRequestLogList(); this.props.onRequestSplitList(); @@ -104,6 +105,8 @@ class Explanation extends Component { } render() { + console.log(this.props.predictionTempStabilityList) + console.log(this.props.limeTempStabilityList) return (
@@ -137,16 +140,18 @@ class Explanation extends Component { />
-
-
@@ -167,7 +172,8 @@ Explanation.propTypes = { onRequestTraces: PropTypes.func.isRequired, onJobChange: PropTypes.func.isRequired, onRequestLimeValues: PropTypes.func.isRequired, - onRequestPredictionList: PropTypes.func.isRequired, + onRequestPredictionTemporalList: PropTypes.func.isRequired, + onRequestLimeTemporalList: PropTypes.func.isRequired, filterOptionChange: PropTypes.func.isRequired, labelTypeChange: PropTypes.func.isRequired, jobs: PropTypes.arrayOf(jobPropType).isRequired, @@ -195,8 +201,11 @@ Explanation.propTypes = { selectedTrace: PropTypes.any, filteredJobs: PropTypes.any, jobId: PropTypes.number.isRequired, + isLimeTempStabilityLoaded: PropTypes.bool.isRequired, + isPredictionTempStabilityLoaded: PropTypes.bool.isRequired, isLimeValuesLoaded: PropTypes.bool.isRequired, - predictionList: PropTypes.any + limeTempStabilityList: PropTypes.any, + predictionTempStabilityList: PropTypes.any }; const mapStateToProps = (state) => ({ @@ -216,7 +225,10 @@ const mapStateToProps = (state) => ({ jobsById: state.jobs.byId, jobId: state.jobs.predictionJobId, selectedTrace: state.jobs.selectedTrace, - predictionList: state.predictions.predictionList, + limeTempStabilityList: state.predictions.limeTempStabilityList, + predictionTempStabilityList: state.predictions.predictionTempStabilityList, + isLimeTempStabilityLoaded: state.predictions.isLimeTempStabilityLoaded, + isPredictionTempStabilityLoaded: state.predictions.isPredictionTempStabilityLoaded, filterOptions: ( ({ encodings, clusterings, classification, regression, timeSeriesPrediction, @@ -239,7 +251,10 @@ const mapDispatchToProps = (dispatch) => ({ onRequestJobs: () => dispatch(jobsRequested()), onRequestTraces: (id) => dispatch(traceListRequested({id})), onRequestLimeValues: (jobId, traceId) => dispatch(limeValueListRequested({jobId, traceId})), - onRequestPredictionList: (jobId, traceId) => dispatch(predictionListRequested({jobId, traceId})), + onRequestPredictionTemporalList: (jobId, traceId) => + dispatch(temporalPredictionListRequested({jobId, traceId})), + onRequestLimeTemporalList: (jobId, traceId) => + dispatch(temporalLimePredictionListRequested({jobId, traceId})), filterOptionChange: (_, event) => dispatch({ type: FILTER_OPTION_CHANGED, payload: {name: event.target.name, value: event.target.value} From 1f126e9f95c599521bd6981cc17d677efd3514da Mon Sep 17 00:00:00 2001 From: Musacca <38190552+Musacca@users.noreply.github.com> Date: Wed, 22 Jan 2020 20:37:41 +0200 Subject: [PATCH 05/29] clean code --- .../chart/PredictionLineChart.test.js | 7 +- .../PredictionLineChartCard.test.js | 12 - src/actions/ServerActions.js | 4 +- src/mock_data/lime_temp_stability.json | 18 - src/mock_data/prediction_temp_stability.json | 5630 ----------------- src/views/Explanation/Explanation.js | 10 +- 6 files changed, 7 insertions(+), 5674 deletions(-) delete mode 100644 src/__tests__/components/explanation/PredictionLineChartCard.test.js delete mode 100644 src/mock_data/lime_temp_stability.json delete mode 100644 src/mock_data/prediction_temp_stability.json diff --git a/src/__tests__/components/chart/PredictionLineChart.test.js b/src/__tests__/components/chart/PredictionLineChart.test.js index 39a9bd31..d8f0410c 100644 --- a/src/__tests__/components/chart/PredictionLineChart.test.js +++ b/src/__tests__/components/chart/PredictionLineChart.test.js @@ -4,7 +4,7 @@ import ReactApexChart from 'react-apexcharts'; import PredictionLineChart from '../../../components/chart/PredictionLineChart'; const categories = ['event', 'event1', 'event2', 'event3', 'event4']; -const values = [1, 0.8, 0.1, 0.3, 0]; +const values = [[16.4, 5.4], [21.7, 2], [25.4, 3], [19, 2], [10.9, 1]]; describe('PredictionLineChart', () => { it('renders with empty data', () => { @@ -18,8 +18,6 @@ describe('PredictionLineChart', () => { expect(element).toBeDefined(); expect(element.find(ReactApexChart).length).toBe(1); - const chartProps = element.find(ReactApexChart).props(); - expect(chartProps.options.xaxis.categories.length).toBe(0); }); it('renders with non empty data and label', () => { @@ -28,7 +26,6 @@ describe('PredictionLineChart', () => { expect(element.find(ReactApexChart).length).toBe(1); const chartProps = element.find(ReactApexChart).props(); - expect(chartProps.options.xaxis.categories.length).toBe(5); - expect(chartProps.series[0].data.length).toBe(5); + expect(chartProps.series.length).toBe(5); }); }); diff --git a/src/__tests__/components/explanation/PredictionLineChartCard.test.js b/src/__tests__/components/explanation/PredictionLineChartCard.test.js deleted file mode 100644 index 7598017e..00000000 --- a/src/__tests__/components/explanation/PredictionLineChartCard.test.js +++ /dev/null @@ -1,12 +0,0 @@ -import React from 'react'; -import {shallow} from 'enzyme'; -import PredictionLineChartCard from '../../../components/explanation/PredictionLineChartCard'; -import PredictionLineChart from '../../../components/chart/PredictionLineChart'; - -const data = {'11': 0.23601741983630742, '12': 0.6921891807047289, '13': 0.9996623681734312, '14': 0.7841328330041475}; -const element = shallow(); -it('renders', () => { - expect(element).toBeDefined(); - expect(element.find(PredictionLineChart).length).toBe(1); -}); - diff --git a/src/actions/ServerActions.js b/src/actions/ServerActions.js index c8ffc749..b4d11f4a 100644 --- a/src/actions/ServerActions.js +++ b/src/actions/ServerActions.js @@ -7,7 +7,7 @@ import {limeValueListFailed, limeValueListRetrieved} from './LimeActions'; import {splitFailed, splitsFailed, splitsRetrieved, splitSucceeded} from './SplitActions'; import {modelsFailed, modelsRetrieved} from './ModelActions'; import {predictionFailed, predictionSucceeded, replayFailed, replaySucceeded} from './RuntimeActions'; -import {temporalLimePredictionListRetrieved, temporalLimePredictionListFailed, +import {temporalLimePredictionListRetrieved, temporalLimePredictionListFailed, temporalPredictionListRetrieved, temporalPredictionListFailed} from './PredictionAction'; export const getJobs = () => (dispatch) => { @@ -163,4 +163,4 @@ export const getPredictionTemporalStabilityValues = ({jobId, traceId}) => (dispa }, ({error}) => dispatch(temporalPredictionListFailed(error)) ); -}; \ No newline at end of file +}; diff --git a/src/mock_data/lime_temp_stability.json b/src/mock_data/lime_temp_stability.json deleted file mode 100644 index 5a9a6760..00000000 --- a/src/mock_data/lime_temp_stability.json +++ /dev/null @@ -1,18 +0,0 @@ -{ - "00000912": { - "prefix_1": { - "prefix_3": { - "value": "assumption laboratory", - "importance": 0.1981 - }, - "prefix_2": { - "value": "assumption laboratory", - "importance": 0.1144 - }, - "prefix_1": { - "value": "assumption laboratory", - "importance": 0.0194 - } - } - } -} \ No newline at end of file diff --git a/src/mock_data/prediction_temp_stability.json b/src/mock_data/prediction_temp_stability.json deleted file mode 100644 index 618f2410..00000000 --- a/src/mock_data/prediction_temp_stability.json +++ /dev/null @@ -1,5630 +0,0 @@ -{ - "00000924": { - "prefix_1": { - "value": "cytology - vagina -", - "predicted": "true" - }, - "prefix_2": { - "value": "outpatient follow-up consultation", - "predicted": "false" - }, - "prefix_3": { - "value": "administrative fee - the first pol", - "predicted": "false" - }, - "prefix_4": { - "value": "telephone consultation", - "predicted": "false" - } - }, - "00001089": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000916": { - "prefix_1": { - "value": "e.c.g. - Electrocardiography", - "predicted": "true" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "unconjugated bilirubin", - "predicted": "true" - } - }, - "00000971": { - "prefix_1": { - "value": "e.c.g. - Electrocardiography", - "predicted": "true" - }, - "prefix_2": { - "value": "compartment for inspection", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "unconjugated bilirubin", - "predicted": "true" - } - }, - "00001011": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_4": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_5": { - "value": "glucose", - "predicted": "false" - }, - "prefix_6": { - "value": "urea", - "predicted": "true" - } - }, - "00000946": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - 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}, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001032": { - "prefix_1": { - "value": "0", - "predicted": "false" - }, - "prefix_2": { - "value": "cytology - ectocervix -", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "unconjugated bilirubin", - "predicted": "true" - } - }, - "00000919": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001034": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000960": { - "prefix_1": { - "value": "ultrasound - internal genitals", - "predicted": "true" - }, - "prefix_2": { - "value": "First outpatient consultation", - "predicted": "true" - }, - "prefix_3": { - "value": "administrative fee - the first pol", - "predicted": "true" - }, - "prefix_4": { - "value": "demurrage - all spec.beh.kinderg.-Reval.", - "predicted": "false" - }, - "prefix_5": { - "value": "190205 Class 3b A205", - "predicted": "false" - }, - "prefix_6": { - "value": "demurrage - all spec.beh.kinderg.-Reval.", - "predicted": "false" - } - }, - "00001066": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_4": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_5": { - "value": "glucose", - "predicted": "false" - }, - "prefix_6": { - "value": "urea", - "predicted": "true" - } - }, - "00001086": { - "prefix_1": { - "value": "telephone consultation", - "predicted": "true" - }, - "prefix_2": { - "value": "demurrage - all spec.beh.kinderg.-Reval.", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "urea", - "predicted": "true" - } - }, - "00000973": { - "prefix_1": { - "value": "histological examination - biopsies nno", - "predicted": "true" - }, - "prefix_2": { - "value": "First outpatient consultation", - "predicted": "true" - }, - "prefix_3": { - "value": "administrative fee - the first pol", - "predicted": "false" - }, - "prefix_4": { - "value": "e.c.g. - Electrocardiography", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "0", - "predicted": "false" - } - }, - "00001097": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001099": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000912": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000937": { - "prefix_1": { - "value": "e.c.g. - Electrocardiography", - "predicted": "true" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "unconjugated bilirubin", - "predicted": "true" - }, - "prefix_6": { - "value": "bilirubin - total", - "predicted": "true" - } - }, - "00001064": { - "prefix_1": { - "value": "ultrasound - internal genitals", - "predicted": "true" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "unconjugated bilirubin", - "predicted": "true" - }, - "prefix_6": { - "value": "bilirubin - total", - "predicted": "true" - } - }, - "00001065": { - "prefix_1": { - "value": "First outpatient consultation", - "predicted": "false" - }, - "prefix_2": { - "value": "administrative fee - the first pol", - "predicted": "false" - } - }, - "00001027": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000999": { - "prefix_1": { - "value": "0", - "predicted": "false" - }, - "prefix_2": { - "value": "compartment for inspection", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "unconjugated bilirubin", - "predicted": "true" - } - }, - "00001056": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "squamous cell carcinoma using eia", - "predicted": "false" - }, - "prefix_3": { - "value": "order rate", - "predicted": "false" - }, - "prefix_4": { - "value": "First outpatient consultation", - "predicted": "false" - }, - "prefix_5": { - "value": "administrative fee - the first pol", - "predicted": "false" - }, - "prefix_6": { - "value": "MRI abdomen", - "predicted": "false" - } - }, - "00001070": { - "prefix_1": { - "value": "0", - "predicted": "false" - }, - "prefix_2": { - "value": "cytology - ectocervix -", - "predicted": "false" - }, - "prefix_3": { - "value": "histological examination - biopsies nno", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "assumption laboratory", - "predicted": "false" - } - }, - "00001073": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000981": { - "prefix_1": { - "value": "demurrage - all spec.beh.kinderg.-Reval.", - "predicted": "true" - }, - "prefix_2": { - "value": "0", - "predicted": "true" - }, - "prefix_3": { - "value": "0", - "predicted": "true" - }, - "prefix_4": { - "value": "0", - "predicted": "true" - }, - "prefix_5": { - "value": "demurrage - all spec.beh.kinderg.-Reval.", - "predicted": "true" - }, - "prefix_6": { - "value": "assumption laboratory", - "predicted": "true" - } - }, - "00001082": { - "prefix_1": { - "value": "First outpatient consultation", - "predicted": "false" - }, - "prefix_2": { - "value": "administrative fee - the first pol", - "predicted": "false" - }, - "prefix_3": { - "value": "outpatient follow-up consultation", - "predicted": "false" - } - }, - "00000965": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_4": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_5": { - "value": "glucose", - "predicted": "false" - }, - "prefix_6": { - "value": "urea", - "predicted": "true" - } - }, - "00001094": { - "prefix_1": { - "value": "cytology - ectocervix -", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "unconjugated bilirubin", - "predicted": "true" - }, - "prefix_6": { - "value": "bilirubin - total", - "predicted": "true" - } - }, - "00001028": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000972": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001043": { - "prefix_1": { - "value": "ultrasound - internal genitals", - "predicted": "true" - }, - "prefix_2": { - "value": "First outpatient consultation", - "predicted": "true" - }, - "prefix_3": { - "value": "administrative fee - the first pol", - "predicted": "true" - }, - "prefix_4": { - "value": "telephone consultation", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "CEA - tumor marker using meia", - "predicted": "false" - } - }, - "00001061": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001071": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "unconjugated bilirubin", - "predicted": "true" - }, - "prefix_6": { - "value": "bilirubin - total", - "predicted": "true" - } - }, - "00001125": { - "prefix_1": { - "value": "histological examination - biopsies nno", - "predicted": "true" - }, - "prefix_2": { - "value": "0", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "unconjugated bilirubin", - "predicted": "true" - } - }, - "00001017": { - "prefix_1": { - "value": "e.c.g. - Electrocardiography", - "predicted": "true" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "unconjugated bilirubin", - "predicted": "true" - }, - "prefix_6": { - "value": "bilirubin - total", - "predicted": "true" - } - }, - "00000982": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000957": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001121": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001006": { - "prefix_1": { - "value": "e.c.g. - Electrocardiography", - "predicted": "true" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "unconjugated bilirubin", - "predicted": "true" - }, - "prefix_6": { - "value": "bilirubin - total", - "predicted": "true" - } - }, - "00001135": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00000967": { - "prefix_1": { - "value": "histological examination - biopsies nno", - "predicted": "true" - }, - "prefix_2": { - "value": "First outpatient consultation", - "predicted": "true" - }, - "prefix_3": { - "value": "administrative fee - the first pol", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "0", - "predicted": "false" - }, - "prefix_6": { - "value": "0", - "predicted": "false" - } - }, - "00000983": { - "prefix_1": { - "value": "thorax", - "predicted": "true" - }, - "prefix_2": { - "value": "First outpatient consultation", - "predicted": "true" - }, - "prefix_3": { - "value": "administrative fee - the first pol", - "predicted": "false" - }, - "prefix_4": { - "value": "ct abdomen", - "predicted": "false" - }, - "prefix_5": { - "value": "outpatient follow-up consultation", - "predicted": "true" - } - }, - "00000998": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001063": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001118": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001007": { - "prefix_1": { - "value": "ultrasound - internal genitals", - "predicted": "true" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "hemoglobin photoelectric", - "predicted": "false" - }, - "prefix_5": { - "value": "creatinine", - "predicted": "false" - }, - "prefix_6": { - "value": "0", - "predicted": "false" - } - }, - "00000943": { - "prefix_1": { - "value": "ultrasound - internal genitals", - "predicted": "true" - }, - "prefix_2": { - "value": "histological examination - biopsies nno", - "predicted": "true" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_6": { - "value": "unconjugated bilirubin", - "predicted": "true" - } - }, - "00000987": { - "prefix_1": { - "value": "demurrage - all spec.beh.kinderg.-Reval.", - "predicted": "true" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_5": { - "value": "unconjugated bilirubin", - "predicted": "true" - }, - "prefix_6": { - "value": "bilirubin - total", - "predicted": "true" - } - }, - "00001068": { - "prefix_1": { - "value": "First outpatient consultation", - "predicted": "false" - }, - "prefix_2": { - "value": "administrative fee - the first pol", - "predicted": "false" - } - }, - "00000913": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - }, - "00001127": { - "prefix_1": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_2": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_3": { - "value": "assumption laboratory", - "predicted": "false" - }, - "prefix_4": { - "value": "unconjugated bilirubin", - "predicted": "false" - }, - "prefix_5": { - "value": "bilirubin - total", - "predicted": "false" - }, - "prefix_6": { - "value": "glucose", - "predicted": "false" - } - } -} diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index d1527e28..88319fb7 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -29,8 +29,6 @@ import {getTraceIdsFromLogs, parseLimeResult} from '../../util/dataReducers'; import JobModelsTable from '../../components/explanation/JobModelsTable'; import PredictionLineChartCard from '../../components/explanation/TemporalStability'; import {temporalPredictionListRequested, temporalLimePredictionListRequested} from '../../actions/PredictionAction'; -// import limeTempStability from '../../mock_data/lime_temp_stability.json'; -// import predictionTempStability from '../../mock_data/prediction_temp_stability.json'; class Explanation extends Component { constructor(props) { const selectedTrace = ''; @@ -71,16 +69,16 @@ class Explanation extends Component { this.props.onTraceChange(trace); this.setState({selectedTrace: trace}); if (this.props.jobId.length != 0) { - // this.props.onRequestLimeValues(this.props.jobId, trace); + this.props.onRequestLimeValues(this.props.jobId, trace); this.props.onRequestLimeTemporalList(this.props.jobId, trace); - this.props.onRequestPredictionTemporalList(this.props.jobId, trace); + this.props.onRequestPredictionTemporalList(this.props.jobId, trace); } } onChangeJob(id) { this.props.onJobChange(id); if (this.props.selectedTrace !== '') { - // this.props.onRequestLimeValues(id, this.props.selectedTrace); + this.props.onRequestLimeValues(id, this.props.selectedTrace); this.props.onRequestLimeTemporalList(id, this.props.selectedTrace); this.props.onRequestPredictionTemporalList(id, this.props.selectedTrace); } @@ -105,8 +103,6 @@ class Explanation extends Component { } render() { - console.log(this.props.predictionTempStabilityList) - console.log(this.props.limeTempStabilityList) return (
From 5685f54d358c501a9b9510a05af6698ef16c00c7 Mon Sep 17 00:00:00 2001 From: Musacca <38190552+Musacca@users.noreply.github.com> Date: Wed, 22 Jan 2020 20:43:17 +0200 Subject: [PATCH 06/29] small error fix --- src/__tests__/components/chart/PredictionLineChart.test.js | 1 - 1 file changed, 1 deletion(-) diff --git a/src/__tests__/components/chart/PredictionLineChart.test.js b/src/__tests__/components/chart/PredictionLineChart.test.js index d8f0410c..3c83286f 100644 --- a/src/__tests__/components/chart/PredictionLineChart.test.js +++ b/src/__tests__/components/chart/PredictionLineChart.test.js @@ -17,7 +17,6 @@ describe('PredictionLineChart', () => { const element = shallow(); expect(element).toBeDefined(); expect(element.find(ReactApexChart).length).toBe(1); - }); it('renders with non empty data and label', () => { From b7a0833bed28029987b711151875bf94fdaa286f Mon Sep 17 00:00:00 2001 From: Musacca <38190552+Musacca@users.noreply.github.com> Date: Mon, 2 Mar 2020 10:09:07 +0200 Subject: [PATCH 07/29] Testing decision tree --- package-lock.json | 141 +++++++++++++++++- package.json | 2 + src/components/chart/DecisionTree.js | 98 ++++++++++++ .../chart/HorizontalBarChartCard.js | 2 +- src/components/chart/R3DecisionTree.js | 72 +++++++++ src/components/chart/VerticalBarChartCard.js | 100 +++++++++++++ .../explanation/TemporalStability.js | 16 +- src/util/dataReducers.js | 13 ++ src/views/Explanation/Explanation.js | 25 +++- 9 files changed, 455 insertions(+), 14 deletions(-) create mode 100644 src/components/chart/DecisionTree.js create mode 100644 src/components/chart/R3DecisionTree.js create mode 100644 src/components/chart/VerticalBarChartCard.js diff --git a/package-lock.json b/package-lock.json index 2eb01e86..e5dddabf 100644 --- a/package-lock.json +++ b/package-lock.json @@ -4279,6 +4279,11 @@ "wrap-ansi": "^2.0.0" } }, + "clone": { + "version": "2.1.2", + "resolved": "https://registry.npmjs.org/clone/-/clone-2.1.2.tgz", + "integrity": "sha1-G39Ln1kfHo+DZwQBYANFoCiHQ18=" + }, "clone-deep": { "version": "0.2.4", "resolved": "https://registry.npmjs.org/clone-deep/-/clone-deep-0.2.4.tgz", @@ -5049,6 +5054,104 @@ "resolved": "https://registry.npmjs.org/cyclist/-/cyclist-0.2.2.tgz", "integrity": "sha1-GzN5LhHpFKL9bW7WRHRkRE5fpkA=" }, + "d3": { + "version": "3.5.17", + "resolved": "https://registry.npmjs.org/d3/-/d3-3.5.17.tgz", + "integrity": "sha1-vEZ0gAQ3iyGjYMn8fPUjF5B2L7g=" + }, + "d3-color": { + "version": "1.4.0", + "resolved": "https://registry.npmjs.org/d3-color/-/d3-color-1.4.0.tgz", + "integrity": "sha512-TzNPeJy2+iEepfiL92LAAB7fvnp/dV2YwANPVHdDWmYMm23qIJBYww3qT8I8C1wXrmrg4UWs7BKc2tKIgyjzHg==" + }, + "d3-dispatch": { + "version": "1.0.6", + "resolved": "https://registry.npmjs.org/d3-dispatch/-/d3-dispatch-1.0.6.tgz", + "integrity": "sha512-fVjoElzjhCEy+Hbn8KygnmMS7Or0a9sI2UzGwoB7cCtvI1XpVN9GpoYlnb3xt2YV66oXYb1fLJ8GMvP4hdU1RA==" + }, + "d3-drag": { + "version": "1.2.5", + "resolved": "https://registry.npmjs.org/d3-drag/-/d3-drag-1.2.5.tgz", + "integrity": "sha512-rD1ohlkKQwMZYkQlYVCrSFxsWPzI97+W+PaEIBNTMxRuxz9RF0Hi5nJWHGVJ3Om9d2fRTe1yOBINJyy/ahV95w==", + "requires": { + "d3-dispatch": "1", + "d3-selection": "1" + } + }, + "d3-ease": { + "version": "1.0.6", + "resolved": "https://registry.npmjs.org/d3-ease/-/d3-ease-1.0.6.tgz", + "integrity": "sha512-SZ/lVU7LRXafqp7XtIcBdxnWl8yyLpgOmzAk0mWBI9gXNzLDx5ybZgnRbH9dN/yY5tzVBqCQ9avltSnqVwessQ==" + }, + "d3-format": { + "version": "1.4.3", + "resolved": "https://registry.npmjs.org/d3-format/-/d3-format-1.4.3.tgz", + "integrity": "sha512-mm/nE2Y9HgGyjP+rKIekeITVgBtX97o1nrvHCWX8F/yBYyevUTvu9vb5pUnKwrcSw7o7GuwMOWjS9gFDs4O+uQ==" + }, + "d3-graphviz": { + "version": "2.6.1", + "resolved": "https://registry.npmjs.org/d3-graphviz/-/d3-graphviz-2.6.1.tgz", + "integrity": "sha512-878AFSagQyr5tTOrM7YiVYeUC2/NoFcOB3/oew+LAML0xekyJSw9j3WOCUMBsc95KYe9XBYZ+SKKuObVya1tJQ==", + "requires": { + "d3-dispatch": "^1.0.3", + "d3-format": "^1.2.0", + "d3-interpolate": "^1.1.5", + "d3-path": "^1.0.5", + "d3-selection": "^1.1.0", + "d3-timer": "^1.0.6", + "d3-transition": "^1.1.1", + "d3-zoom": "^1.5.0", + "viz.js": "^1.8.2" + } + }, + "d3-interpolate": { + "version": "1.4.0", + "resolved": "https://registry.npmjs.org/d3-interpolate/-/d3-interpolate-1.4.0.tgz", + "integrity": "sha512-V9znK0zc3jOPV4VD2zZn0sDhZU3WAE2bmlxdIwwQPPzPjvyLkd8B3JUVdS1IDUFDkWZ72c9qnv1GK2ZagTZ8EA==", + "requires": { + "d3-color": "1" + } + }, + "d3-path": { + "version": "1.0.9", + "resolved": "https://registry.npmjs.org/d3-path/-/d3-path-1.0.9.tgz", + "integrity": "sha512-VLaYcn81dtHVTjEHd8B+pbe9yHWpXKZUC87PzoFmsFrJqgFwDe/qxfp5MlfsfM1V5E/iVt0MmEbWQ7FVIXh/bg==" + }, + "d3-selection": { + "version": "1.4.1", + "resolved": "https://registry.npmjs.org/d3-selection/-/d3-selection-1.4.1.tgz", + "integrity": "sha512-BTIbRjv/m5rcVTfBs4AMBLKs4x8XaaLkwm28KWu9S2vKNqXkXt2AH2Qf0sdPZHjFxcWg/YL53zcqAz+3g4/7PA==" + }, + "d3-timer": { + "version": "1.0.10", + "resolved": "https://registry.npmjs.org/d3-timer/-/d3-timer-1.0.10.tgz", + "integrity": "sha512-B1JDm0XDaQC+uvo4DT79H0XmBskgS3l6Ve+1SBCfxgmtIb1AVrPIoqd+nPSv+loMX8szQ0sVUhGngL7D5QPiXw==" + }, + "d3-transition": { + "version": "1.3.2", + "resolved": "https://registry.npmjs.org/d3-transition/-/d3-transition-1.3.2.tgz", + "integrity": "sha512-sc0gRU4PFqZ47lPVHloMn9tlPcv8jxgOQg+0zjhfZXMQuvppjG6YuwdMBE0TuqCZjeJkLecku/l9R0JPcRhaDA==", + "requires": { + "d3-color": "1", + "d3-dispatch": "1", + "d3-ease": "1", + "d3-interpolate": "1", + "d3-selection": "^1.1.0", + "d3-timer": "1" + } + }, + "d3-zoom": { + "version": "1.8.3", + "resolved": "https://registry.npmjs.org/d3-zoom/-/d3-zoom-1.8.3.tgz", + "integrity": "sha512-VoLXTK4wvy1a0JpH2Il+F2CiOhVu7VRXWF5M/LroMIh3/zBAC3WAt7QoIvPibOavVo20hN6/37vwAsdBejLyKQ==", + "requires": { + "d3-dispatch": "1", + "d3-drag": "1", + "d3-interpolate": "1", + "d3-selection": "1", + "d3-transition": "1" + } + }, "damerau-levenshtein": { "version": "1.0.5", "resolved": "https://registry.npmjs.org/damerau-levenshtein/-/damerau-levenshtein-1.0.5.tgz", @@ -5113,8 +5216,7 @@ "deep-equal": { "version": "1.0.1", "resolved": "https://registry.npmjs.org/deep-equal/-/deep-equal-1.0.1.tgz", - "integrity": "sha1-9dJgKStmDghO/0zbyfCK0yR0SLU=", - "dev": true + "integrity": "sha1-9dJgKStmDghO/0zbyfCK0yR0SLU=" }, "deep-is": { "version": "0.1.3", @@ -7814,6 +7916,27 @@ "resolved": "https://registry.npmjs.org/graceful-fs/-/graceful-fs-4.1.15.tgz", "integrity": "sha512-6uHUhOPEBgQ24HM+r6b/QwWfZq+yiFcipKFrOFiBEnWdy5sdzYoi+pJeQaPI5qOLRFqWmAXUPQNsielzdLoecA==" }, + "graphviz-react": { + "version": "1.0.4", + "resolved": "https://registry.npmjs.org/graphviz-react/-/graphviz-react-1.0.4.tgz", + "integrity": "sha512-pD9BlD7By+mLL3F4MHWdZhlBJNKR9aqmX6awysQSs1+ztNcELaVbnsUn2WZmcd0c49O6EWUye3aXGw25ypSnWQ==", + "requires": { + "d3-graphviz": "^2.6.0", + "react": "^16.6.0" + }, + "dependencies": { + "react": { + "version": "16.12.0", + "resolved": "https://registry.npmjs.org/react/-/react-16.12.0.tgz", + "integrity": "sha512-fglqy3k5E+81pA8s+7K0/T3DBCF0ZDOher1elBFzF7O6arXJgzyu/FW+COxFvAWXJoJN9KIZbT2LXlukwphYTA==", + "requires": { + "loose-envify": "^1.1.0", + "object-assign": "^4.1.1", + "prop-types": "^15.6.2" + } + } + } + }, "growly": { "version": "1.3.0", "resolved": "https://registry.npmjs.org/growly/-/growly-1.3.0.tgz", @@ -14329,6 +14452,20 @@ "pure-color": "^1.2.0" } }, + "react-d3-tree": { + "version": "1.16.1", + "resolved": "https://registry.npmjs.org/react-d3-tree/-/react-d3-tree-1.16.1.tgz", + "integrity": "sha512-LybzIZM4f4A+/ao6U5OEAZVQbQ08w0wmMYA7TZvPRYQ0QZnSImK9PFTiGR0PW8hVWQqOVJtSZyXlYyJ+M+Uh+A==", + "requires": { + "clone": "^2.1.1", + "d3": "3.5.17", + "deep-equal": "^1.0.1", + "prop-types": "^15.5.10", + "react-lifecycles-compat": "^3.0.4", + "react-transition-group": "^1.1.3", + "uuid": "^3.0.1" + } + }, "react-dev-utils": { "version": "6.1.1", "resolved": "https://registry.npmjs.org/react-dev-utils/-/react-dev-utils-6.1.1.tgz", diff --git a/package.json b/package.json index 959b1b56..eff3aa78 100644 --- a/package.json +++ b/package.json @@ -19,11 +19,13 @@ }, "dependencies": { "apexcharts": "^3.10.1", + "graphviz-react": "^1.0.4", "loader-runner": "^3.0.0", "node-sass": "^4.12.0", "prop-types": "^15.7.2", "react": "16.3.2", "react-apexcharts": "^1.3.3", + "react-d3-tree": "^1.16.1", "react-dom": "16.3.3", "react-ga": "^2.6.0", "react-google-charts": "^2.0.29", diff --git a/src/components/chart/DecisionTree.js b/src/components/chart/DecisionTree.js new file mode 100644 index 00000000..9b66def1 --- /dev/null +++ b/src/components/chart/DecisionTree.js @@ -0,0 +1,98 @@ +/* eslint-disable max-len */ +import React from 'react'; +import {Graphviz} from 'graphviz-react'; +class DecisionTree extends React.Component { + constructor(props) { + super(props); + } + render() { + return prefix_1 ≤ 23.5
gini = 0.5
samples = 100.0%
value = [0.5, 0.5]
class = prefix_2>]; + 1 [fillcolor=cornsilk, label=prefix_2 ≤ 30.5
gini = 0.38
samples = 64.8%
value = [0.255, 0.745]
class = prefix_2>]; + 0 -> 1 [color=steelblue, headlabel="True", labelangle=45, labeldistance="2.5"]; + 2 [fillcolor=cornsilk, label=prefix_2 ≤ 3.5
gini = 0.123
samples = 53.9%
value = [0.066, 0.934]
class = prefix_2>]; + 1 -> 2 [color=steelblue]; + 3 [fillcolor=coral, label=gini = 0.0
samples = 0.4%
value = [1.0, 0.0]
class = prefix_1>]; + 2 -> 3 [color=steelblue]; + 4 [fillcolor=cornsilk, label=prefix_1 ≤ 12.5
gini = 0.099
samples = 53.5%
value = [0.052, 0.948]
class = prefix_2>]; + 2 -> 4 [color=steelblue]; + 5 [fillcolor=lightsteelblue, label=gini = 0.0
samples = 28.5%
value = [0.0, 1.0]
class = prefix_2>]; + 4 -> 5 [color=steelblue]; + 6 [fillcolor=cornsilk, label=prefix_2 ≤ 9.0
gini = 0.193
samples = 25.0%
value = [0.108, 0.892]
class = prefix_2>]; + 4 -> 6 [color=steelblue]; + 7 [fillcolor=lightsteelblue, label=gini = -0.0
samples = 20.2%
value = [0.0, 1.0]
class = prefix_2>]; + 6 -> 7 [color=steelblue]; + 8 [fillcolor=cornsilk, label=prefix_1 ≤ 20.0
gini = 0.498
samples = 4.7%
value = [0.472, 0.528]
class = prefix_2>]; + 6 -> 8 [color=steelblue]; + 9 [fillcolor=coral, label=gini = 0.305
samples = 2.2%
value = [0.812, 0.188]
class = prefix_1>]; + 8 -> 9 [color=steelblue]; + 12 [fillcolor=lightsteelblue, label=gini = 0.0
samples = 2.5%
value = [0.0, 1.0]
class = prefix_2>]; + 8 -> 12 [color=steelblue]; + 13 [fillcolor=cornsilk, label=prefix_1 ≤ 11.5
gini = 0.261
samples = 10.9%
value = [0.846, 0.154]
class = prefix_1>]; + 1 -> 13 [color=steelblue]; + 14 [fillcolor=cornsilk, label=prefix_2 ≤ 35.5
gini = 0.498
samples = 3.1%
value = [0.467, 0.533]
class = prefix_2>]; + 13 -> 14 [color=steelblue]; + 15 [fillcolor=coral, label=gini = 0.0
samples = 0.4%
value = [1.0, 0.0]
class = prefix_1>]; + 14 -> 15 [color=steelblue]; + 16 [fillcolor=cornsilk, label=prefix_1 ≤ 5.5
gini = 0.44
samples = 2.6%
value = [0.327, 0.673]
class = prefix_2>]; + 14 -> 16 [color=steelblue]; + 17 [fillcolor=coral, label=gini = 0.411
samples = 0.8%
value = [0.711, 0.289]
class = prefix_1>]; + 16 -> 17 [color=steelblue]; + 20 [fillcolor=cornsilk, label=prefix_2 ≤ 44.5
gini = 0.186
samples = 1.9%
value = [0.104, 0.896]
class = prefix_2>]; + 16 -> 20 [color=steelblue]; + 21 [fillcolor=lightsteelblue, label=gini = 0.0
samples = 1.8%
value = [0.0, 1.0]
class = prefix_2>]; + 20 -> 21 [color=steelblue]; + 22 [fillcolor=coral, label=gini = 0.0
samples = 0.1%
value = [1.0, 0.0]
class = prefix_1>]; + 20 -> 22 [color=steelblue]; + 23 [fillcolor=cornsilk, label=prefix_1 ≤ 19.5
gini = 0.091
samples = 7.8%
value = [0.952, 0.048]
class = prefix_1>]; + 13 -> 23 [color=steelblue]; + 24 [fillcolor=coral, label=gini = 0.0
samples = 7.2%
value = [1.0, 0.0]
class = prefix_1>]; + 23 -> 24 [color=steelblue]; + 25 [fillcolor=lightsteelblue, label=gini = 0.0
samples = 0.7%
value = [0.0, 1.0]
class = prefix_2>]; + 23 -> 25 [color=steelblue]; + 26 [fillcolor=cornsilk, label=prefix_2 ≤ 7.0
gini = 0.297
samples = 35.2%
value = [0.819, 0.181]
class = prefix_1>]; + 0 -> 26 [color=steelblue, headlabel="False", labelangle="-45", labeldistance="2.5"]; + 27 [fillcolor=cornsilk, label=prefix_2 ≤ 3.5
gini = 0.124
samples = 3.0%
value = [0.066, 0.934]
class = prefix_2>]; + 26 -> 27 [color=steelblue]; + 28 [fillcolor=coral, label=gini = 0.0
samples = 0.1%
value = [1.0, 0.0]
class = prefix_1>]; + 27 -> 28 [color=steelblue]; + 29 [fillcolor=lightsteelblue, label=gini = 0.0
samples = 2.9%
value = [0.0, 1.0]
class = prefix_2>]; + 27 -> 29 [color=steelblue]; + 30 [fillcolor=cornsilk, label=prefix_2 ≤ 42.5
gini = 0.238
samples = 32.2%
value = [0.862, 0.138]
class = prefix_1>]; + 26 -> 30 [color=steelblue]; + 31 [fillcolor=cornsilk, label=prefix_1 ≤ 24.5
gini = 0.179
samples = 29.8%
value = [0.9, 0.1]
class = prefix_1>]; + 30 -> 31 [color=steelblue]; + 32 [fillcolor=coral, label=gini = 0.0
samples = 13.2%
value = [1.0, 0.0]
class = prefix_1>]; + 31 -> 32 [color=steelblue]; + 33 [fillcolor=cornsilk, label=prefix_2 ≤ 23.5
gini = 0.31
samples = 16.6%
value = [0.808, 0.192]
class = prefix_1>]; + 31 -> 33 [color=steelblue]; + 34 [fillcolor=cornsilk, label=prefix_2 ≤ 11.5
gini = 0.07
samples = 11.9%
value = [0.964, 0.036]
class = prefix_1>]; + 33 -> 34 [color=steelblue]; + 35 [fillcolor=coral, label=gini = 0.0
samples = 9.5%
value = [1.0, 0.0]
class = prefix_1>]; + 34 -> 35 [color=steelblue]; + 36 [fillcolor=cornsilk, label=prefix_2 ≤ 15.5
gini = 0.322
samples = 2.4%
value = [0.799, 0.201]
class = prefix_1>]; + 34 -> 36 [color=steelblue]; + 37 [fillcolor=lightsteelblue, label=gini = 0.0
samples = 0.8%
value = [0.0, 1.0]
class = prefix_2>]; + 36 -> 37 [color=steelblue]; + 38 [fillcolor=coral, label=gini = -0.0
samples = 1.7%
value = [1.0, 0.0]
class = prefix_1>]; + 36 -> 38 [color=steelblue]; + 39 [fillcolor=cornsilk, label=prefix_2 ≤ 38.5
gini = 0.268
samples = 4.7%
value = [0.159, 0.841]
class = prefix_2>]; + 33 -> 39 [color=steelblue]; + 40 [fillcolor=lightsteelblue, label=gini = 0.0
samples = 4.3%
value = [0.0, 1.0]
class = prefix_2>]; + 39 -> 40 [color=steelblue]; + 41 [fillcolor=coral, label=gini = 0.0
samples = 0.4%
value = [1.0, 0.0]
class = prefix_1>]; + 39 -> 41 [color=steelblue]; + 42 [fillcolor=cornsilk, label=prefix_2 ≤ 45.0
gini = 0.149
samples = 2.4%
value = [0.081, 0.919]
class = prefix_2>]; + 30 -> 42 [color=steelblue]; + 43 [fillcolor=lightsteelblue, label=gini = 0.0
samples = 2.3%
value = [0.0, 1.0]
class = prefix_2>]; + 42 -> 43 [color=steelblue]; + 44 [fillcolor=coral, label=gini = -0.0
samples = 0.1%
value = [1.0, 0.0]
class = prefix_1>]; + 42 -> 44 [color=steelblue]; + }`} /> + ; + } +} + +export default DecisionTree; diff --git a/src/components/chart/HorizontalBarChartCard.js b/src/components/chart/HorizontalBarChartCard.js index 017be48c..fb29e1a4 100644 --- a/src/components/chart/HorizontalBarChartCard.js +++ b/src/components/chart/HorizontalBarChartCard.js @@ -64,7 +64,7 @@ class HorizontalBarChartCard extends React.Component { } ] }; - const height = this.props.labels.length * 65; + const height = this.props.labels.length * 45; const chart = ( + +
+ ); +} +} +export default R3DecisionTree; + diff --git a/src/components/chart/VerticalBarChartCard.js b/src/components/chart/VerticalBarChartCard.js new file mode 100644 index 00000000..8fed5d7a --- /dev/null +++ b/src/components/chart/VerticalBarChartCard.js @@ -0,0 +1,100 @@ +import React from 'react'; +import PropTypes from 'prop-types'; +import ReactApexChart from 'react-apexcharts'; + +class HorizontalBarChartCard extends React.Component { + constructor(props) { + super(props); + } + + render() { + let graph = { + options: { + chart: { + height: 350, + type: 'line', + toolbar: { + show: false + } + }, + plotOptions: { + bar: { + horizontal: false, + distributed: false, + columnWidth: '30%', + barHeight: '80%' + } + }, + dataLabels: { + + enabled: true, + enabledOnSeries: [1], + formatter: function (val, opts) { + return val.toFixed(2); + } + }, + yaxis: [{ + labels: { + formatter: function (val, index) { + return val.toFixed(2); + } + }, + title: { + text: 'Count', + }, + }, { + labels: { + formatter: function (val, index) { + return val.toFixed(2); + } + }, + opposite: true, + title: { + text: 'Label: 0 means False, 1 means True' + } + }], + xaxis: { + labels: { + show: true + }, + axisBorder: { + show: false + }, + axisTicks: { + show: true + }, + categories: this.props.labels + } + }, + series: [ + { + name: 'Count', + type: 'column', + data: this.props.count + }, + { + name: 'Label', + type: 'line', + data: this.props.data + } + ] + }; + const height = 400; + const chart = ( + + ); + + return
{this.props.data.length === 0 ? '' : chart}
; + } +} + +HorizontalBarChartCard.propTypes = { + data: PropTypes.any.isRequired, + labels: PropTypes.any.isRequired, + count: PropTypes.any.isRequired +}; +export default HorizontalBarChartCard; diff --git a/src/components/explanation/TemporalStability.js b/src/components/explanation/TemporalStability.js index c49f7945..c543446b 100644 --- a/src/components/explanation/TemporalStability.js +++ b/src/components/explanation/TemporalStability.js @@ -26,10 +26,11 @@ const TemporalStability = (props) => {
- +
- + @@ -40,11 +41,10 @@ const TemporalStability = (props) => { {!props.isPredictionTempStabilityLoaded ? : null} -
- -
+
+ +
diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index d3ff9f2c..99a7999f 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -283,6 +283,18 @@ export const parseLimeResult = (limeValueList) => { return ({labels: labels, values: values}); }; +export const parseICEResult = (iceResult) => { + let labels = []; + let values = []; + let count = []; + for (let j = 0; j < iceResult.length; j++) { + labels.push(iceResult[j].value); + values.push(iceResult[j].label - 1).toFixed(2); + count.push(iceResult[j].count | 0); + } + return ({labels: labels, values: values, count: count}); +}; + export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => { let data = [[]]; let prefixs = []; @@ -303,6 +315,7 @@ export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => }; export const parseTemporalStabilityPredictionResultList = (predictionList, traceId) => { + let predictions = []; let prefixs = []; if (predictionList[traceId] != null || predictionList[traceId] != undefined) { diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 88319fb7..ef47ee6a 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -25,10 +25,14 @@ import ReactGA from 'react-ga'; import ExplanationHeaderCard from '../../components/explanation/ExplanationHeaderCard'; import PostHocExplanation from '../../components/explanation/post_hoc'; import TraceExplanation from '../../components/explanation/TraceExplanation'; -import {getTraceIdsFromLogs, parseLimeResult} from '../../util/dataReducers'; +import {getTraceIdsFromLogs, parseLimeResult, parseICEResult} from '../../util/dataReducers'; import JobModelsTable from '../../components/explanation/JobModelsTable'; -import PredictionLineChartCard from '../../components/explanation/TemporalStability'; +import TemporalStability from '../../components/explanation/TemporalStability'; import {temporalPredictionListRequested, temporalLimePredictionListRequested} from '../../actions/PredictionAction'; +import DecisionTree from '../../components/chart/DecisionTree'; +import VerticalBarChartCard from '../../components/chart/VerticalBarChartCard'; +import R3DecisionTree from '../../components/chart/R3DecisionTree'; + class Explanation extends Component { constructor(props) { const selectedTrace = ''; @@ -103,6 +107,8 @@ class Explanation extends Component { } render() { + const iceResult = parseICEResult([{'value': 'First outpatient consultation', 'label': 1.25, 'count': 48}, {'value': 'aspiration cytology behalf by p', 'label': 1.6666666666666667, 'count': 3}, {'value': 'assumption laboratory', 'label': 1.6923076923076923, 'count': 130}, {'value': 'compartment for inspection', 'label': 1.6666666666666667, 'count': 12}, {'value': 'ct abdomen', 'label': 2.0, 'count': 2}, {'value': 'cytology - abdominal tumor puncture', 'label': 1.0, 'count': 1}, {'value': 'cytology - ectocervix -', 'label': 1.32, 'count': 25}, {'value': 'cytology - vagina -', 'label': 1.2222222222222223, 'count': 9}, {'value': 'day care - all spec.beh.kind.-rev.', 'label': 1.0, 'count': 2}, {'value': 'demurrage - all spec.beh.kinderg.-Reval.', 'label': 1.7142857142857142, 'count': 28}, {'value': 'e.c.g. - Electrocardiography', 'label': 1.5, 'count': 22}, {'value': 'histological examination - biopsies nno', 'label': 1.3076923076923077, 'count': 13}, {'value': 'immuno-pathology', 'label': 1.25, 'count': 4}, {'value': 'inwend.geneesk. Out-year card costs', 'label': 2.0, 'count': 1}, {'value': 'inwend.geneesk. short-out card cost', 'label': 1.375, 'count': 8}, {'value': 'mammography chest wall', 'label': 1.3333333333333333, 'count': 3}, {'value': 'outpatient follow-up consultation', 'label': 1.087719298245614, 'count': 228}, {'value': 'telephone consultation', 'label': 1.0769230769230769, 'count': 13}, {'value': 'thorax', 'label': 1.375, 'count': 8}, {'value': 'treatment time - Unit t2 - megavolt', 'label': 1.0, 'count': 1}, {'value': 'treatment time - Unit t3 - megavolt', 'label': 1.0, 'count': 1}, {'value': 'ultrasound - internal genitals', 'label': 1.6333333333333333, 'count': 30}] + ); return (
@@ -117,7 +123,20 @@ class Explanation extends Component { jobId={this.props.jobId} />
+ {/*
+ +
*/} +
+ + +
+
+ +
- Date: Mon, 2 Mar 2020 10:12:21 +0200 Subject: [PATCH 08/29] Testing decision tree --- src/util/dataReducers.js | 1 - src/views/Explanation/Explanation.js | 4 ++-- 2 files changed, 2 insertions(+), 3 deletions(-) diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index 99a7999f..e5bf6082 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -315,7 +315,6 @@ export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => }; export const parseTemporalStabilityPredictionResultList = (predictionList, traceId) => { - let predictions = []; let prefixs = []; if (predictionList[traceId] != null || predictionList[traceId] != undefined) { diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index ef47ee6a..95880c33 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -29,7 +29,6 @@ import {getTraceIdsFromLogs, parseLimeResult, parseICEResult} from '../../util/d import JobModelsTable from '../../components/explanation/JobModelsTable'; import TemporalStability from '../../components/explanation/TemporalStability'; import {temporalPredictionListRequested, temporalLimePredictionListRequested} from '../../actions/PredictionAction'; -import DecisionTree from '../../components/chart/DecisionTree'; import VerticalBarChartCard from '../../components/chart/VerticalBarChartCard'; import R3DecisionTree from '../../components/chart/R3DecisionTree'; @@ -107,6 +106,7 @@ class Explanation extends Component { } render() { + // eslint-disable-next-line max-len const iceResult = parseICEResult([{'value': 'First outpatient consultation', 'label': 1.25, 'count': 48}, {'value': 'aspiration cytology behalf by p', 'label': 1.6666666666666667, 'count': 3}, {'value': 'assumption laboratory', 'label': 1.6923076923076923, 'count': 130}, {'value': 'compartment for inspection', 'label': 1.6666666666666667, 'count': 12}, {'value': 'ct abdomen', 'label': 2.0, 'count': 2}, {'value': 'cytology - abdominal tumor puncture', 'label': 1.0, 'count': 1}, {'value': 'cytology - ectocervix -', 'label': 1.32, 'count': 25}, {'value': 'cytology - vagina -', 'label': 1.2222222222222223, 'count': 9}, {'value': 'day care - all spec.beh.kind.-rev.', 'label': 1.0, 'count': 2}, {'value': 'demurrage - all spec.beh.kinderg.-Reval.', 'label': 1.7142857142857142, 'count': 28}, {'value': 'e.c.g. - Electrocardiography', 'label': 1.5, 'count': 22}, {'value': 'histological examination - biopsies nno', 'label': 1.3076923076923077, 'count': 13}, {'value': 'immuno-pathology', 'label': 1.25, 'count': 4}, {'value': 'inwend.geneesk. Out-year card costs', 'label': 2.0, 'count': 1}, {'value': 'inwend.geneesk. short-out card cost', 'label': 1.375, 'count': 8}, {'value': 'mammography chest wall', 'label': 1.3333333333333333, 'count': 3}, {'value': 'outpatient follow-up consultation', 'label': 1.087719298245614, 'count': 228}, {'value': 'telephone consultation', 'label': 1.0769230769230769, 'count': 13}, {'value': 'thorax', 'label': 1.375, 'count': 8}, {'value': 'treatment time - Unit t2 - megavolt', 'label': 1.0, 'count': 1}, {'value': 'treatment time - Unit t3 - megavolt', 'label': 1.0, 'count': 1}, {'value': 'ultrasound - internal genitals', 'label': 1.6333333333333333, 'count': 30}] ); return ( @@ -125,7 +125,7 @@ class Explanation extends Component {
{/*
-
*/} +
*/}
Date: Wed, 11 Mar 2020 10:49:08 +0200 Subject: [PATCH 09/29] decision tree clickable --- package-lock.json | 43 + package.json | 3 + src/views/Explanation/Explanation.js | 13 +- src/viz.svg | 39004 +++++++++++++++++++++++++ 4 files changed, 39060 insertions(+), 3 deletions(-) create mode 100644 src/viz.svg diff --git a/package-lock.json b/package-lock.json index e5dddabf..6d739884 100644 --- a/package-lock.json +++ b/package-lock.json @@ -1965,12 +1965,26 @@ "integrity": "sha512-DMiqG51GwES/c4ScBY0u5bDlH44+oY8AeYHjY1SGCWidD7h08o1dfHue/TGK7REmif2KiJzaUskO+Q0eaeZ2fQ==", "dev": true }, + "@types/prop-types": { + "version": "15.7.3", + "resolved": "https://registry.npmjs.org/@types/prop-types/-/prop-types-15.7.3.tgz", + "integrity": "sha512-KfRL3PuHmqQLOG+2tGpRO26Ctg+Cq1E01D2DMriKEATHgWLfeNDmq9e29Q9WIky0dQ3NPkd1mzYH8Lm936Z9qw==" + }, "@types/q": { "version": "1.5.2", "resolved": "https://registry.npmjs.org/@types/q/-/q-1.5.2.tgz", "integrity": "sha512-ce5d3q03Ex0sy4R14722Rmt6MT07Ua+k4FwDfdcToYJcMKNtRVQvJ6JCAPdAmAnbRb6CsX6aYb9m96NGod9uTw==", "dev": true }, + "@types/react": { + "version": "16.9.23", + "resolved": "https://registry.npmjs.org/@types/react/-/react-16.9.23.tgz", + "integrity": "sha512-SsGVT4E7L2wLN3tPYLiF20hmZTPGuzaayVunfgXzUn1x4uHVsKH6QDJQ/TdpHqwsTLd4CwrmQ2vOgxN7gE24gw==", + "requires": { + "@types/prop-types": "*", + "csstype": "^2.2.0" + } + }, "@types/tapable": { "version": "1.0.2", "resolved": "https://registry.npmjs.org/@types/tapable/-/tapable-1.0.2.tgz", @@ -5041,6 +5055,11 @@ "cssom": "0.3.x" } }, + "csstype": { + "version": "2.6.9", + "resolved": "https://registry.npmjs.org/csstype/-/csstype-2.6.9.tgz", + "integrity": "sha512-xz39Sb4+OaTsULgUERcCk+TJj8ylkL4aSVDQiX/ksxbELSqwkgt4d4RD7fovIdgJGSuNYqwZEiVjYY5l0ask+Q==" + }, "currently-unhandled": { "version": "0.4.1", "resolved": "https://registry.npmjs.org/currently-unhandled/-/currently-unhandled-0.4.1.tgz", @@ -7174,6 +7193,11 @@ "resolved": "https://registry.npmjs.org/fs.realpath/-/fs.realpath-1.0.0.tgz", "integrity": "sha1-FQStJSMVjKpA20onh8sBQRmU6k8=" }, + "fscreen": { + "version": "1.0.2", + "resolved": "https://registry.npmjs.org/fscreen/-/fscreen-1.0.2.tgz", + "integrity": "sha1-xMUdltgZ11oZ1yjg30Rfm+m7mE8=" + }, "fsevents": { "version": "1.2.7", "resolved": "https://registry.npmjs.org/fsevents/-/fsevents-1.2.7.tgz", @@ -14441,6 +14465,11 @@ } } }, + "react-aspect-ratio": { + "version": "1.0.42", + "resolved": "https://registry.npmjs.org/react-aspect-ratio/-/react-aspect-ratio-1.0.42.tgz", + "integrity": "sha512-TlDS7GZ6Fot6yMo1OYWrcxI/cggGsU4xsfXLastv6FfcZq0e99LeMq+OUbrlEjtOzi00QzNvkoj5T2vDqJNAmw==" + }, "react-base16-styling": { "version": "0.5.3", "resolved": "https://registry.npmjs.org/react-base16-styling/-/react-base16-styling-0.5.3.tgz", @@ -14738,6 +14767,20 @@ } } }, + "react-full-screen": { + "version": "0.2.4", + "resolved": "https://registry.npmjs.org/react-full-screen/-/react-full-screen-0.2.4.tgz", + "integrity": "sha512-K6V87g/uopQnnebg6/jM7VL3FcurgCIQU4nTkzknbjGOT9XOOxr3XVwRweI8QPn1TFRZH7j5OpHanUdk5uYlBQ==", + "requires": { + "@types/react": "*", + "fscreen": "^1.0.1" + } + }, + "react-fullscreen-image": { + "version": "0.0.3", + "resolved": "https://registry.npmjs.org/react-fullscreen-image/-/react-fullscreen-image-0.0.3.tgz", + "integrity": "sha512-A4zXvDox4WConU/qUpOKUCoRmV2mGi2DPTXNhG9I1x+W8WWwpKQMmrbWjLAe/UudhtpJRlebkIC3sPU6IHR3Nw==" + }, "react-fuzzy": { "version": "0.5.2", "resolved": "https://registry.npmjs.org/react-fuzzy/-/react-fuzzy-0.5.2.tgz", diff --git a/package.json b/package.json index eff3aa78..64045366 100644 --- a/package.json +++ b/package.json @@ -25,8 +25,11 @@ "prop-types": "^15.7.2", "react": "16.3.2", "react-apexcharts": "^1.3.3", + "react-aspect-ratio": "^1.0.42", "react-d3-tree": "^1.16.1", "react-dom": "16.3.3", + "react-full-screen": "^0.2.4", + "react-fullscreen-image": "0.0.3", "react-ga": "^2.6.0", "react-google-charts": "^2.0.29", "react-grid-system": "^6.0.3", diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 95880c33..f3f79c6c 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -30,7 +30,8 @@ import JobModelsTable from '../../components/explanation/JobModelsTable'; import TemporalStability from '../../components/explanation/TemporalStability'; import {temporalPredictionListRequested, temporalLimePredictionListRequested} from '../../actions/PredictionAction'; import VerticalBarChartCard from '../../components/chart/VerticalBarChartCard'; -import R3DecisionTree from '../../components/chart/R3DecisionTree'; +import viz from '../../viz.svg'; +import AspectRatio from 'react-aspect-ratio'; class Explanation extends Component { constructor(props) { @@ -133,10 +134,16 @@ class Explanation extends Component { labels = {iceResult.labels}>
+
+ + svg + +
- -
+ +G + + +cluster_legend + + + +node8 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +leaf9 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +node8->leaf9 + + + + + +leaf20 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +node8->leaf20 + + + + + +node2 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +node2->node8 + + + + + +node29 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +leaf3 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +node2->leaf3 + + + + + +node39 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +leaf40 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +node39->leaf40 + + + + + +leaf41 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +node39->leaf41 + + + + + +leaf42 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 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+node248->leaf249 + + + + + +node214->node215 + + + + + +node214->node248 + + + + + +node172->node173 + + + + + +node172->node214 + + + + + +node156->node157 + + + + + +node156->node172 + + + + + +node58->node59 + + + + + +node58->node156 + + + + + +node0 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +node0->node1 + + +< + + + +node0->node58 + + +≥ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +legend + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file From 3c99b74d4a1a95c5ba4e0859b534699597dd6e37 Mon Sep 17 00:00:00 2001 From: Musacca Date: Tue, 17 Mar 2020 13:41:03 +0200 Subject: [PATCH 10/29] Mock design for SHAP, Skater, ICE is ready --- package-lock.json | 46 +- package.json | 5 +- src/actions/ExplanationActions.js | 28 + src/actions/ServerActions.js | 36 + .../chart/HorizontalBarChartCard.js | 2 +- src/components/explanation/FairMLResult.js | 55 + src/components/explanation/ICEResult.js | 46 + src/components/explanation/ShapResult.js | 58 + src/components/explanation/SkaterResult.js | 42 + src/middlewares/ServerMiddleware.js | 10 +- src/mock_data/Template.js | 7 + src/mock_data/dependence_plot.png | Bin 0 -> 26054 bytes src/mock_data/explainer.html | 32 + src/mock_data/scratch.png | Bin 0 -> 18776 bytes src/mock_data/test.txt | 1128 + src/mock_data/viz.svg | 1 + src/reducers/Explanation.js | 0 src/util/dataReducers.js | 16 +- src/views/Explanation/Explanation.js | 46 +- src/viz.svg | 39004 ---------------- 20 files changed, 1527 insertions(+), 39035 deletions(-) create mode 100644 src/actions/ExplanationActions.js create mode 100644 src/components/explanation/FairMLResult.js create mode 100644 src/components/explanation/ICEResult.js create mode 100644 src/components/explanation/ShapResult.js create mode 100644 src/components/explanation/SkaterResult.js create mode 100644 src/mock_data/Template.js create mode 100644 src/mock_data/dependence_plot.png create mode 100644 src/mock_data/explainer.html create mode 100644 src/mock_data/scratch.png create mode 100644 src/mock_data/test.txt create mode 100644 src/mock_data/viz.svg create mode 100644 src/reducers/Explanation.js delete mode 100644 src/viz.svg diff --git a/package-lock.json b/package-lock.json index 6d739884..7f92c456 100644 --- a/package-lock.json +++ b/package-lock.json @@ -2246,6 +2246,14 @@ "integrity": "sha512-OtUw6JUTgxA2QoqqmrmQ7F2NYqiBPi/L2jqHyFtllhOUvXYQXf0Z1CYUinIfyT4bTCGmrA7gX9FvHA81uzCoVw==", "dev": true }, + "add-filename-increment": { + "version": "1.0.0", + "resolved": "https://registry.npmjs.org/add-filename-increment/-/add-filename-increment-1.0.0.tgz", + "integrity": "sha512-pFV8VZX8jxuVMIycKvGZkWF/ihnUubu9lbQVnOnZWp7noVxbKQTNj7zG2y9fXdPcuZ6lAN3Drr517HaivGCjdQ==", + "requires": { + "strip-filename-increment": "^2.0.1" + } + }, "address": { "version": "1.0.3", "resolved": "https://registry.npmjs.org/address/-/address-1.0.3.tgz", @@ -5613,6 +5621,11 @@ "domelementtype": "1" } }, + "dompurify": { + "version": "2.0.8", + "resolved": "https://registry.npmjs.org/dompurify/-/dompurify-2.0.8.tgz", + "integrity": "sha512-vIOSyOXkMx81ghEalh4MLBtDHMx1bhKlaqHDMqM2yeitJ996SLOk5mGdDpI9ifJAgokred8Rmu219fX4OltqXw==" + }, "domutils": { "version": "1.5.1", "resolved": "https://registry.npmjs.org/domutils/-/domutils-1.5.1.tgz", @@ -7017,6 +7030,17 @@ "graceful-fs": "^4.1.2", "rimraf": "~2.6.2", "write": "^0.2.1" + }, + "dependencies": { + "write": { + "version": "0.2.1", + "resolved": "https://registry.npmjs.org/write/-/write-0.2.1.tgz", + "integrity": "sha1-X8A4KOJkzqP+kUVUdvejxWbLB1c=", + "dev": true, + "requires": { + "mkdirp": "^0.5.1" + } + } } }, "flatten": { @@ -17857,6 +17881,11 @@ "integrity": "sha1-u0P/VZim6wXYm1n80SnJgzE2Br8=", "dev": true }, + "strip-filename-increment": { + "version": "2.0.1", + "resolved": "https://registry.npmjs.org/strip-filename-increment/-/strip-filename-increment-2.0.1.tgz", + "integrity": "sha512-+v5xsiTTsdYqkPj7qz1zlngIsjZedhHDi3xp/9bMurV8kXe9DAr732gNVqtt4X8sI3hOqS3nlFfps5gyVcux6w==" + }, "strip-indent": { "version": "1.0.1", "resolved": "https://registry.npmjs.org/strip-indent/-/strip-indent-1.0.1.tgz", @@ -17923,6 +17952,14 @@ "resolved": "https://registry.npmjs.org/supports-color/-/supports-color-2.0.0.tgz", "integrity": "sha1-U10EXOa2Nj+kARcIRimZXp3zJMc=" }, + "svg-inline-react": { + "version": "3.2.0", + "resolved": "https://registry.npmjs.org/svg-inline-react/-/svg-inline-react-3.2.0.tgz", + "integrity": "sha512-LofK2PJpIsvvi9lJdFe1RW3mhHPg4LvO/3Z1wEdz4Ksr/REPc+IW67i3Y3orGDk+qIa3LrTb0Rt6do8ClKriAw==", + "requires": { + "prop-types": "^15.5.0" + } + }, "svg-url-loader": { "version": "2.3.2", "resolved": "https://registry.npmjs.org/svg-url-loader/-/svg-url-loader-2.3.2.tgz", @@ -19882,12 +19919,11 @@ "integrity": "sha1-tSQ9jz7BqjXxNkYFvA0QNuMKtp8=" }, "write": { - "version": "0.2.1", - "resolved": "https://registry.npmjs.org/write/-/write-0.2.1.tgz", - "integrity": "sha1-X8A4KOJkzqP+kUVUdvejxWbLB1c=", - "dev": true, + "version": "2.0.0", + "resolved": "https://registry.npmjs.org/write/-/write-2.0.0.tgz", + "integrity": "sha512-yam9TAqN8sAZokECAejo9HpT2j2s39OgK8i8yxadrFBVo+iSWLfnipRVFulfAw1d2dz5vSuGmlMHYRKG4fysOA==", "requires": { - "mkdirp": "^0.5.1" + "add-filename-increment": "^1.0.0" } }, "write-file-atomic": { diff --git a/package.json b/package.json index 64045366..6b589cf4 100644 --- a/package.json +++ b/package.json @@ -19,6 +19,7 @@ }, "dependencies": { "apexcharts": "^3.10.1", + "dompurify": "^2.0.8", "graphviz-react": "^1.0.4", "loader-runner": "^3.0.0", "node-sass": "^4.12.0", @@ -42,9 +43,11 @@ "react-router-redux": "^4.0.8", "redux": "^3.6.0", "redux-thunk": "^2.2.0", + "svg-inline-react": "^3.2.0", "viz.js": "^1.8.0", "webfontloader": "^1.6.27", - "webpack": "^4.28.3" + "webpack": "^4.28.3", + "write": "^2.0.0" }, "scripts": { "start": "react-scripts start", diff --git a/src/actions/ExplanationActions.js b/src/actions/ExplanationActions.js new file mode 100644 index 00000000..79e48023 --- /dev/null +++ b/src/actions/ExplanationActions.js @@ -0,0 +1,28 @@ +import {createPayloadForwardingAction} from './index'; +export const LIME_VALUE_LIST_REQUESTED = 'LIME_VALUE_LIST_REQUESTED'; +export const limeValueListRequested = createPayloadForwardingAction(LIME_VALUE_LIST_REQUESTED); +export const LIME_VALUE_LIST_RETRIEVED = 'LIME_VALUE_LIST_RETRIEVED'; +export const limeValueListRetrieved = createPayloadForwardingAction(LIME_VALUE_LIST_RETRIEVED); +export const LIME_VALUE_LIST_FAILED = 'LIME_VALUE_LIST_FAILED'; +export const limeValueListFailed = createPayloadForwardingAction(LIME_VALUE_LIST_FAILED); + +export const ICE_VALUE_LIST_REQUESTED = 'ICE_VALUE_LIST_REQUESTED'; +export const iceValueListRequested = createPayloadForwardingAction(ICE_VALUE_LIST_REQUESTED); +export const ICE_VALUE_LIST_RETRIEVED = 'ICE_VALUE_LIST_RETRIEVED'; +export const iceValueListRetrieved = createPayloadForwardingAction(ICE_VALUE_LIST_RETRIEVED); +export const ICE_VALUE_LIST_FAILED = 'ICE_VALUE_LIST_FAILED'; +export const iceValueListFailed = createPayloadForwardingAction(ICE_VALUE_LIST_FAILED); + +export const SHAP_VALUE_LIST_REQUESTED = 'SHAP_VALUE_LIST_REQUESTED'; +export const shapValueListRequested = createPayloadForwardingAction(SHAP_VALUE_LIST_REQUESTED); +export const SHAP_VALUE_LIST_RETRIEVED = 'SHAP_VALUE_LIST_RETRIEVED'; +export const shapValueListRetrieved = createPayloadForwardingAction(SHAP_VALUE_LIST_RETRIEVED); +export const SHAP_VALUE_LIST_FAILED = 'SHAP_VALUE_LIST_FAILED'; +export const shapValueListFailed = createPayloadForwardingAction(SHAP_VALUE_LIST_FAILED); + +export const SKATER_VALUE_LIST_REQUESTED = 'SKATER_VALUE_LIST_REQUESTED'; +export const skaterValueListRequested = createPayloadForwardingAction(SKATER_VALUE_LIST_REQUESTED); +export const SKATER_VALUE_LIST_RETRIEVED = 'SKATER_VALUE_LIST_RETRIEVED'; +export const skaterValueListRetrieved = createPayloadForwardingAction(SKATER_VALUE_LIST_RETRIEVED); +export const SKATER_VALUE_LIST_FAILED = 'SKATER_VALUE_LIST_FAILED'; +export const skaterValueListFailed = createPayloadForwardingAction(SKATER_VALUE_LIST_FAILED); diff --git a/src/actions/ServerActions.js b/src/actions/ServerActions.js index b4d11f4a..e473fec9 100644 --- a/src/actions/ServerActions.js +++ b/src/actions/ServerActions.js @@ -141,6 +141,42 @@ export const getLimeValues = ({jobId, traceId}) => (dispatch) => { ); }; +export const getShapValues = ({jobId, traceId}) => (dispatch) => { + jsonAjax( + SERVER_URL + `/explanation/shap/${jobId}&${traceId}/`, + 'GET', + null, + (limeList) => { + dispatch(limeValueListRetrieved(limeList)); + }, + ({error}) => dispatch(limeValueListFailed(error)) + ); +}; + +export const getSkaterValues = ({jobId, traceId}) => (dispatch) => { + jsonAjax( + SERVER_URL + `/explanation/skater/${jobId}&${traceId}/`, + 'GET', + null, + (limeList) => { + dispatch(limeValueListRetrieved(limeList)); + }, + ({error}) => dispatch(limeValueListFailed(error)) + ); +}; + +export const getIceValues = ({jobId, traceId}) => (dispatch) => { + jsonAjax( + SERVER_URL + `/explanation/ice/${jobId}&${traceId}/`, + 'GET', + null, + (limeList) => { + dispatch(limeValueListRetrieved(limeList)); + }, + ({error}) => dispatch(limeValueListFailed(error)) + ); +}; + export const getLimeTemporalStabilityValues = ({jobId, traceId}) => (dispatch) => { jsonAjax( SERVER_URL + `/explanation/lime_temporal_stability/${jobId}&${traceId}/`, diff --git a/src/components/chart/HorizontalBarChartCard.js b/src/components/chart/HorizontalBarChartCard.js index fb29e1a4..e596977b 100644 --- a/src/components/chart/HorizontalBarChartCard.js +++ b/src/components/chart/HorizontalBarChartCard.js @@ -54,7 +54,7 @@ class HorizontalBarChartCard extends React.Component { axisTicks: { show: true }, - categories: this.props.labels + categories: this.props.labels, } }, series: [ diff --git a/src/components/explanation/FairMLResult.js b/src/components/explanation/FairMLResult.js new file mode 100644 index 00000000..ac4c2dba --- /dev/null +++ b/src/components/explanation/FairMLResult.js @@ -0,0 +1,55 @@ +import React, {PureComponent} from 'react'; +import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; +import PropTypes from 'prop-types'; +import SelectField from 'react-md/lib/SelectFields'; +import HorizontalBarChartCard from '../../components/chart/HorizontalBarChartCard'; +import {parseFairMLResult} from '../../util/dataReducers'; + +class ShapResult extends PureComponent { + constructor(props) { + super(props); + this.state = { + }; + } + getTraceSelector() { + return ( + + ); + } + + render() { + const fairMLResult = parseFairMLResult([{'label': 'Age_1', 'value': 0.5}, + {'label': 'CType_1', 'value': 0.5}, + {'label': 'ClType_1', 'value': 0.5}, + {'label': 'ClaimValue_1', 'value': 0.5}, + {'label': 'PClaims_1', 'value': 0.5}, + {'label': 'lifecycle:transition_1', 'value': 0.5}, + {'label': 'org:resource_1', 'value': 0.5}]); + const horizontalBarChart = ; + return ( +
+

FairML result

+
+

Select the prefix

+ {this.getTraceSelector()} +
+
{horizontalBarChart}
+ +
+ ); + } +} +ShapResult.propTypes = { + iceResult: PropTypes.any, + jobId: PropTypes.any, +}; +export default ShapResult; diff --git a/src/components/explanation/ICEResult.js b/src/components/explanation/ICEResult.js new file mode 100644 index 00000000..e2b581b0 --- /dev/null +++ b/src/components/explanation/ICEResult.js @@ -0,0 +1,46 @@ +import React, {PureComponent} from 'react'; +import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; +import PropTypes from 'prop-types'; +import VerticalBarChartCard from '../../components/chart/VerticalBarChartCard'; +import SelectField from 'react-md/lib/SelectFields'; + +class ShapResult extends PureComponent { + constructor(props) { + super(props); + this.state = { + }; + } + getTraceSelector() { + return ( + + ); + } + render() { + return ( +
+

ICE result

+
+

Select the prefix

+ {this.getTraceSelector()} +
+ + +
+ ); + } +} +ShapResult.propTypes = { + iceResult: PropTypes.any, + jobId: PropTypes.any, +}; +export default ShapResult; diff --git a/src/components/explanation/ShapResult.js b/src/components/explanation/ShapResult.js new file mode 100644 index 00000000..04367d8c --- /dev/null +++ b/src/components/explanation/ShapResult.js @@ -0,0 +1,58 @@ +import React, {PureComponent} from 'react'; +import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; +import PropTypes from 'prop-types'; +import {Row} from 'react-grid-system'; +import SelectField from 'react-md/lib/SelectFields'; +import scratch from '../../mock_data/scratch.png'; +import dependencePlot from '../../mock_data/dependence_plot.png'; + +class ShapResult extends PureComponent { + constructor(props) { + super(props); + this.state = { + }; + } + + getTraceSelector() { + return ( + + ); + } + render() { + return ( +
+ + + + svg + + + + +

Select the trace composition

+ {this.getTraceSelector()} + + svg + + +
+ ); + } +} +ShapResult.propTypes = { + shapGeneralResult: PropTypes.any.isRequired, + shapSpecificTraceIdResult: PropTypes.any.isRequired, + shapSummaryPlotResult: PropTypes.any.isRequired, + traceId: PropTypes.any, + jobId: PropTypes.any, + traceIdList: PropTypes.any.isRequired, + shapSelectedTrace: PropTypes.string.isRequired +}; +export default ShapResult; diff --git a/src/components/explanation/SkaterResult.js b/src/components/explanation/SkaterResult.js new file mode 100644 index 00000000..af84b411 --- /dev/null +++ b/src/components/explanation/SkaterResult.js @@ -0,0 +1,42 @@ +import React, {PureComponent} from 'react'; +import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; +import PropTypes from 'prop-types'; +import viz from '../../mock_data/viz.svg'; +import InlineSVG from 'svg-inline-react'; + +class ShapResult extends PureComponent { + constructor(props) { + super(props); + this.state = { + }; + } + + render() { + const svgSource = `\n\nG\n\n\ncluster_legend\n\n\n\nnode2\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nleaf3\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode2->leaf3\n\n\n\n\n\nleaf4\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode2->leaf4\n\n\n\n\n\nleaf5\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n\nnode1\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode1->node2\n\n\n\n\n\nnode1->leaf5\n\n\n\n\n\nleaf6\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n\nnode0\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode0->node1\n\n\n<\n\n\n\nnode0->leaf6\n\n\n≥\n\n\n\n\nlegend\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n`; + + return ( +
+
+

Skater result

+ this.showSvgNewPage(svgSource)} style={{display: 'flex', justifyContent:'center', alignItems:'center'}} href preserveAspectRatio="xMidYMid slice" className="md-cell md-cell--12" alt="svg" src={svgSource} /> + +
+
+ ); + } + + showSvgNewPage(svg){ + let v = window.open("") + v.document.write(svg) + } +} +ShapResult.propTypes = { + shapGeneralResult: PropTypes.any.isRequired, + shapSpecificTraceIdResult: PropTypes.any.isRequired, + shapSummaryPlotResult: PropTypes.any.isRequired, + traceId: PropTypes.any, + jobId: PropTypes.any, + traceIdList: PropTypes.any.isRequired, + shapSelectedTrace: PropTypes.string.isRequired +}; +export default ShapResult; diff --git a/src/middlewares/ServerMiddleware.js b/src/middlewares/ServerMiddleware.js index 2a60e1dd..8de4272c 100644 --- a/src/middlewares/ServerMiddleware.js +++ b/src/middlewares/ServerMiddleware.js @@ -12,12 +12,15 @@ import { postTraining, getLimeValues, getLimeTemporalStabilityValues, - getPredictionTemporalStabilityValues + getPredictionTemporalStabilityValues, + getShapValues, + getIceValues, + getSkaterValues } from '../actions/ServerActions'; import {JOB_DELETE_REQUESTED, JOBS_REQUESTED, TRAINING_SUBMITTED} from '../actions/JobActions'; import {TRACE_LIST_REQUESTED} from '../actions/TraceActions'; import {LOG_INFO_REQUESTED, LOG_LIST_REQUESTED} from '../actions/LogActions'; -import {LIME_VALUE_LIST_REQUESTED} from '../actions/LimeActions'; +import {LIME_VALUE_LIST_REQUESTED, SHAP_VALUE_LIST_REQUESTED, ICE_VALUE_LIST_REQUESTED, SKATER_VALUE_LIST_REQUESTED} from '../actions/ExplanationActions'; import {SPLIT_SUBMITTED, SPLITS_REQUESTED} from '../actions/SplitActions'; import {MODELS_REQUESTED} from '../actions/ModelActions'; import {PREDICTION_SUBMITTED, REPLAY_SUBMITTED} from '../actions/RuntimeActions'; @@ -37,6 +40,9 @@ const ACTION_TYPE_TO_SERVER_ACTION = { [MODELS_REQUESTED]: getModels, [JOB_DELETE_REQUESTED]: deleteJob, [LIME_VALUE_LIST_REQUESTED]: getLimeValues, + [SHAP_VALUE_LIST_REQUESTED]: getShapValues, + [ICE_VALUE_LIST_REQUESTED]: getIceValues, + [SKATER_VALUE_LIST_REQUESTED]: getSkaterValues, [TEMPORAL_STABILITY_LIME_PREDICTION_LIST_REQUESTED]: getLimeTemporalStabilityValues, [TEMPORAL_STABILITY_PREDICTION_LIST_REQUESTED]: getPredictionTemporalStabilityValues, diff --git a/src/mock_data/Template.js b/src/mock_data/Template.js new file mode 100644 index 00000000..025a5960 --- /dev/null +++ b/src/mock_data/Template.js @@ -0,0 +1,7 @@ +import React from 'react'; +let Template = React.createReactClass({ + render: function () { + return (
Mi HTML
); + } +}); +module.exports = Template; diff --git a/src/mock_data/dependence_plot.png b/src/mock_data/dependence_plot.png new file mode 100644 index 0000000000000000000000000000000000000000..83c4717d1f0fdfcf994b829208c346d82b38e6bd GIT binary patch literal 26054 zcmeFZcRbd8-#>n6X^57FSrMXAO37@?$lf!vkX1&J(KH&ek}Z)<%9c@9lw`{;NwyNQ zf6q7Pd0qE)-Pe6T9^c>i@7MV_ABw|qd_M2-dOg?s;~^&_zIHXkY6^w2R^sd_1qx-! z5QReZd*upzM?Whz9$%JSIU%965`V6*G<3(mS6Q7^ze1tV>5>1bV#Q)i@J#`m(`q(~ zmc};rdY6qT=6W_(mn>~Andon~GrD}m#M0v6z61OC_H4gsV`C-A%lprt@3Xvofp^!v zr;-%Pc8bKQ<4RXU2HG68{EX)2e@<-Y?2hQtXWh0F#Rl*bxA$;kiI@?NxuXM-0(&Eci%K!hX|1S*_*9A9PW(6&+5RFWW zy_S}i=@+XbmAW?X)riU+&eu#gt@kN6tO?>bV;UE7p2-@@9Tr`_e0iL4We~#w{o5~J zzVsYxd7*bpBi(eDi;K%0H#eRgJH8a;?919r=Iz+g>AC6Qbdy?+J9qB%KGw9@J(kt| zKA`_Y;K9Dy7+DXeeY*LH?Rk#{Og$j7;-O zqkAk@JE=r|y<^)o$48mCz(-SLWxEbbq0u)oa_6;cvl*g-mzwquetsoBJwC`YCUCDL z^2`H<-3JcH&rVNd_K&tZ4x5a0zG*ISDX_?&G?u8zFmI{LwYMB>PL~>N$qZm08*0-$ zdi3bj%xIOl0rgsjs65AsJ~vipt`w=$%k@jJHX}l`C7M%8vi53baPjfgJWi8Rke0r0 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+
+ Visualization omitted, Javascript library not loaded!
+ Have you run `initjs()` in this notebook? If this notebook was from another + user you must also trust this notebook (File -> Trust notebook). If you are viewing + this notebook on github the Javascript has been stripped for security. If you are using + JupyterLab this error is because a JupyterLab extension has not yet been written. +
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\n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + "\n", + "\n", + "" \ No newline at end of file diff --git a/src/mock_data/viz.svg b/src/mock_data/viz.svg new file mode 100644 index 00000000..f906151f --- /dev/null +++ b/src/mock_data/viz.svg @@ -0,0 +1 @@ +\n\nG\n\n\ncluster_legend\n\n\n\nnode2\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nleaf3\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode2->leaf3\n\n\n\n\n\nleaf4\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode2->leaf4\n\n\n\n\n\nleaf5\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n\nnode1\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode1->node2\n\n\n\n\n\nnode1->leaf5\n\n\n\n\n\nleaf6\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n\nnode0\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode0->node1\n\n\n<\n\n\n\nnode0->leaf6\n\n\n≥\n\n\n\n\nlegend\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n \ No newline at end of file diff --git a/src/reducers/Explanation.js b/src/reducers/Explanation.js new file mode 100644 index 00000000..e69de29b diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index e5bf6082..670cc282 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -288,8 +288,20 @@ export const parseICEResult = (iceResult) => { let values = []; let count = []; for (let j = 0; j < iceResult.length; j++) { - labels.push(iceResult[j].value); - values.push(iceResult[j].label - 1).toFixed(2); + labels.push(iceResult[j].label); + values.push(iceResult[j].value - 1).toFixed(2); + count.push(iceResult[j].count | 0); + } + return ({labels: labels, values: values, count: count}); +}; + +export const parseFairMLResult = (iceResult) => { + let labels = []; + let values = []; + let count = []; + for (let j = 0; j < iceResult.length; j++) { + labels.push(iceResult[j].label); + values.push(iceResult[j].value).toFixed(2); count.push(iceResult[j].count | 0); } return ({labels: labels, values: values, count: count}); diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index f3f79c6c..be02ac54 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -29,9 +29,12 @@ import {getTraceIdsFromLogs, parseLimeResult, parseICEResult} from '../../util/d import JobModelsTable from '../../components/explanation/JobModelsTable'; import TemporalStability from '../../components/explanation/TemporalStability'; import {temporalPredictionListRequested, temporalLimePredictionListRequested} from '../../actions/PredictionAction'; -import VerticalBarChartCard from '../../components/chart/VerticalBarChartCard'; -import viz from '../../viz.svg'; -import AspectRatio from 'react-aspect-ratio'; +import ShapResult from '../../components/explanation/ShapResult'; +import ICEResult from '../../components/explanation/ICEResult'; +import SkaterResult from '../../components/explanation/SkaterResult'; +import FairMLResult from '../../components/explanation/FairMLResult'; +import {Row} from 'react-grid-system'; +import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; class Explanation extends Component { constructor(props) { @@ -108,7 +111,7 @@ class Explanation extends Component { render() { // eslint-disable-next-line max-len - const iceResult = parseICEResult([{'value': 'First outpatient consultation', 'label': 1.25, 'count': 48}, {'value': 'aspiration cytology behalf by p', 'label': 1.6666666666666667, 'count': 3}, {'value': 'assumption laboratory', 'label': 1.6923076923076923, 'count': 130}, {'value': 'compartment for inspection', 'label': 1.6666666666666667, 'count': 12}, {'value': 'ct abdomen', 'label': 2.0, 'count': 2}, {'value': 'cytology - abdominal tumor puncture', 'label': 1.0, 'count': 1}, {'value': 'cytology - ectocervix -', 'label': 1.32, 'count': 25}, {'value': 'cytology - vagina -', 'label': 1.2222222222222223, 'count': 9}, {'value': 'day care - all spec.beh.kind.-rev.', 'label': 1.0, 'count': 2}, {'value': 'demurrage - all spec.beh.kinderg.-Reval.', 'label': 1.7142857142857142, 'count': 28}, {'value': 'e.c.g. - Electrocardiography', 'label': 1.5, 'count': 22}, {'value': 'histological examination - biopsies nno', 'label': 1.3076923076923077, 'count': 13}, {'value': 'immuno-pathology', 'label': 1.25, 'count': 4}, {'value': 'inwend.geneesk. Out-year card costs', 'label': 2.0, 'count': 1}, {'value': 'inwend.geneesk. short-out card cost', 'label': 1.375, 'count': 8}, {'value': 'mammography chest wall', 'label': 1.3333333333333333, 'count': 3}, {'value': 'outpatient follow-up consultation', 'label': 1.087719298245614, 'count': 228}, {'value': 'telephone consultation', 'label': 1.0769230769230769, 'count': 13}, {'value': 'thorax', 'label': 1.375, 'count': 8}, {'value': 'treatment time - Unit t2 - megavolt', 'label': 1.0, 'count': 1}, {'value': 'treatment time - Unit t3 - megavolt', 'label': 1.0, 'count': 1}, {'value': 'ultrasound - internal genitals', 'label': 1.6333333333333333, 'count': 30}] + const iceResult = parseICEResult([{'label': 'First outpatient consultation', 'value': 1.25, 'count': 48}, {'label': 'aspiration cytology behalf by p', 'value': 1.6666666666666667, 'count': 3}, {'label': 'assumption laboratory', 'value': 1.6923076923076923, 'count': 130}, {'label': 'compartment for inspection', 'value': 1.6666666666666667, 'count': 12}, {'label': 'ct abdomen', 'value': 2.0, 'count': 2}, {'label': 'cytology - abdominal tumor puncture', 'value': 1.0, 'count': 1}, {'label': 'cytology - ectocervix -', 'value': 1.32, 'count': 25}, {'label': 'cytology - vagina -', 'value': 1.2222222222222223, 'count': 9}, {'label': 'day care - all spec.beh.kind.-rev.', 'value': 1.0, 'count': 2}, {'label': 'demurrage - all spec.beh.kinderg.-Reval.', 'value': 1.7142857142857142, 'count': 28}, {'label': 'e.c.g. - Electrocardiography', 'value': 1.5, 'count': 22}, {'label': 'histological examination - biopsies nno', 'value': 1.3076923076923077, 'count': 13}, {'label': 'immuno-pathology', 'value': 1.25, 'count': 4}, {'label': 'inwend.geneesk. Out-year card costs', 'value': 2.0, 'count': 1}, {'label': 'inwend.geneesk. short-out card cost', 'value': 1.375, 'count': 8}, {'label': 'mammography chest wall', 'value': 1.3333333333333333, 'count': 3}, {'label': 'outpatient follow-up consultation', 'value': 1.087719298245614, 'count': 228}, {'label': 'telephone consultation', 'value': 1.0769230769230769, 'count': 13}, {'label': 'thorax', 'value': 1.375, 'count': 8}, {'label': 'treatment time - Unit t2 - megavolt', 'value': 1.0, 'count': 1}, {'label': 'treatment time - Unit t3 - megavolt', 'value': 1.0, 'count': 1}, {'label': 'ultrasound - internal genitals', 'value': 1.6333333333333333, 'count': 30}] ); return (
    @@ -127,22 +130,7 @@ class Explanation extends Component { {/*
    */} -
    - - -
    -
    - - svg - - -
    +
    + + + + +
    + + + + + + + + +
    +
    + +
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - \ No newline at end of file From c5807775e21abc7d3463d68e1b930cefbe03e4af Mon Sep 17 00:00:00 2001 From: Musacca Date: Thu, 19 Mar 2020 16:29:22 +0200 Subject: [PATCH 11/29] ICE and Decoded dataframe table is ready --- src/actions/JobActions.js | 8 + src/actions/ServerActions.js | 41 ++-- src/components/chart/VerticalBarChartCard.js | 2 +- src/components/explanation/DecodedDFTable.js | 94 +++++++++ src/components/explanation/ICEResult.js | 52 +++-- src/components/explanation/IceResultTable.js | 81 ++++++++ src/components/explanation/JobModelsTable.js | 2 +- src/components/explanation/ShapResult.js | 62 +++--- src/components/explanation/SkaterResult.js | 41 ++-- src/components/explanation/post_hoc.js | 8 +- src/middlewares/ServerMiddleware.js | 10 +- src/reducers/Explanation.js | 155 +++++++++++++++ src/reducers/Jobs.js | 35 +++- src/reducers/index.js | 4 +- src/util/dataReducers.js | 48 ++++- src/views/Explanation/Explanation.js | 197 +++++++++++++------ 16 files changed, 681 insertions(+), 159 deletions(-) create mode 100644 src/components/explanation/DecodedDFTable.js create mode 100644 src/components/explanation/IceResultTable.js diff --git a/src/actions/JobActions.js b/src/actions/JobActions.js index 0228fde0..2aaa0976 100644 --- a/src/actions/JobActions.js +++ b/src/actions/JobActions.js @@ -21,6 +21,14 @@ export const trainingSucceeded = createPayloadForwardingAction(TRAINING_SUCCEEDE export const TRAINING_FAILED = 'TRAINING_FAILED'; export const trainingFailed = createPayloadForwardingAction(TRAINING_FAILED); + +export const DECODING_REQUESTED = 'DECODING_REQUESTED'; +export const decodingRequested = createPayloadForwardingAction(DECODING_REQUESTED); +export const DECODING_RETRIEVED = 'DECODING_RETRIEVED'; +export const decodingtRetrieved = createPayloadForwardingAction(DECODING_RETRIEVED); +export const DECODING_FAILED = 'DECODING_FAILED'; +export const decodingFailed = createPayloadForwardingAction(DECODING_FAILED); + export const FILTER_SPLIT_CHANGED = 'FILTER_SPLIT_CHANGED'; export const PREDICTION_SPLIT_CHANGED = 'PREDICTION_SPLIT_CHANGED'; export const REPLAY_SPLIT_CHANGED = 'REPLAY_SPLIT_CHANGED'; diff --git a/src/actions/ServerActions.js b/src/actions/ServerActions.js index e473fec9..3e1b7fea 100644 --- a/src/actions/ServerActions.js +++ b/src/actions/ServerActions.js @@ -1,6 +1,6 @@ import {SERVER_URL} from '../constants'; import jsonAjax from '../JSONAjaxRequest'; -import {JOB_DELETED, jobsFailed, jobsRetrieved, trainingFailed, trainingSucceeded} from './JobActions'; +import {JOB_DELETED, jobsFailed, jobsRetrieved, trainingFailed, trainingSucceeded, decodingtRetrieved, decodingFailed} from './JobActions'; import {logInfoFailed, logInfoRetrieved, logListFailed, logListsRetrieved} from './LogActions'; import {traceListFailed, traceListRetrieved} from './TraceActions'; import {limeValueListFailed, limeValueListRetrieved} from './LimeActions'; @@ -9,6 +9,7 @@ import {modelsFailed, modelsRetrieved} from './ModelActions'; import {predictionFailed, predictionSucceeded, replayFailed, replaySucceeded} from './RuntimeActions'; import {temporalLimePredictionListRetrieved, temporalLimePredictionListFailed, temporalPredictionListRetrieved, temporalPredictionListFailed} from './PredictionAction'; +import { shapValueListRetrieved, shapValueListFailed, skaterValueListRetrieved, skaterValueListFailed, iceValueListRequested, iceValueListFailed, iceValueListRetrieved } from './ExplanationActions'; export const getJobs = () => (dispatch) => { jsonAjax( @@ -54,6 +55,18 @@ export const postTraining = (payload) => (dispatch) => { ); }; +export const getDecodingDf = ({id}) => (dispatch) => { + jsonAjax( + SERVER_URL + `/jobs/decode/${id}`, + 'GET', + null, + (resultList) => { + dispatch(decodingtRetrieved(resultList)); + }, + ({error}) => dispatch(decodingFailed(error)) + ); +}; + export const getSplits = () => (dispatch) => { jsonAjax( SERVER_URL + '/splits/', @@ -146,34 +159,34 @@ export const getShapValues = ({jobId, traceId}) => (dispatch) => { SERVER_URL + `/explanation/shap/${jobId}&${traceId}/`, 'GET', null, - (limeList) => { - dispatch(limeValueListRetrieved(limeList)); + (shapResult) => { + dispatch(shapValueListRetrieved(shapResult)); }, - ({error}) => dispatch(limeValueListFailed(error)) + ({error}) => dispatch(shapValueListFailed(error)) ); }; -export const getSkaterValues = ({jobId, traceId}) => (dispatch) => { +export const getSkaterValues = ({jobId}) => (dispatch) => { jsonAjax( - SERVER_URL + `/explanation/skater/${jobId}&${traceId}/`, + SERVER_URL + `/explanation/skater/${jobId}/`, 'GET', null, - (limeList) => { - dispatch(limeValueListRetrieved(limeList)); + (skaterResult) => { + dispatch(skaterValueListRetrieved(skaterResult)); }, - ({error}) => dispatch(limeValueListFailed(error)) + ({error}) => dispatch(skaterValueListFailed(error)) ); }; -export const getIceValues = ({jobId, traceId}) => (dispatch) => { +export const getIceValues = ({jobId, attribute}) => (dispatch) => { jsonAjax( - SERVER_URL + `/explanation/ice/${jobId}&${traceId}/`, + SERVER_URL + `/explanation/ice/${jobId}&${attribute}/`, 'GET', null, - (limeList) => { - dispatch(limeValueListRetrieved(limeList)); + (iceList) => { + dispatch(iceValueListRetrieved(iceList)); }, - ({error}) => dispatch(limeValueListFailed(error)) + ({error}) => dispatch(iceValueListFailed(error)) ); }; diff --git a/src/components/chart/VerticalBarChartCard.js b/src/components/chart/VerticalBarChartCard.js index 8fed5d7a..ce28b321 100644 --- a/src/components/chart/VerticalBarChartCard.js +++ b/src/components/chart/VerticalBarChartCard.js @@ -21,7 +21,7 @@ class HorizontalBarChartCard extends React.Component { bar: { horizontal: false, distributed: false, - columnWidth: '30%', + columnWidth: '10%', barHeight: '80%' } }, diff --git a/src/components/explanation/DecodedDFTable.js b/src/components/explanation/DecodedDFTable.js new file mode 100644 index 00000000..cfd8bd7d --- /dev/null +++ b/src/components/explanation/DecodedDFTable.js @@ -0,0 +1,94 @@ +import React, {PureComponent} from 'react'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import PropTypes from 'prop-types'; +import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; + +class IceResultTable extends PureComponent { + constructor(props) { + super(props); + this.state = { + values: this.props.values.slice(0, 10), + }; + } + + handlePagination(start, rowsPerPage) { + this.setState({ + values: this.props.values.slice(start, start + rowsPerPage) + }); + } + + componentDidUpdate(prevProps) { + if (prevProps.values.length !== this.props.values.length) { + this.setState({values: this.props.values.slice(0, 10)}); + } + } + + getHeaderColumns(headers) { + return headers.map(header => { + let grow = false; + if (header === 'Configuration') { + grow = true; + } + return ( + + {' '} + {header} + + ); + }); + } + + getDecodedDFValuesTable(values) { + return ( + + + + {this.props.jobId != '' ? + 'Decoded dataframe result with job id: '+ this.props.jobId: ''} + + {!this.props.isDecodedValueLoaded ? : null} + + + + + {this.getHeaderColumns(this.props.headers)} + + + + {values.map( + (value, index) => ( + + {value.map( + (v) => ( + {v} + ) + )} + + ) + )} + + + + + + ); + } + render() { + return
    + {this.getDecodedDFValuesTable(this.state.values)} +
    ; + } +} + +IceResultTable.propTypes = { + values: PropTypes.array.isRequired, + headers: PropTypes.array.isRequired, + isDecodedValueLoaded: PropTypes.bool.isRequired, + jobId: PropTypes.any.isRequired, +}; + +export default IceResultTable; diff --git a/src/components/explanation/ICEResult.js b/src/components/explanation/ICEResult.js index e2b581b0..17c3cb75 100644 --- a/src/components/explanation/ICEResult.js +++ b/src/components/explanation/ICEResult.js @@ -3,6 +3,8 @@ import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; import PropTypes from 'prop-types'; import VerticalBarChartCard from '../../components/chart/VerticalBarChartCard'; import SelectField from 'react-md/lib/SelectFields'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; +import IceResultTable from './IceResultTable'; class ShapResult extends PureComponent { constructor(props) { @@ -10,37 +12,57 @@ class ShapResult extends PureComponent { this.state = { }; } + onChangeFeature(value, _) { + this.props.onChangeFeature(value); + } getTraceSelector() { return ( ); } render() { return ( -
    -

    ICE result

    -
    -

    Select the prefix

    - {this.getTraceSelector()} -
    + + + +

    Select the feature

    + {this.getTraceSelector()} +     + {!this.props.isIceValuesLoaded ? : null} + + {this.props.iceValueList.count.length != 0 ? + this.props.iceValueList.count.length < 70 ? + labels = {this.props.iceValueList.values} + count = {this.props.iceValueList.count} + data = {this.props.iceValueList.labels}> -
    + : + + + : null + } + + ); } } ShapResult.propTypes = { - iceResult: PropTypes.any, - jobId: PropTypes.any, + iceValueList: PropTypes.any, + jobId: PropTypes.any, + isIceValuesLoaded: PropTypes.bool, + selectedAttribute: PropTypes.any, + attributes: PropTypes.any, + onChangeFeature: PropTypes.func, + originalList: PropTypes.any }; export default ShapResult; diff --git a/src/components/explanation/IceResultTable.js b/src/components/explanation/IceResultTable.js new file mode 100644 index 00000000..ef82ffe1 --- /dev/null +++ b/src/components/explanation/IceResultTable.js @@ -0,0 +1,81 @@ +import React, {PureComponent} from 'react'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import PropTypes from 'prop-types'; +import {getIceResultListTable} from '../../util/dataReducers'; + +class IceResultTable extends PureComponent { + constructor(props) { + super(props); + this.state = { + features: this.props.iceResultList.slice(0, 10), + }; + } + + handlePagination(start, rowsPerPage) { + this.setState({ + features: this.props.iceResultList.slice(start, start + rowsPerPage) + }); + } + + componentDidUpdate(prevProps) { + if (prevProps.iceResultList.length !== this.props.iceResultList.length) { + this.setState({features: this.props.iceResultList.slice(0, 10)}); + } + } + + getHeaderColumns(headers) { + return headers.map(header => { + let grow = false; + if (header === 'Configuration') { + grow = true; + } + return ( + + {' '} + {header} + + ); + }); + } + + getPrefixValuesTable(values) { + return ( + + + + {this.getHeaderColumns(['label', 'value', 'count'])} + + + + {values.map( + (value, index) => ( + + {value.map( + (v) => ( + {v} + ) + )} + + ) + )} + + + + ); + } + render() { + return
    + {this.getPrefixValuesTable(getIceResultListTable(this.state.features))} +
    ; + } +} + +IceResultTable.propTypes = { + iceResultList: PropTypes.array.isRequired, +}; + +export default IceResultTable; diff --git a/src/components/explanation/JobModelsTable.js b/src/components/explanation/JobModelsTable.js index aca356d9..b2ce77f1 100644 --- a/src/components/explanation/JobModelsTable.js +++ b/src/components/explanation/JobModelsTable.js @@ -23,7 +23,7 @@ const JobModelsTable = (props) => { - ); - } render() { return ( -
    - - - - svg - - - - -

    Select the trace composition

    - {this.getTraceSelector()} -     - svg -     -     -
    + + + + { this.props.traceId != '' && this.props.jobId != '' ? + 'SHAP result with trace id: '+ this.props.traceId + +' and job id: '+ this.props.jobId: ''} + + + {!this.props.isShapValuesLoaded ? : null} + {JSON.stringify(this.props.shapValueList) !='{}'? + : null} + + ); } } ShapResult.propTypes = { - shapGeneralResult: PropTypes.any.isRequired, - shapSpecificTraceIdResult: PropTypes.any.isRequired, - shapSummaryPlotResult: PropTypes.any.isRequired, - traceId: PropTypes.any, - jobId: PropTypes.any, - traceIdList: PropTypes.any.isRequired, - shapSelectedTrace: PropTypes.string.isRequired + shapValueList: PropTypes.any.isRequired, + traceId: PropTypes.any, + jobId: PropTypes.any, + shapSelectedTrace: PropTypes.string.isRequired, + isShapValuesLoaded: PropTypes.bool.isRequired, }; export default ShapResult; diff --git a/src/components/explanation/SkaterResult.js b/src/components/explanation/SkaterResult.js index af84b411..4bf28559 100644 --- a/src/components/explanation/SkaterResult.js +++ b/src/components/explanation/SkaterResult.js @@ -3,6 +3,7 @@ import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; import PropTypes from 'prop-types'; import viz from '../../mock_data/viz.svg'; import InlineSVG from 'svg-inline-react'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; class ShapResult extends PureComponent { constructor(props) { @@ -12,31 +13,35 @@ class ShapResult extends PureComponent { } render() { - const svgSource = `\n\nG\n\n\ncluster_legend\n\n\n\nnode2\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nleaf3\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode2->leaf3\n\n\n\n\n\nleaf4\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode2->leaf4\n\n\n\n\n\nleaf5\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n\nnode1\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode1->node2\n\n\n\n\n\nnode1->leaf5\n\n\n\n\n\nleaf6\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n\nnode0\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode0->node1\n\n\n<\n\n\n\nnode0->leaf6\n\n\n≥\n\n\n\n\nlegend\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n`; - return ( -
    -
    -

    Skater result

    - this.showSvgNewPage(svgSource)} style={{display: 'flex', justifyContent:'center', alignItems:'center'}} href preserveAspectRatio="xMidYMid slice" className="md-cell md-cell--12" alt="svg" src={svgSource} /> - + +
    +
    + + {!this.props.isSkaterValuesLoaded ? + : null} + + {JSON.stringify(this.props.skaterValueList) !='{}'? + this.showSvgNewPage(this.props.skaterValueList)} + style={{display: 'flex', justifyContent: 'center', alignItems: 'center'}} + href preserveAspectRatio="xMidYMid slice" + alt="svg" src={this.props.skaterValueList}/> + : null} + +
    -
    + ); } - - showSvgNewPage(svg){ - let v = window.open("") - v.document.write(svg) + showSvgNewPage(svg) { + let v = window.open(''); + v.document.write(svg); } } ShapResult.propTypes = { - shapGeneralResult: PropTypes.any.isRequired, - shapSpecificTraceIdResult: PropTypes.any.isRequired, - shapSummaryPlotResult: PropTypes.any.isRequired, + skaterValueList: PropTypes.any.isRequired, traceId: PropTypes.any, - jobId: PropTypes.any, - traceIdList: PropTypes.any.isRequired, - shapSelectedTrace: PropTypes.string.isRequired + isSkaterValuesLoaded: PropTypes.bool.isRequired }; export default ShapResult; diff --git a/src/components/explanation/post_hoc.js b/src/components/explanation/post_hoc.js index 586f1634..485d3a87 100644 --- a/src/components/explanation/post_hoc.js +++ b/src/components/explanation/post_hoc.js @@ -15,8 +15,9 @@ const PostHocExplanation = (props) => { return - {!props.isLimeValuesLoaded ? 'Lime result with trace id: '+ props.traceId +' is loading. Please wait...' : - 'Lime result with trace id: '+ props.traceId} + {props.traceId != '' && props.jobId != '' ? + 'Lime result with trace id: '+ props.traceId + +' and job id: '+ props.jobId: ''} {!props.isLimeValuesLoaded ? : null} @@ -32,7 +33,8 @@ PostHocExplanation.propTypes = { jobs: PropTypes.arrayOf(jobPropType).isRequired, limeValueList: PropTypes.any.isRequired, isLimeValuesLoaded: PropTypes.bool.isRequired, - traceId: PropTypes.any + traceId: PropTypes.any, + jobId: PropTypes.any }; export default PostHocExplanation; diff --git a/src/middlewares/ServerMiddleware.js b/src/middlewares/ServerMiddleware.js index 8de4272c..3c27e885 100644 --- a/src/middlewares/ServerMiddleware.js +++ b/src/middlewares/ServerMiddleware.js @@ -15,12 +15,14 @@ import { getPredictionTemporalStabilityValues, getShapValues, getIceValues, - getSkaterValues + getSkaterValues, + getDecodingDf } from '../actions/ServerActions'; -import {JOB_DELETE_REQUESTED, JOBS_REQUESTED, TRAINING_SUBMITTED} from '../actions/JobActions'; +import {JOB_DELETE_REQUESTED, JOBS_REQUESTED, TRAINING_SUBMITTED, DECODING_REQUESTED} from '../actions/JobActions'; import {TRACE_LIST_REQUESTED} from '../actions/TraceActions'; import {LOG_INFO_REQUESTED, LOG_LIST_REQUESTED} from '../actions/LogActions'; -import {LIME_VALUE_LIST_REQUESTED, SHAP_VALUE_LIST_REQUESTED, ICE_VALUE_LIST_REQUESTED, SKATER_VALUE_LIST_REQUESTED} from '../actions/ExplanationActions'; +import {LIME_VALUE_LIST_REQUESTED, SHAP_VALUE_LIST_REQUESTED, + ICE_VALUE_LIST_REQUESTED, SKATER_VALUE_LIST_REQUESTED} from '../actions/ExplanationActions'; import {SPLIT_SUBMITTED, SPLITS_REQUESTED} from '../actions/SplitActions'; import {MODELS_REQUESTED} from '../actions/ModelActions'; import {PREDICTION_SUBMITTED, REPLAY_SUBMITTED} from '../actions/RuntimeActions'; @@ -45,7 +47,7 @@ const ACTION_TYPE_TO_SERVER_ACTION = { [SKATER_VALUE_LIST_REQUESTED]: getSkaterValues, [TEMPORAL_STABILITY_LIME_PREDICTION_LIST_REQUESTED]: getLimeTemporalStabilityValues, [TEMPORAL_STABILITY_PREDICTION_LIST_REQUESTED]: getPredictionTemporalStabilityValues, - + [DECODING_REQUESTED]: getDecodingDf, }; const serverMiddleware = (store) => (next) => (action) => { diff --git a/src/reducers/Explanation.js b/src/reducers/Explanation.js index e69de29b..6c1d3270 100644 --- a/src/reducers/Explanation.js +++ b/src/reducers/Explanation.js @@ -0,0 +1,155 @@ +import { + LIME_VALUE_LIST_FAILED, + LIME_VALUE_LIST_REQUESTED, + LIME_VALUE_LIST_RETRIEVED, + + SHAP_VALUE_LIST_FAILED, + SHAP_VALUE_LIST_REQUESTED, + SHAP_VALUE_LIST_RETRIEVED, + + SKATER_VALUE_LIST_FAILED, + SKATER_VALUE_LIST_REQUESTED, + SKATER_VALUE_LIST_RETRIEVED, + + ICE_VALUE_LIST_FAILED, + ICE_VALUE_LIST_REQUESTED, + ICE_VALUE_LIST_RETRIEVED +} from '../actions/ExplanationActions'; + +const initialState = { + fetchState: {inFlight: false}, + limeValueList: {}, + shapValueList: {}, + iceValueList: {}, + skaterValueList: {}, + isLimeValuesLoaded: true, + isShapValuesLoaded: true, + isSkaterValuesLoaded: true, + isIceValuesLoaded: true, +}; + +const explanation = (state = initialState, action) => { + switch (action.type) { + case LIME_VALUE_LIST_REQUESTED: { + return { + ...state, + fetchState: {inFlight: true}, + isLimeValuesLoaded: false, + + }; + } + + case LIME_VALUE_LIST_RETRIEVED: { + const limeValueList = action.payload; + return { + ...state, + fetchState: {inFlight: false}, + limeValueList, + isLimeValuesLoaded: true + }; + } + + case LIME_VALUE_LIST_FAILED: { + const limeValueList = initialState.limeValueList; + return { + ...state, + fetchState: {inFlight: false, error: action.payload}, + limeValueList, + isLimeValuesLoaded: true + }; + } + + case SHAP_VALUE_LIST_REQUESTED: { + return { + ...state, + fetchState: {inFlight: true}, + isShapValuesLoaded: false, + + }; + } + + case SHAP_VALUE_LIST_RETRIEVED: { + const shapValueList = action.payload[1]; + return { + ...state, + fetchState: {inFlight: false}, + shapValueList, + isShapValuesLoaded: true + }; + } + + case SHAP_VALUE_LIST_FAILED: { + const shapValueList = initialState.shapValueList; + return { + ...state, + fetchState: {inFlight: false, error: action.payload}, + shapValueList, + isShapValuesLoaded: true + }; + } + + case SKATER_VALUE_LIST_REQUESTED: { + return { + ...state, + fetchState: {inFlight: true}, + isSkaterValuesLoaded: false, + + }; + } + + case SKATER_VALUE_LIST_RETRIEVED: { + const skaterValueList = action.payload[1]; + return { + ...state, + fetchState: {inFlight: false}, + skaterValueList, + isSkaterValuesLoaded: true + }; + } + + case SKATER_VALUE_LIST_FAILED: { + const skaterValueList = initialState.limeValueList; + return { + ...state, + fetchState: {inFlight: false, error: action.payload}, + skaterValueList, + isSkaterValuesLoaded: true + }; + } + + case ICE_VALUE_LIST_REQUESTED: { + return { + ...state, + fetchState: {inFlight: true}, + isIceValuesLoaded: false, + + }; + } + + case ICE_VALUE_LIST_RETRIEVED: { + const iceValueList = action.payload[1]; + return { + ...state, + fetchState: {inFlight: false}, + iceValueList, + isIceValuesLoaded: true + }; + } + + case ICE_VALUE_LIST_FAILED: { + const iceValueList = initialState.limeValueList; + return { + ...state, + fetchState: {inFlight: false, error: action.payload}, + iceValueList, + isIceValuesLoaded: true + }; + } + + default: + return state; + } + } +; + +export default explanation; diff --git a/src/reducers/Jobs.js b/src/reducers/Jobs.js index 0e6650b6..cc8102bc 100644 --- a/src/reducers/Jobs.js +++ b/src/reducers/Jobs.js @@ -15,7 +15,10 @@ import { JOBS_FAILED, JOBS_REQUESTED, JOBS_RETRIEVED, - TRACE_CHANGED + TRACE_CHANGED, + DECODING_REQUESTED, + DECODING_FAILED, + DECODING_RETRIEVED } from '../actions/JobActions'; import {JOB_RUN_CHANGED} from '../actions/RuntimeActions'; import { @@ -78,7 +81,11 @@ const initialState = { attributeNames: [], splitId: -100, filteredJobs: [], - selectedTrace: '' + selectedTrace: '', + jobsById: {}, + decodedDf: {}, + isDecodingLoaded: true + }; const initialFilters = { @@ -318,6 +325,30 @@ const jobs = (state = {...initialState, ...initialFilters}, action) => { }; } + case DECODING_REQUESTED: { + return { + ...state, + isDecodingLoaded: false, + decodedDf: {} + }; + } + + case DECODING_FAILED: { + return { + ...state, + isDecodingLoaded: true, + decodedDf: initialState.decodedDf + }; + } + case DECODING_RETRIEVED: { + const resultList = action.payload; + return { + ...state, + isDecodingLoaded: true, + decodedDf: resultList + }; + } + default: return state; } diff --git a/src/reducers/index.js b/src/reducers/index.js index 483d7c91..7fd44d6f 100644 --- a/src/reducers/index.js +++ b/src/reducers/index.js @@ -6,7 +6,7 @@ import training from './Training'; import splits from './Splits'; import models from './Models'; import traces from './Traces'; -import lime from './Lime'; +import explanation from './Explanation'; import predictions from './Predictions'; @@ -18,6 +18,6 @@ export default combineReducers({ training, splits, traces, - lime, + explanation, predictions }); diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index 670cc282..ae8d9060 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -275,7 +275,7 @@ export const parseLimeResult = (limeValueList) => { if (keys != null) { for (let j = 0; j < keys.length; j++) { if (limeValueList[keys[j]].length == 2) { - labels.push(limeValueList[keys[j]][0]); + labels.push(keys[j] +' = '+ limeValueList[keys[j]][0]); values.push(limeValueList[keys[j]][1]); } } @@ -289,7 +289,9 @@ export const parseICEResult = (iceResult) => { let count = []; for (let j = 0; j < iceResult.length; j++) { labels.push(iceResult[j].label); - values.push(iceResult[j].value - 1).toFixed(2); + if (isNaN(parseFloat(iceResult[j].value))) values.push(iceResult[j].value); + else values.push(iceResult[j].value).toFixed(2); + count.push(iceResult[j].count | 0); } return ({labels: labels, values: values, count: count}); @@ -316,10 +318,11 @@ export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => data.pop(); for (let j = 0; j < prefixs.length; j++) { const prefixValues = traceAttr[prefixs[j]]; - for (let k = 1; k <= Object.keys(prefixValues).length; k++) { - const value = prefixValues['prefix_'+k]; - if (j == 0) data.push({name: 'prefix_'+k, data: []}); - data[k-1]['data'].push(value['importance']); + for (let k = 0; k <= Object.keys(prefixValues).length-1; k++) { + const value = prefixValues[Object.keys(prefixValues)[k]]; + console.log(Object.keys(prefixValues)[k]) + if (j == 0) data.push({name: (Object.keys(prefixValues)[k].concat(' = ', value['value'])), data: []}); + data[k]['data'].push(value['importance']); } } } @@ -395,3 +398,36 @@ const getTraceEventsHeader = (traceList) =>{ } return traceEventsHeaders; }; + + +export const getIceResultListTable = (iceResultList) =>{ + let i=0; + let result = []; + for (i = 0; i{ + let i=0; let j=0; + let result = []; + let keys = Object.keys(dfResult); + if (keys.length>0) { + for (j = 0; j < dfResult[keys[0]].length; j++) { + let arr = []; + arr.push(j+1); + + for (i = 0; i job.id==id)[0]; + } render() { // eslint-disable-next-line max-len - const iceResult = parseICEResult([{'label': 'First outpatient consultation', 'value': 1.25, 'count': 48}, {'label': 'aspiration cytology behalf by p', 'value': 1.6666666666666667, 'count': 3}, {'label': 'assumption laboratory', 'value': 1.6923076923076923, 'count': 130}, {'label': 'compartment for inspection', 'value': 1.6666666666666667, 'count': 12}, {'label': 'ct abdomen', 'value': 2.0, 'count': 2}, {'label': 'cytology - abdominal tumor puncture', 'value': 1.0, 'count': 1}, {'label': 'cytology - ectocervix -', 'value': 1.32, 'count': 25}, {'label': 'cytology - vagina -', 'value': 1.2222222222222223, 'count': 9}, {'label': 'day care - all spec.beh.kind.-rev.', 'value': 1.0, 'count': 2}, {'label': 'demurrage - all spec.beh.kinderg.-Reval.', 'value': 1.7142857142857142, 'count': 28}, {'label': 'e.c.g. - Electrocardiography', 'value': 1.5, 'count': 22}, {'label': 'histological examination - biopsies nno', 'value': 1.3076923076923077, 'count': 13}, {'label': 'immuno-pathology', 'value': 1.25, 'count': 4}, {'label': 'inwend.geneesk. Out-year card costs', 'value': 2.0, 'count': 1}, {'label': 'inwend.geneesk. short-out card cost', 'value': 1.375, 'count': 8}, {'label': 'mammography chest wall', 'value': 1.3333333333333333, 'count': 3}, {'label': 'outpatient follow-up consultation', 'value': 1.087719298245614, 'count': 228}, {'label': 'telephone consultation', 'value': 1.0769230769230769, 'count': 13}, {'label': 'thorax', 'value': 1.375, 'count': 8}, {'label': 'treatment time - Unit t2 - megavolt', 'value': 1.0, 'count': 1}, {'label': 'treatment time - Unit t3 - megavolt', 'value': 1.0, 'count': 1}, {'label': 'ultrasound - internal genitals', 'value': 1.6333333333333333, 'count': 30}] - ); + // const iceResult = parseICEResult([{'label': 'First outpatient consultation', 'value': 1.25, 'count': 48}, {'label': 'aspiration cytology behalf by p', 'value': 1.6666666666666667, 'count': 3}, {'label': 'assumption laboratory', 'value': 1.6923076923076923, 'count': 130}, {'label': 'compartment for inspection', 'value': 1.6666666666666667, 'count': 12}, {'label': 'ct abdomen', 'value': 2.0, 'count': 2}, {'label': 'cytology - abdominal tumor puncture', 'value': 1.0, 'count': 1}, {'label': 'cytology - ectocervix -', 'value': 1.32, 'count': 25}, {'label': 'cytology - vagina -', 'value': 1.2222222222222223, 'count': 9}, {'label': 'day care - all spec.beh.kind.-rev.', 'value': 1.0, 'count': 2}, {'label': 'demurrage - all spec.beh.kinderg.-Reval.', 'value': 1.7142857142857142, 'count': 28}, {'label': 'e.c.g. - Electrocardiography', 'value': 1.5, 'count': 22}, {'label': 'histological examination - biopsies nno', 'value': 1.3076923076923077, 'count': 13}, {'label': 'immuno-pathology', 'value': 1.25, 'count': 4}, {'label': 'inwend.geneesk. Out-year card costs', 'value': 2.0, 'count': 1}, {'label': 'inwend.geneesk. short-out card cost', 'value': 1.375, 'count': 8}, {'label': 'mammography chest wall', 'value': 1.3333333333333333, 'count': 3}, {'label': 'outpatient follow-up consultation', 'value': 1.087719298245614, 'count': 228}, {'label': 'telephone consultation', 'value': 1.0769230769230769, 'count': 13}, {'label': 'thorax', 'value': 1.375, 'count': 8}, {'label': 'treatment time - Unit t2 - megavolt', 'value': 1.0, 'count': 1}, {'label': 'treatment time - Unit t3 - megavolt', 'value': 1.0, 'count': 1}, {'label': 'ultrasound - internal genitals', 'value': 1.6333333333333333, 'count': 30}] + // ); + let decodedDfTableResult = getDecodedDFTable(this.props.decodedDf); return (
    @@ -130,7 +153,30 @@ class Explanation extends Component { {/*
    */} - +
    + +
    +
    + +
    +
    + +
    - -
    -
    - + +
    + +
    +
    + +
    +
    - +
    + jobs = {this.props.jobs} + iceValueList = {parseICEResult(this.props.iceValueList)} + originalList = {this.props.iceValueList} + isIceValuesLoaded = {this.props.isIceValuesLoaded} + selectedAttribute={this.props.selectedAttribute} + attributes ={this.filterJobsById(this.props.jobId) != undefined ? + this.filterJobsById(this.props.jobId).config.encoding.features: []} + onChangeFeature = {this.onChangeFeature.bind(this)} + > - -
    - - - - - - - - -
    -
    - -
    +
    ); } @@ -193,6 +240,7 @@ Explanation.propTypes = { onRequestLogList: PropTypes.func.isRequired, onRequestSplitList: PropTypes.func.isRequired, onRequestJobs: PropTypes.func.isRequired, + onRequestDecoding: PropTypes.func.isRequired, onSplitChange: PropTypes.func.isRequired, onMethodChange: PropTypes.func.isRequired, onTraceChange: PropTypes.func.isRequired, @@ -200,8 +248,17 @@ Explanation.propTypes = { onRequestTraces: PropTypes.func.isRequired, onJobChange: PropTypes.func.isRequired, onRequestLimeValues: PropTypes.func.isRequired, + onRequestSkaterValues: PropTypes.func.isRequired, + onRequestShapValues: PropTypes.func.isRequired, + onRequestIceValues: PropTypes.func.isRequired, onRequestPredictionTemporalList: PropTypes.func.isRequired, onRequestLimeTemporalList: PropTypes.func.isRequired, + onRequestFailLimeValues: PropTypes.func.isRequired, + onRequestFailLimeTemporalList: PropTypes.func.isRequired, + onRequestFailPredictionTemporalList: PropTypes.func.isRequired, + onRequestFailShapValues: PropTypes.func.isRequired, + onRequestFailSkaterValues: PropTypes.func.isRequired, + onRequestFailIceValues: PropTypes.func.isRequired, filterOptionChange: PropTypes.func.isRequired, labelTypeChange: PropTypes.func.isRequired, jobs: PropTypes.arrayOf(jobPropType).isRequired, @@ -222,16 +279,25 @@ Explanation.propTypes = { }).isRequired, clickedJobId: PropTypes.number, limeValueList: PropTypes.any, + shapValueList: PropTypes.any, + iceValueList: PropTypes.any, + skaterValueList: PropTypes.any, traceList: PropTypes.any, logs: PropTypes.any, splits: PropTypes.any, jobsById: PropTypes.any, selectedTrace: PropTypes.any, + selectedAttribute: PropTypes.any, filteredJobs: PropTypes.any, + decodedDf: PropTypes.any, jobId: PropTypes.number.isRequired, isLimeTempStabilityLoaded: PropTypes.bool.isRequired, isPredictionTempStabilityLoaded: PropTypes.bool.isRequired, isLimeValuesLoaded: PropTypes.bool.isRequired, + isShapValuesLoaded: PropTypes.bool.isRequired, + isSkaterValuesLoaded: PropTypes.bool.isRequired, + isIceValuesLoaded: PropTypes.bool.isRequired, + isDecodedValueLoaded: PropTypes.bool.isRequired, limeTempStabilityList: PropTypes.any, predictionTempStabilityList: PropTypes.any }; @@ -241,11 +307,19 @@ const mapStateToProps = (state) => ({ splitLabels: splitsToLabel(state.logs.byId, state.splits.byId, state.jobs.uniqueSplits), fetchState: state.jobs.fetchState, filteredJobs: state.jobs.filteredJobs, + decodedDf: state.jobs.decodedDf, + isDecodedValueLoaded: state.jobs.isDecodingLoaded, logs: state.logs.byId, splits: state.splits.byId, splitId: state.jobs.splitId, - limeValueList: state.lime.limeValueList, - isLimeValuesLoaded: state.lime.isLimeValuesLoaded, + limeValueList: state.explanation.limeValueList, + isLimeValuesLoaded: state.explanation.isLimeValuesLoaded, + shapValueList: state.explanation.shapValueList, + isShapValuesLoaded: state.explanation.isShapValuesLoaded, + iceValueList: state.explanation.iceValueList, + isIceValuesLoaded: state.explanation.isIceValuesLoaded, + skaterValueList: state.explanation.skaterValueList, + isSkaterValuesLoaded: state.explanation.isSkaterValuesLoaded, traceList: state.traces.byId, predictionMethod: state.jobs.predictionMethod, prefixLengths: state.jobs.prefixLengths.sort((a, b) => (a - b)), @@ -253,6 +327,7 @@ const mapStateToProps = (state) => ({ jobsById: state.jobs.byId, jobId: state.jobs.predictionJobId, selectedTrace: state.jobs.selectedTrace, + selectedAttribute: state.explanation.selectedAttribute, limeTempStabilityList: state.predictions.limeTempStabilityList, predictionTempStabilityList: state.predictions.predictionTempStabilityList, isLimeTempStabilityLoaded: state.predictions.isLimeTempStabilityLoaded, @@ -278,11 +353,23 @@ const mapDispatchToProps = (dispatch) => ({ onRequestSplitList: () => dispatch(splitsRequested()), onRequestJobs: () => dispatch(jobsRequested()), onRequestTraces: (id) => dispatch(traceListRequested({id})), + onRequestDecoding: (id) => dispatch(decodingRequested({id})), onRequestLimeValues: (jobId, traceId) => dispatch(limeValueListRequested({jobId, traceId})), + onRequestShapValues: (jobId, traceId) => dispatch(shapValueListRequested({jobId, traceId})), + onRequestIceValues: (jobId, attribute) => dispatch(iceValueListRequested({jobId, attribute})), + onRequestSkaterValues: (jobId) => dispatch(skaterValueListRequested({jobId})), onRequestPredictionTemporalList: (jobId, traceId) => dispatch(temporalPredictionListRequested({jobId, traceId})), onRequestLimeTemporalList: (jobId, traceId) => dispatch(temporalLimePredictionListRequested({jobId, traceId})), + onRequestFailLimeValues: () => dispatch(limeValueListFailed(null)), + onRequestFailShapValues: () => dispatch(shapValueListFailed(null)), + onRequestFailIceValues: () => dispatch(iceValueListFailed(null)), + onRequestFailSkaterValues: () => dispatch(skaterValueListFailed(null)), + onRequestFailPredictionTemporalList: ()=> + dispatch(temporalPredictionListFailed(null)), + onRequestFailLimeTemporalList: () => + dispatch(temporalLimePredictionListFailed(null)), filterOptionChange: (_, event) => dispatch({ type: FILTER_OPTION_CHANGED, payload: {name: event.target.name, value: event.target.value} From 54a0994dcc293bc1b77f193bfb4f1cd2979a8e79 Mon Sep 17 00:00:00 2001 From: Musacca Date: Mon, 23 Mar 2020 17:53:53 +0200 Subject: [PATCH 12/29] Tests SHAP, ICE and Skater developed --- .../components/chart/ScatterChart.test.js | 24 + .../chart/VerticalBarChartCard.test.js | 40 + .../explanation/DecodedDFTable.test.js | 42 + .../components/explanation/ICEResult.test.js | 48 + .../explanation/ICEResultTable.test.js | 24 + .../components/explanation/ShapResult.test.js | 32 + .../explanation/SkaterResult.test.js | 28 + .../explanation/TemporalStability.test.js | 38 + .../components/explanation/post_hoc.test.js | 2 +- src/actions/ServerActions.js | 6 +- src/components/chart/DecisionTree.js | 98 -- src/components/chart/PredictionLineChart.js | 13 +- src/components/chart/R3DecisionTree.js | 72 -- src/components/explanation/DecodedDFTable.js | 10 +- src/components/explanation/FairMLResult.js | 55 - src/components/explanation/ShapResult.js | 1 - src/components/explanation/SkaterResult.js | 1 - .../explanation/TemporalStability.js | 3 +- src/components/explanation/ante_hoc.js | 50 - src/mock_data/Template.js | 7 - src/mock_data/dependence_plot.png | Bin 26054 -> 0 bytes src/mock_data/explainer.html | 32 - src/mock_data/scratch.png | Bin 18776 -> 0 bytes src/mock_data/test.txt | 1128 ----------------- src/mock_data/viz.svg | 1 - src/util/dataReducers.js | 3 +- src/views/Explanation/Explanation.js | 2 +- stories/Explanation.js | 72 ++ 28 files changed, 368 insertions(+), 1464 deletions(-) create mode 100644 src/__tests__/components/chart/ScatterChart.test.js create mode 100644 src/__tests__/components/chart/VerticalBarChartCard.test.js create mode 100644 src/__tests__/components/explanation/DecodedDFTable.test.js create mode 100644 src/__tests__/components/explanation/ICEResult.test.js create mode 100644 src/__tests__/components/explanation/ICEResultTable.test.js create mode 100644 src/__tests__/components/explanation/ShapResult.test.js create mode 100644 src/__tests__/components/explanation/SkaterResult.test.js create mode 100644 src/__tests__/components/explanation/TemporalStability.test.js delete mode 100644 src/components/chart/DecisionTree.js delete mode 100644 src/components/chart/R3DecisionTree.js delete mode 100644 src/components/explanation/FairMLResult.js delete mode 100644 src/components/explanation/ante_hoc.js delete mode 100644 src/mock_data/Template.js delete mode 100644 src/mock_data/dependence_plot.png delete mode 100644 src/mock_data/explainer.html delete mode 100644 src/mock_data/scratch.png delete mode 100644 src/mock_data/test.txt delete mode 100644 src/mock_data/viz.svg diff --git a/src/__tests__/components/chart/ScatterChart.test.js b/src/__tests__/components/chart/ScatterChart.test.js new file mode 100644 index 00000000..190279d4 --- /dev/null +++ b/src/__tests__/components/chart/ScatterChart.test.js @@ -0,0 +1,24 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ScatterChartCard from '../../../components/chart/ScatterChartCard'; +import {parseTemporalStabilityPredictionResultList} +from '../../../util/dataReducers'; +import {temporalStabilityResult} from '../../../../stories/Explanation'; +import ReactApexChart from 'react-apexcharts'; + +const temporalStabilityPredictionResult = +parseTemporalStabilityPredictionResultList(temporalStabilityResult, '2_3301'); + +it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(ReactApexChart).length).toBe(1); + const chartProps = element.find(ReactApexChart).props(); + expect(chartProps.series[0].data.length).toBe(temporalStabilityPredictionResult.length); +}); + +it('no data', () => { + const element = shallow(); + expect(element.find(ReactApexChart).length).toBe(0); +}); + diff --git a/src/__tests__/components/chart/VerticalBarChartCard.test.js b/src/__tests__/components/chart/VerticalBarChartCard.test.js new file mode 100644 index 00000000..d7043a80 --- /dev/null +++ b/src/__tests__/components/chart/VerticalBarChartCard.test.js @@ -0,0 +1,40 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ReactApexChart from 'react-apexcharts'; +import VerticalBarChartCard from '../../../components/chart/VerticalBarChartCard'; + +const labels = ['event', 'event1', 'event2', 'event3', 'event4']; +const data = [1, 0.8, 0.1, 0.3, 0]; +const count = [1, 2, 1, 3, 9]; + + +describe('VerticalBarChartCard', () => { + it('renders with empty data', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(ReactApexChart).length).toBe(0); + }); + + it('renders with empty labels', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(ReactApexChart).length).toBe(1); + + const chartProps = element.find(ReactApexChart).props(); + expect(chartProps.options.xaxis.categories.length).toBe(0); + expect(chartProps.series[0].data.length).toBe(count.length); + expect(chartProps.series[1].data.length).toBe(data.length); + expect(chartProps.options.xaxis.categories.length).toBe(0); + }); + + it('renders with non empty data and label', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(ReactApexChart).length).toBe(1); + + const chartProps = element.find(ReactApexChart).props(); + expect(chartProps.options.xaxis.categories.length).toBe(labels.length); + expect(chartProps.series[0].data.length).toBe(count.length); + expect(chartProps.series[1].data.length).toBe(data.length); + }); +}); diff --git a/src/__tests__/components/explanation/DecodedDFTable.test.js b/src/__tests__/components/explanation/DecodedDFTable.test.js new file mode 100644 index 00000000..d7d55baa --- /dev/null +++ b/src/__tests__/components/explanation/DecodedDFTable.test.js @@ -0,0 +1,42 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import DecodedDFTable from '../../../components/explanation/DecodedDFTable'; +import {getDecodedDFTable} from '../../../util/dataReducers'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import {decodedDFResultList} from '../../../../stories/Explanation'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; + + +const decodedDFResult = getDecodedDFTable(decodedDFResultList); + +describe('Dedocded DF Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(1); + expect(element.find(CircularProgress).length).toBe(0); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(decodedDFResult.data.length+1); + expect(element.find(DataTable).at(0).find(TableHeader).find(TableRow).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(decodedDFResult.data.length); + expect(element.find(DataTable).at(0).find(TableHeader) + .find(TableColumn).length).toBe(decodedDFResult.headers.length); + expect(element.find(TablePagination).length).toBe(1); + }); + + it('no element', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(0); + expect(element.find(TablePagination).length).toBe(0); + expect(element.find(TableRow).length).toBe(0); + expect(element.find(CircularProgress).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/explanation/ICEResult.test.js b/src/__tests__/components/explanation/ICEResult.test.js new file mode 100644 index 00000000..ca998aa6 --- /dev/null +++ b/src/__tests__/components/explanation/ICEResult.test.js @@ -0,0 +1,48 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ICEResult from '../../../components/explanation/ICEResult'; +import IceResultTable from '../../../components/explanation/IceResultTable'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; +import VerticalBarChartCard from '../../../components/chart/VerticalBarChartCard'; +import {parseICEResult} from '../../../util/dataReducers'; +import {iceResultList} from '../../../../stories/Explanation'; +import SelectField from 'react-md/lib/SelectFields'; + +const iceResult = parseICEResult(iceResultList); + +describe('ICE result', () => { + it('All data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(SelectField).length).toBe(1); + expect(element.find(SelectField).at(0).props().menuItems.length).toBe(2); + + expect(element.find(VerticalBarChartCard).length).toBe(1); + expect(element.find(IceResultTable).length).toBe(0); + + expect(element.find(CircularProgress).length).toBe(0); + }); + + it('None of the data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(SelectField).length).toBe(1); + expect(element.find(SelectField).at(0).props().menuItems.length).toBe(2); + expect(element.find(VerticalBarChartCard).length).toBe(1); + expect(element.find(IceResultTable).length).toBe(0); + expect(element.find(CircularProgress).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/explanation/ICEResultTable.test.js b/src/__tests__/components/explanation/ICEResultTable.test.js new file mode 100644 index 00000000..1d217413 --- /dev/null +++ b/src/__tests__/components/explanation/ICEResultTable.test.js @@ -0,0 +1,24 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import IceResultTable from '../../../components/explanation/IceResultTable'; +import {getIceResultListTable} from '../../../util/dataReducers'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import {iceResultList} from '../../../../stories/Explanation'; + + +const iceResult = getIceResultListTable(iceResultList); + +describe('Ice result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(iceResult.length+1); + expect(element.find(DataTable).at(0).find(TableHeader).find(TableRow).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(iceResult.length); + expect(element.find(DataTable).at(0).find(TableHeader) + .find(TableColumn).length).toBe(3); + expect(element.find(TablePagination).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/explanation/ShapResult.test.js b/src/__tests__/components/explanation/ShapResult.test.js new file mode 100644 index 00000000..c7554426 --- /dev/null +++ b/src/__tests__/components/explanation/ShapResult.test.js @@ -0,0 +1,32 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ShapResult from '../../../components/explanation/ShapResult'; +import {shapResult} from '../../../../stories/Explanation'; +import InlineSVG from 'svg-inline-react'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; + +describe('Shap result', () => { + it('renders with data', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(InlineSVG).length).toBe(1); + expect(element.find(CircularProgress).length).toBe(0); + }); + + it('renders without data', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(InlineSVG).length).toBe(0); + expect(element.find(CircularProgress).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/explanation/SkaterResult.test.js b/src/__tests__/components/explanation/SkaterResult.test.js new file mode 100644 index 00000000..37de0065 --- /dev/null +++ b/src/__tests__/components/explanation/SkaterResult.test.js @@ -0,0 +1,28 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import SkaterResult from '../../../components/explanation/SkaterResult'; +import {skaterResult} from '../../../../stories/Explanation'; +import InlineSVG from 'svg-inline-react'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; + +describe('Skater result', () => { + it('renders with data', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(InlineSVG).length).toBe(1); + expect(element.find(CircularProgress).length).toBe(0); + }); + + it('renders without data', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(InlineSVG).length).toBe(0); + expect(element.find(CircularProgress).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/explanation/TemporalStability.test.js b/src/__tests__/components/explanation/TemporalStability.test.js new file mode 100644 index 00000000..ca653e2d --- /dev/null +++ b/src/__tests__/components/explanation/TemporalStability.test.js @@ -0,0 +1,38 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import TemporalStability from '../../../components/explanation/TemporalStability'; +import {limeTemporalStabilityResult, temporalStabilityResult} from '../../../../stories/Explanation'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; +import PredictionLineChart from '../../../components/chart/PredictionLineChart'; +import ScatterChartCard from '../../../components/chart/ScatterChartCard'; + + +describe('Temporal stability', () => { + it('All data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(PredictionLineChart).length).toBe(1); + expect(element.find(ScatterChartCard).length).toBe(1); + expect(element.find(CircularProgress).length).toBe(0); + }); + + it('None of the data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(PredictionLineChart).length).toBe(1); + expect(element.find(ScatterChartCard).length).toBe(1); + expect(element.find(CircularProgress).length).toBe(2); + }); +}); diff --git a/src/__tests__/components/explanation/post_hoc.test.js b/src/__tests__/components/explanation/post_hoc.test.js index 137c0494..0f112aaa 100644 --- a/src/__tests__/components/explanation/post_hoc.test.js +++ b/src/__tests__/components/explanation/post_hoc.test.js @@ -5,7 +5,7 @@ import HorizontalBarChartCard from '../../../components/chart/HorizontalBarChart import {parseLimeResult} from '../../../util/dataReducers'; import {limeList} from '../../../../stories/Explanation'; -describe('TraceTable', () => { +describe('Lime result', () => { it('renders without data', () => { const element = shallow( (dispatch) => { jsonAjax( diff --git a/src/components/chart/DecisionTree.js b/src/components/chart/DecisionTree.js deleted file mode 100644 index 9b66def1..00000000 --- a/src/components/chart/DecisionTree.js +++ /dev/null @@ -1,98 +0,0 @@ -/* eslint-disable max-len */ -import React from 'react'; -import {Graphviz} from 'graphviz-react'; -class DecisionTree extends React.Component { - constructor(props) { - super(props); - } - render() { - return prefix_1 ≤ 23.5
    gini = 0.5
    samples = 100.0%
    value = [0.5, 0.5]
    class = prefix_2>]; - 1 [fillcolor=cornsilk, label=prefix_2 ≤ 30.5
    gini = 0.38
    samples = 64.8%
    value = [0.255, 0.745]
    class = prefix_2>]; - 0 -> 1 [color=steelblue, headlabel="True", labelangle=45, labeldistance="2.5"]; - 2 [fillcolor=cornsilk, label=prefix_2 ≤ 3.5
    gini = 0.123
    samples = 53.9%
    value = [0.066, 0.934]
    class = prefix_2>]; - 1 -> 2 [color=steelblue]; - 3 [fillcolor=coral, label=gini = 0.0
    samples = 0.4%
    value = [1.0, 0.0]
    class = prefix_1>]; - 2 -> 3 [color=steelblue]; - 4 [fillcolor=cornsilk, label=prefix_1 ≤ 12.5
    gini = 0.099
    samples = 53.5%
    value = [0.052, 0.948]
    class = prefix_2>]; - 2 -> 4 [color=steelblue]; - 5 [fillcolor=lightsteelblue, label=gini = 0.0
    samples = 28.5%
    value = [0.0, 1.0]
    class = prefix_2>]; - 4 -> 5 [color=steelblue]; - 6 [fillcolor=cornsilk, label=prefix_2 ≤ 9.0
    gini = 0.193
    samples = 25.0%
    value = [0.108, 0.892]
    class = prefix_2>]; - 4 -> 6 [color=steelblue]; - 7 [fillcolor=lightsteelblue, label=gini = -0.0
    samples = 20.2%
    value = [0.0, 1.0]
    class = prefix_2>]; - 6 -> 7 [color=steelblue]; - 8 [fillcolor=cornsilk, label=prefix_1 ≤ 20.0
    gini = 0.498
    samples = 4.7%
    value = [0.472, 0.528]
    class = prefix_2>]; - 6 -> 8 [color=steelblue]; - 9 [fillcolor=coral, label=gini = 0.305
    samples = 2.2%
    value = [0.812, 0.188]
    class = prefix_1>]; - 8 -> 9 [color=steelblue]; - 12 [fillcolor=lightsteelblue, label=gini = 0.0
    samples = 2.5%
    value = [0.0, 1.0]
    class = prefix_2>]; - 8 -> 12 [color=steelblue]; - 13 [fillcolor=cornsilk, label=prefix_1 ≤ 11.5
    gini = 0.261
    samples = 10.9%
    value = [0.846, 0.154]
    class = prefix_1>]; - 1 -> 13 [color=steelblue]; - 14 [fillcolor=cornsilk, label=prefix_2 ≤ 35.5
    gini = 0.498
    samples = 3.1%
    value = [0.467, 0.533]
    class = prefix_2>]; - 13 -> 14 [color=steelblue]; - 15 [fillcolor=coral, label=gini = 0.0
    samples = 0.4%
    value = [1.0, 0.0]
    class = prefix_1>]; - 14 -> 15 [color=steelblue]; - 16 [fillcolor=cornsilk, label=prefix_1 ≤ 5.5
    gini = 0.44
    samples = 2.6%
    value = [0.327, 0.673]
    class = prefix_2>]; - 14 -> 16 [color=steelblue]; - 17 [fillcolor=coral, label=gini = 0.411
    samples = 0.8%
    value = [0.711, 0.289]
    class = prefix_1>]; - 16 -> 17 [color=steelblue]; - 20 [fillcolor=cornsilk, label=prefix_2 ≤ 44.5
    gini = 0.186
    samples = 1.9%
    value = [0.104, 0.896]
    class = prefix_2>]; - 16 -> 20 [color=steelblue]; - 21 [fillcolor=lightsteelblue, label=gini = 0.0
    samples = 1.8%
    value = [0.0, 1.0]
    class = prefix_2>]; - 20 -> 21 [color=steelblue]; - 22 [fillcolor=coral, label=gini = 0.0
    samples = 0.1%
    value = [1.0, 0.0]
    class = prefix_1>]; - 20 -> 22 [color=steelblue]; - 23 [fillcolor=cornsilk, label=prefix_1 ≤ 19.5
    gini = 0.091
    samples = 7.8%
    value = [0.952, 0.048]
    class = prefix_1>]; - 13 -> 23 [color=steelblue]; - 24 [fillcolor=coral, label=gini = 0.0
    samples = 7.2%
    value = [1.0, 0.0]
    class = prefix_1>]; - 23 -> 24 [color=steelblue]; - 25 [fillcolor=lightsteelblue, label=gini = 0.0
    samples = 0.7%
    value = [0.0, 1.0]
    class = prefix_2>]; - 23 -> 25 [color=steelblue]; - 26 [fillcolor=cornsilk, label=prefix_2 ≤ 7.0
    gini = 0.297
    samples = 35.2%
    value = [0.819, 0.181]
    class = prefix_1>]; - 0 -> 26 [color=steelblue, headlabel="False", labelangle="-45", labeldistance="2.5"]; - 27 [fillcolor=cornsilk, label=prefix_2 ≤ 3.5
    gini = 0.124
    samples = 3.0%
    value = [0.066, 0.934]
    class = prefix_2>]; - 26 -> 27 [color=steelblue]; - 28 [fillcolor=coral, label=gini = 0.0
    samples = 0.1%
    value = [1.0, 0.0]
    class = prefix_1>]; - 27 -> 28 [color=steelblue]; - 29 [fillcolor=lightsteelblue, label=gini = 0.0
    samples = 2.9%
    value = [0.0, 1.0]
    class = prefix_2>]; - 27 -> 29 [color=steelblue]; - 30 [fillcolor=cornsilk, label=prefix_2 ≤ 42.5
    gini = 0.238
    samples = 32.2%
    value = [0.862, 0.138]
    class = prefix_1>]; - 26 -> 30 [color=steelblue]; - 31 [fillcolor=cornsilk, label=prefix_1 ≤ 24.5
    gini = 0.179
    samples = 29.8%
    value = [0.9, 0.1]
    class = prefix_1>]; - 30 -> 31 [color=steelblue]; - 32 [fillcolor=coral, label=gini = 0.0
    samples = 13.2%
    value = [1.0, 0.0]
    class = prefix_1>]; - 31 -> 32 [color=steelblue]; - 33 [fillcolor=cornsilk, label=prefix_2 ≤ 23.5
    gini = 0.31
    samples = 16.6%
    value = [0.808, 0.192]
    class = prefix_1>]; - 31 -> 33 [color=steelblue]; - 34 [fillcolor=cornsilk, label=prefix_2 ≤ 11.5
    gini = 0.07
    samples = 11.9%
    value = [0.964, 0.036]
    class = prefix_1>]; - 33 -> 34 [color=steelblue]; - 35 [fillcolor=coral, label=gini = 0.0
    samples = 9.5%
    value = [1.0, 0.0]
    class = prefix_1>]; - 34 -> 35 [color=steelblue]; - 36 [fillcolor=cornsilk, label=prefix_2 ≤ 15.5
    gini = 0.322
    samples = 2.4%
    value = [0.799, 0.201]
    class = prefix_1>]; - 34 -> 36 [color=steelblue]; - 37 [fillcolor=lightsteelblue, label=gini = 0.0
    samples = 0.8%
    value = [0.0, 1.0]
    class = prefix_2>]; - 36 -> 37 [color=steelblue]; - 38 [fillcolor=coral, label=gini = -0.0
    samples = 1.7%
    value = [1.0, 0.0]
    class = prefix_1>]; - 36 -> 38 [color=steelblue]; - 39 [fillcolor=cornsilk, label=prefix_2 ≤ 38.5
    gini = 0.268
    samples = 4.7%
    value = [0.159, 0.841]
    class = prefix_2>]; - 33 -> 39 [color=steelblue]; - 40 [fillcolor=lightsteelblue, label=gini = 0.0
    samples = 4.3%
    value = [0.0, 1.0]
    class = prefix_2>]; - 39 -> 40 [color=steelblue]; - 41 [fillcolor=coral, label=gini = 0.0
    samples = 0.4%
    value = [1.0, 0.0]
    class = prefix_1>]; - 39 -> 41 [color=steelblue]; - 42 [fillcolor=cornsilk, label=prefix_2 ≤ 45.0
    gini = 0.149
    samples = 2.4%
    value = [0.081, 0.919]
    class = prefix_2>]; - 30 -> 42 [color=steelblue]; - 43 [fillcolor=lightsteelblue, label=gini = 0.0
    samples = 2.3%
    value = [0.0, 1.0]
    class = prefix_2>]; - 42 -> 43 [color=steelblue]; - 44 [fillcolor=coral, label=gini = -0.0
    samples = 0.1%
    value = [1.0, 0.0]
    class = prefix_1>]; - 42 -> 44 [color=steelblue]; - }`} /> - ; - } -} - -export default DecisionTree; diff --git a/src/components/chart/PredictionLineChart.js b/src/components/chart/PredictionLineChart.js index 5e1f7768..e1c3cdd5 100644 --- a/src/components/chart/PredictionLineChart.js +++ b/src/components/chart/PredictionLineChart.js @@ -36,16 +36,13 @@ class PredictionLineChart extends React.Component { max: this.props.data.length +1, tickAmount: this.props.data.length +1, title: { - text: 'Time' + text: 'Feature' } }, yaxis: { title: { - text: 'Prediction' + text: 'Importance' }, - min: -1, - max: 2, - tickAmount: 3, axisBorder: { show: true, color: '#000000', @@ -59,13 +56,13 @@ class PredictionLineChart extends React.Component { } }, legend: { - position: 'top', + position: 'bottom', horizontalAlign: 'right', - floating: true, + floating: false, } }, }; - const height = '350em'; + const height = '450em'; const chart = ( - -
    - ); -} -} -export default R3DecisionTree; - diff --git a/src/components/explanation/DecodedDFTable.js b/src/components/explanation/DecodedDFTable.js index cfd8bd7d..135a726a 100644 --- a/src/components/explanation/DecodedDFTable.js +++ b/src/components/explanation/DecodedDFTable.js @@ -4,7 +4,7 @@ import PropTypes from 'prop-types'; import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; import CircularProgress from 'react-md/lib/Progress/CircularProgress'; -class IceResultTable extends PureComponent { +class DecodedDFTable extends PureComponent { constructor(props) { super(props); this.state = { @@ -49,6 +49,7 @@ class IceResultTable extends PureComponent {     {!this.props.isDecodedValueLoaded ? : null} + {this.props.values.length>0 ? @@ -72,7 +73,8 @@ class IceResultTable extends PureComponent { rows={this.props.values.length} rowsPerPageLabel={'Rows per page'} onPagination={this.handlePagination.bind(this)}/> - + : null + }     ); @@ -84,11 +86,11 @@ class IceResultTable extends PureComponent { } } -IceResultTable.propTypes = { +DecodedDFTable.propTypes = { values: PropTypes.array.isRequired, headers: PropTypes.array.isRequired, isDecodedValueLoaded: PropTypes.bool.isRequired, jobId: PropTypes.any.isRequired, }; -export default IceResultTable; +export default DecodedDFTable; diff --git a/src/components/explanation/FairMLResult.js b/src/components/explanation/FairMLResult.js deleted file mode 100644 index ac4c2dba..00000000 --- a/src/components/explanation/FairMLResult.js +++ /dev/null @@ -1,55 +0,0 @@ -import React, {PureComponent} from 'react'; -import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; -import PropTypes from 'prop-types'; -import SelectField from 'react-md/lib/SelectFields'; -import HorizontalBarChartCard from '../../components/chart/HorizontalBarChartCard'; -import {parseFairMLResult} from '../../util/dataReducers'; - -class ShapResult extends PureComponent { - constructor(props) { - super(props); - this.state = { - }; - } - getTraceSelector() { - return ( - - ); - } - - render() { - const fairMLResult = parseFairMLResult([{'label': 'Age_1', 'value': 0.5}, - {'label': 'CType_1', 'value': 0.5}, - {'label': 'ClType_1', 'value': 0.5}, - {'label': 'ClaimValue_1', 'value': 0.5}, - {'label': 'PClaims_1', 'value': 0.5}, - {'label': 'lifecycle:transition_1', 'value': 0.5}, - {'label': 'org:resource_1', 'value': 0.5}]); - const horizontalBarChart = ; - return ( -
    -

    FairML result

    -
    -

    Select the prefix

    - {this.getTraceSelector()} -
    -
    {horizontalBarChart}
    - -
    - ); - } -} -ShapResult.propTypes = { - iceResult: PropTypes.any, - jobId: PropTypes.any, -}; -export default ShapResult; diff --git a/src/components/explanation/ShapResult.js b/src/components/explanation/ShapResult.js index 12c8ad0f..7ae3bb7f 100644 --- a/src/components/explanation/ShapResult.js +++ b/src/components/explanation/ShapResult.js @@ -1,7 +1,6 @@ import React, {PureComponent} from 'react'; import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; import PropTypes from 'prop-types'; -import SelectField from 'react-md/lib/SelectFields'; import InlineSVG from 'svg-inline-react'; import CircularProgress from 'react-md/lib/Progress/CircularProgress'; diff --git a/src/components/explanation/SkaterResult.js b/src/components/explanation/SkaterResult.js index 4bf28559..a5294183 100644 --- a/src/components/explanation/SkaterResult.js +++ b/src/components/explanation/SkaterResult.js @@ -1,7 +1,6 @@ import React, {PureComponent} from 'react'; import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; import PropTypes from 'prop-types'; -import viz from '../../mock_data/viz.svg'; import InlineSVG from 'svg-inline-react'; import CircularProgress from 'react-md/lib/Progress/CircularProgress'; diff --git a/src/components/explanation/TemporalStability.js b/src/components/explanation/TemporalStability.js index c543446b..2302fcaf 100644 --- a/src/components/explanation/TemporalStability.js +++ b/src/components/explanation/TemporalStability.js @@ -13,8 +13,7 @@ const TemporalStability = (props) => { parseTemporalStabilityLimeResultList(props.limeTemporalChartData, props.traceId); const temporalStabilityPredictionResult = parseTemporalStabilityPredictionResultList(props.predictionTemportalChartData, props.traceId); - - return
    + return
    diff --git a/src/components/explanation/ante_hoc.js b/src/components/explanation/ante_hoc.js deleted file mode 100644 index 4848889d..00000000 --- a/src/components/explanation/ante_hoc.js +++ /dev/null @@ -1,50 +0,0 @@ -/** - * Created by Williams.Rizzi on 9/9/19. - */ -import React from 'react'; -import {Card, CardText, CardTitle} from 'react-md/lib/Cards/index'; -import PropTypes from 'prop-types'; -import FetchState from './../FetchState'; -import {fetchStatePropType, jobPropType, selectLabelProptype} from '../../propTypes'; - -const AnteHocExplanation = (props) => { - // const selectChange = (value, _) => { - // props.splitChange(value); - // }; - - return - - -

    asdf

    - -     -     ; -}; - - -AnteHocExplanation.propTypes = { - jobs: PropTypes.arrayOf(jobPropType).isRequired, - splitLabels: selectLabelProptype, - fetchState: fetchStatePropType, - methodChange: PropTypes.func.isRequired, - splitChange: PropTypes.func.isRequired, - prefixLengths: PropTypes.arrayOf(PropTypes.string).isRequired, - prefixChange: PropTypes.func.isRequired, - selectedPrefixes: PropTypes.arrayOf(PropTypes.number).isRequired, - selectedSplitId: PropTypes.number.isRequired, - filterOptionChange: PropTypes.func.isRequired, - labelChange: PropTypes.func.isRequired, - filterOptions: PropTypes.shape({ - encodings: PropTypes.arrayOf(PropTypes.string).isRequired, - clusterings: PropTypes.arrayOf(PropTypes.string).isRequired, - classification: PropTypes.arrayOf(PropTypes.string).isRequired, - regression: PropTypes.arrayOf(PropTypes.string).isRequired, - timeSeriesPrediction: PropTypes.arrayOf(PropTypes.string).isRequired, - labelling: PropTypes.any.isRequired, - attributeNames: PropTypes.arrayOf(PropTypes.string).isRequired, - thresholds: PropTypes.arrayOf(PropTypes.number).isRequired, - padding: PropTypes.string.isRequired - }).isRequired, - predictionMethod: PropTypes.string.isRequired -}; -export default AnteHocExplanation; diff --git a/src/mock_data/Template.js b/src/mock_data/Template.js deleted file mode 100644 index 025a5960..00000000 --- a/src/mock_data/Template.js +++ /dev/null @@ -1,7 +0,0 @@ -import React from 'react'; -let Template = React.createReactClass({ - render: function () { - return (
    Mi HTML
    ); - } -}); -module.exports = Template; diff --git a/src/mock_data/dependence_plot.png b/src/mock_data/dependence_plot.png deleted file mode 100644 index 83c4717d1f0fdfcf994b829208c346d82b38e6bd..0000000000000000000000000000000000000000 GIT binary patch literal 0 HcmV?d00001 literal 26054 zcmeFZcRbd8-#>n6X^57FSrMXAO37@?$lf!vkX1&J(KH&ek}Z)<%9c@9lw`{;NwyNQ zf6q7Pd0qE)-Pe6T9^c>i@7MV_ABw|qd_M2-dOg?s;~^&_zIHXkY6^w2R^sd_1qx-! z5QReZd*upzM?Whz9$%JSIU%965`V6*G<3(mS6Q7^ze1tV>5>1bV#Q)i@J#`m(`q(~ zmc};rdY6qT=6W_(mn>~Andon~GrD}m#M0v6z61OC_H4gsV`C-A%lprt@3Xvofp^!v zr;-%Pc8bKQ<4RXU2HG68{EX)2e@<-Y?2hQtXWh0F#Rl*bxA$;kiI@?NxuXM-0(&Eci%K!hX|1S*_*9A9PW(6&+5RFWW zy_S}i=@+XbmAW?X)riU+&eu#gt@kN6tO?>bV;UE7p2-@@9Tr`_e0iL4We~#w{o5~J zzVsYxd7*bpBi(eDi;K%0H#eRgJH8a;?919r=Iz+g>AC6Qbdy?+J9qB%KGw9@J(kt| zKA`_Y;K9Dy7+DXeeY*LH?Rk#{Og$j7;-O zqkAk@JE=r|y<^)o$48mCz(-SLWxEbbq0u)oa_6;cvl*g-mzwquetsoBJwC`YCUCDL z^2`H<-3JcH&rVNd_K&tZ4x5a0zG*ISDX_?&G?u8zFmI{LwYMB>PL~>N$qZm08*0-$ 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\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n\nnode1\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode1->node2\n\n\n\n\n\nnode1->leaf5\n\n\n\n\n\nleaf6\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n\nnode0\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\nnode0->node1\n\n\n<\n\n\n\nnode0->leaf6\n\n\n≥\n\n\n\n\nlegend\n\n\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n \ No newline at end of file diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index ae8d9060..9b78541a 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -312,6 +312,7 @@ export const parseFairMLResult = (iceResult) => { export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => { let data = [[]]; let prefixs = []; + if (predictionList[traceId] != null || predictionList[traceId] != undefined) { const traceAttr = predictionList[traceId]; prefixs = Object.keys(traceAttr); @@ -320,7 +321,6 @@ export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => const prefixValues = traceAttr[prefixs[j]]; for (let k = 0; k <= Object.keys(prefixValues).length-1; k++) { const value = prefixValues[Object.keys(prefixValues)[k]]; - console.log(Object.keys(prefixValues)[k]) if (j == 0) data.push({name: (Object.keys(prefixValues)[k].concat(' = ', value['value'])), data: []}); data[k]['data'].push(value['importance']); } @@ -410,6 +410,7 @@ export const getIceResultListTable = (iceResultList) =>{ arr.push(iceResultList[i]['count']); result.push(arr); } + return result; }; diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index b65a9ff6..1b4c8c36 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -32,7 +32,7 @@ import TraceExplanation from '../../components/explanation/TraceExplanation'; import {getTraceIdsFromLogs, parseLimeResult, parseICEResult, getDecodedDFTable} from '../../util/dataReducers'; import JobModelsTable from '../../components/explanation/JobModelsTable'; import TemporalStability from '../../components/explanation/TemporalStability'; -import {temporalPredictionListRequested, temporalLimePredictionListRequested, +import {temporalPredictionListRequested, temporalLimePredictionListRequested, temporalLimePredictionListFailed, temporalPredictionListFailed} from '../../actions/PredictionAction'; import ShapResult from '../../components/explanation/ShapResult'; import ICEResult from '../../components/explanation/ICEResult'; diff --git a/stories/Explanation.js b/stories/Explanation.js index 3b60fb9b..34533e33 100644 --- a/stories/Explanation.js +++ b/stories/Explanation.js @@ -75,3 +75,75 @@ export const traceList = [{ } ] }]; + +export const decodedDFResultList = { + 'prefix_1': [ + 'Register', + 'Register', + 'Register'], + 'prefix_2': [ + 'Register', + 'Register', + 'Register'], + 'org:resource_1': [ + 'PR3', + 'PR3', + 'PR3'] +}; + +export const iceResultList = [ + 'False', + [ + { + 'value': '12.0', + 'label': 1.0000, + 'count': 1 + }, + { + 'value': '16.0', + 'label': 1.0000, + 'count': 1 + }, + { + 'value': '18.0', + 'label': 2.0000, + 'count': 1 + }, + ] +]; + +export const shapResult = [ + 'False', + '' +]; + +export const skaterResult = [ + 'False', + '' +]; + +export const limeTemporalStabilityResult = { + '2_3301': { + 'prefix_1': { + 'prefix_2': { + 'value': 'High Insurance Check', + 'importance': -35642.4310 + }, + 'prefix_1': { + 'value': 'Register', + 'importance': 0.0000 + } + } + } +}; + +export const temporalStabilityResult = { + '2_3301': { + 'prefix_1': { + 'value': 'Register', + 'predicted': 0 + } + } +}; + + From f2645cddc349d525d7ae30a7abea61e6a930d54f Mon Sep 17 00:00:00 2001 From: Musacca Date: Sat, 4 Apr 2020 12:11:46 +0300 Subject: [PATCH 13/29] small design bug fix --- src/views/Explanation/Explanation.js | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 1b4c8c36..523fe04f 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -14,7 +14,8 @@ import { jobsRequested, TRACE_CHANGED, PREDICTION_JOB_CHANGED, - decodingRequested + decodingRequested, + decodingFailed } from '../../actions/JobActions'; import {fetchStatePropType, jobPropType, selectLabelProptype} from '../../propTypes'; import {mapJobs, splitsToLabel} from '../../util/unNormalize'; @@ -66,6 +67,7 @@ class Explanation extends Component { this.props.onRequestFailShapValues(null, null); this.props.onRequestFailSkaterValues(null); this.props.onRequestFailIceValues(null, null); + this.props.onRequestFailDecodeDF(null); } onChangeTrace(trace) { @@ -94,7 +96,7 @@ class Explanation extends Component { } this.props.onRequestSkaterValues(id); this.props.onRequestDecoding(id); - this.props.onRequestFailIceValues(); + this.props.onRequestIceValues(this.props.jobId, this.props.selectedAttribute); } componentDidMount() { @@ -259,6 +261,7 @@ Explanation.propTypes = { onRequestFailShapValues: PropTypes.func.isRequired, onRequestFailSkaterValues: PropTypes.func.isRequired, onRequestFailIceValues: PropTypes.func.isRequired, + onRequestFailDecodeDF: PropTypes.func.isRequired, filterOptionChange: PropTypes.func.isRequired, labelTypeChange: PropTypes.func.isRequired, jobs: PropTypes.arrayOf(jobPropType).isRequired, @@ -370,6 +373,8 @@ const mapDispatchToProps = (dispatch) => ({ dispatch(temporalPredictionListFailed(null)), onRequestFailLimeTemporalList: () => dispatch(temporalLimePredictionListFailed(null)), + onRequestFailDecodeDF: () => + dispatch(decodingFailed(null)), filterOptionChange: (_, event) => dispatch({ type: FILTER_OPTION_CHANGED, payload: {name: event.target.name, value: event.target.value} From addbb4b92b65efecca235fb4de4d4512604809c2 Mon Sep 17 00:00:00 2001 From: Musacca Date: Sat, 4 Apr 2020 12:15:45 +0300 Subject: [PATCH 14/29] Update Explanation.js --- src/views/Explanation/Explanation.js | 12 +++++++----- 1 file changed, 7 insertions(+), 5 deletions(-) diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 1b4c8c36..06b28bcb 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -1,6 +1,3 @@ -/** - * Created by Williams.Rizzi on 9/9/19. - */ import React, {Component} from 'react'; import {connect} from 'react-redux'; import PropTypes from 'prop-types'; @@ -14,7 +11,8 @@ import { jobsRequested, TRACE_CHANGED, PREDICTION_JOB_CHANGED, - decodingRequested + decodingRequested, + decodingFailed } from '../../actions/JobActions'; import {fetchStatePropType, jobPropType, selectLabelProptype} from '../../propTypes'; import {mapJobs, splitsToLabel} from '../../util/unNormalize'; @@ -66,6 +64,7 @@ class Explanation extends Component { this.props.onRequestFailShapValues(null, null); this.props.onRequestFailSkaterValues(null); this.props.onRequestFailIceValues(null, null); + this.props.onRequestFailDecodeDF(null); } onChangeTrace(trace) { @@ -94,7 +93,7 @@ class Explanation extends Component { } this.props.onRequestSkaterValues(id); this.props.onRequestDecoding(id); - this.props.onRequestFailIceValues(); + this.props.onRequestIceValues(this.props.jobId, this.props.selectedAttribute); } componentDidMount() { @@ -259,6 +258,7 @@ Explanation.propTypes = { onRequestFailShapValues: PropTypes.func.isRequired, onRequestFailSkaterValues: PropTypes.func.isRequired, onRequestFailIceValues: PropTypes.func.isRequired, + onRequestFailDecodeDF: PropTypes.func.isRequired, filterOptionChange: PropTypes.func.isRequired, labelTypeChange: PropTypes.func.isRequired, jobs: PropTypes.arrayOf(jobPropType).isRequired, @@ -370,6 +370,8 @@ const mapDispatchToProps = (dispatch) => ({ dispatch(temporalPredictionListFailed(null)), onRequestFailLimeTemporalList: () => dispatch(temporalLimePredictionListFailed(null)), + onRequestFailDecodeDF: () => + dispatch(decodingFailed(null)), filterOptionChange: (_, event) => dispatch({ type: FILTER_OPTION_CHANGED, payload: {name: event.target.name, value: event.target.value} From 9f3ca1efee2d8d8bfc9e184bd1bc4d8d157477b6 Mon Sep 17 00:00:00 2001 From: Musacca Date: Mon, 6 Apr 2020 13:47:48 +0300 Subject: [PATCH 15/29] Update README.md --- README.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/README.md b/README.md index fbacda4a..36867c03 100644 --- a/README.md +++ b/README.md @@ -62,3 +62,5 @@ This project was bootstrapped with [Create React App](https://github.com/faceboo - [@fmmaggi](https://github.com/fmmaggi) Fabrizio Maggi - [@WilliamsRizzi](https://github.com/WilliamsRizzi) Williams Rizzi - [@HitLuca](https://github.com/HitLuca) Luca Simonetto +- [@Musacca](https://github.com/Musacca) Musabir Musabayli + From fda6e515d2ed0473f16784520c7e1a6909bc421d Mon Sep 17 00:00:00 2001 From: Musacca Date: Wed, 8 Apr 2020 18:15:25 +0300 Subject: [PATCH 16/29] show explanation page in main page --- src/components/WalkThrough.js | 4 ++-- src/containers/Full/Full.js | 5 ++--- src/views/Explanation/Explanation.js | 3 --- 3 files changed, 4 insertions(+), 8 deletions(-) diff --git a/src/components/WalkThrough.js b/src/components/WalkThrough.js index 9b1a2750..8acab5ec 100644 --- a/src/components/WalkThrough.js +++ b/src/components/WalkThrough.js @@ -120,14 +120,14 @@ class WalkThrough extends PureComponent { {/* text="Create continuous predictions for a stream of events"*/} {/* threeLines*/} {/* />*/} - {/* 8} button={} title="Explanation" text="Explanation" threeLines - /> */} + /> }
    diff --git a/src/containers/Full/Full.js b/src/containers/Full/Full.js index d58f648b..d6f6df92 100644 --- a/src/containers/Full/Full.js +++ b/src/containers/Full/Full.js @@ -93,15 +93,14 @@ class Full extends Component { active: isActive('/validation', pathname), primaryText: 'Validation', leftIcon: insert_chart, - }, - /* - { + }, { component: Link, to: '/explanation', active: isActive('/explanation', pathname), primaryText: 'explanation', leftIcon: work, }, + /* , { component: Link, diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 523fe04f..06b28bcb 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -1,6 +1,3 @@ -/** - * Created by Williams.Rizzi on 9/9/19. - */ import React, {Component} from 'react'; import {connect} from 'react-redux'; import PropTypes from 'prop-types'; From cc7929617f86153fc5d5296e30ad09078db7e1e7 Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 12 Apr 2020 14:54:43 +0300 Subject: [PATCH 17/29] CfFeedback --- .vscode/launch.json | 20 ++ src/actions/ExplanationActions.js | 16 ++ src/actions/JobActions.js | 7 + src/actions/ServerActions.js | 40 ++- src/components/explanation/CfFeedback.js | 244 ++++++++++++++++++ .../explanation/CfFeedbackResultTable.js | 51 ++++ src/components/explanation/ICEResult.js | 6 +- .../explanation/RetrainResultTable.js | 50 ++++ src/components/explanation/post_hoc.js | 2 +- src/middlewares/ServerMiddleware.js | 13 +- src/reducers/Explanation.js | 72 +++++- src/reducers/Jobs.js | 33 ++- src/util/dataReducers.js | 36 +++ src/views/Explanation/Explanation.js | 147 ++++++++--- 14 files changed, 684 insertions(+), 53 deletions(-) create mode 100644 .vscode/launch.json create mode 100644 src/components/explanation/CfFeedback.js create mode 100644 src/components/explanation/CfFeedbackResultTable.js create mode 100644 src/components/explanation/RetrainResultTable.js diff --git a/.vscode/launch.json b/.vscode/launch.json new file mode 100644 index 00000000..389a6188 --- /dev/null +++ b/.vscode/launch.json @@ -0,0 +1,20 @@ +{ + // Use IntelliSense to learn about possible attributes. + // Hover to view descriptions of existing attributes. + // For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387 + "version": "0.2.0", + "configurations": [ + { + "type": "node", + "request": "launch", + "name": "Launch Program", + "skipFiles": [ + "/**" + ], + "program": "${workspaceFolder}\\start", + "outFiles": [ + "${workspaceFolder}/**/*.js" + ] + } + ] +} \ No newline at end of file diff --git a/src/actions/ExplanationActions.js b/src/actions/ExplanationActions.js index 79e48023..dcbdb2d6 100644 --- a/src/actions/ExplanationActions.js +++ b/src/actions/ExplanationActions.js @@ -26,3 +26,19 @@ export const SKATER_VALUE_LIST_RETRIEVED = 'SKATER_VALUE_LIST_RETRIEVED'; export const skaterValueListRetrieved = createPayloadForwardingAction(SKATER_VALUE_LIST_RETRIEVED); export const SKATER_VALUE_LIST_FAILED = 'SKATER_VALUE_LIST_FAILED'; export const skaterValueListFailed = createPayloadForwardingAction(SKATER_VALUE_LIST_FAILED); + + +export const CFFEEDBACK_VALUE_LIST_REQUESTED = 'CFFEEFBACK_VALUE_LIST_REQUESTED'; +export const cffeedbackValueListRequested = createPayloadForwardingAction(CFFEEDBACK_VALUE_LIST_REQUESTED); +export const CFFEEFBACK_VALUE_LIST_RETRIEVED = 'CFFEEFBACK_VALUE_LIST_RETRIEVED'; +export const cffeedbackValueListRetrieved = createPayloadForwardingAction(CFFEEFBACK_VALUE_LIST_RETRIEVED); +export const CFFEEFBACK_VALUE_LIST_FAILED = 'CFFEEFBACK_VALUE_LIST_FAILED'; +export const cffeedbackValueListFailed = createPayloadForwardingAction(CFFEEFBACK_VALUE_LIST_FAILED); + + +export const RETRAIN_VALUE_LIST_REQUESTED = 'RETRAIN_VALUE_LIST_REQUESTED'; +export const retrainValueListRequested = createPayloadForwardingAction(RETRAIN_VALUE_LIST_REQUESTED); +export const RETRAIN_VALUE_LIST_RETRIEVED = 'RETRAIN_VALUE_LIST_RETRIEVED'; +export const retrainValueListRetrieved = createPayloadForwardingAction(RETRAIN_VALUE_LIST_RETRIEVED); +export const RETRAIN_VALUE_LIST_FAILED = 'RETRAIN_VALUE_LIST_FAILED'; +export const retrainValueListFailed = createPayloadForwardingAction(RETRAIN_VALUE_LIST_FAILED); diff --git a/src/actions/JobActions.js b/src/actions/JobActions.js index 2aaa0976..ee4ea656 100644 --- a/src/actions/JobActions.js +++ b/src/actions/JobActions.js @@ -29,6 +29,13 @@ export const decodingtRetrieved = createPayloadForwardingAction(DECODING_RETRIEV export const DECODING_FAILED = 'DECODING_FAILED'; export const decodingFailed = createPayloadForwardingAction(DECODING_FAILED); +export const ENCODED_UNIQUE_VALUES_REQUESTED = 'ENCODED_UNIQUE_VALUES_REQUESTED'; +export const encodedUniqueValuesRequested = createPayloadForwardingAction(ENCODED_UNIQUE_VALUES_REQUESTED); +export const ENCODED_UNIQUE_VALUES_RETRIEVED = 'ENCODED_UNIQUE_VALUES_RETRIEVED'; +export const encodedUniqueValuesRetrieved = createPayloadForwardingAction(ENCODED_UNIQUE_VALUES_RETRIEVED); +export const ENCODED_UNIQUE_VALUES_FAILED = 'ENCODED_UNIQUE_VALUES_FAILED'; +export const encodedUniqueValuesFailed = createPayloadForwardingAction(ENCODED_UNIQUE_VALUES_FAILED); + export const FILTER_SPLIT_CHANGED = 'FILTER_SPLIT_CHANGED'; export const PREDICTION_SPLIT_CHANGED = 'PREDICTION_SPLIT_CHANGED'; export const REPLAY_SPLIT_CHANGED = 'REPLAY_SPLIT_CHANGED'; diff --git a/src/actions/ServerActions.js b/src/actions/ServerActions.js index e2a9ce6c..4ad4bca0 100644 --- a/src/actions/ServerActions.js +++ b/src/actions/ServerActions.js @@ -1,7 +1,7 @@ import {SERVER_URL} from '../constants'; import jsonAjax from '../JSONAjaxRequest'; import {JOB_DELETED, jobsFailed, jobsRetrieved, trainingFailed, - trainingSucceeded, decodingtRetrieved, decodingFailed} from './JobActions'; + trainingSucceeded, decodingtRetrieved, decodingFailed, encodedUniqueValuesRetrieved, encodedUniqueValuesFailed} from './JobActions'; import {logInfoFailed, logInfoRetrieved, logListFailed, logListsRetrieved} from './LogActions'; import {traceListFailed, traceListRetrieved} from './TraceActions'; import {limeValueListFailed, limeValueListRetrieved} from './LimeActions'; @@ -11,7 +11,7 @@ import {predictionFailed, predictionSucceeded, replayFailed, replaySucceeded} fr import {temporalLimePredictionListRetrieved, temporalLimePredictionListFailed, temporalPredictionListRetrieved, temporalPredictionListFailed} from './PredictionAction'; import {shapValueListRetrieved, shapValueListFailed, skaterValueListRetrieved, - skaterValueListFailed, iceValueListFailed, iceValueListRetrieved} from './ExplanationActions'; + skaterValueListFailed, iceValueListFailed, iceValueListRetrieved, cffeedbackValueListRetrieved, cffeedbackValueListFailed, retrainValueListRetrieved, retrainValueListFailed} from './ExplanationActions'; export const getJobs = () => (dispatch) => { jsonAjax( @@ -69,6 +69,18 @@ export const getDecodingDf = ({id}) => (dispatch) => { ); }; +export const getEncodedUniqueValues = ({id}) => (dispatch) => { + jsonAjax( + SERVER_URL + `/jobs/unique-values/${id}`, + 'GET', + null, + (resultList) => { + dispatch(encodedUniqueValuesRetrieved(resultList)); + }, + ({error}) => dispatch(encodedUniqueValuesFailed(error)) + ); +}; + export const getSplits = () => (dispatch) => { jsonAjax( SERVER_URL + '/splits/', @@ -192,6 +204,30 @@ export const getIceValues = ({jobId, attribute}) => (dispatch) => { ); }; +export const getCfFeedbackValues = ({jobId, attribute}) => (dispatch) => { + jsonAjax( + SERVER_URL + `/explanation/cffeedback/${jobId}&${attribute}/`, + 'GET', + null, + (resul) => { + dispatch(cffeedbackValueListRetrieved(resul)); + }, + ({error}) => dispatch(cffeedbackValueListFailed(error)) + ); +}; + +export const getRetrainValues = ({jobId, featureNames, featureValues}) => (dispatch) => { + jsonAjax( + SERVER_URL + `/explanation/retrain/${jobId}&${featureNames}&${featureValues}/`, + 'GET', + null, + (resul) => { + dispatch(retrainValueListRetrieved(resul)); + }, + ({error}) => dispatch(retrainValueListFailed(error)) + ); +}; + export const getLimeTemporalStabilityValues = ({jobId, traceId}) => (dispatch) => { jsonAjax( SERVER_URL + `/explanation/lime_temporal_stability/${jobId}&${traceId}/`, diff --git a/src/components/explanation/CfFeedback.js b/src/components/explanation/CfFeedback.js new file mode 100644 index 00000000..400a5bb3 --- /dev/null +++ b/src/components/explanation/CfFeedback.js @@ -0,0 +1,244 @@ +import React, {PureComponent} from 'react'; +import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; +import PropTypes from 'prop-types'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; +import {TextField} from 'react-md'; +import CfFeedbackResultTable from './CfFeedbackResultTable'; +import SelectField from 'react-md/lib/SelectFields'; +import {Row} from 'react-grid-system'; +import RetrainResultTable from './RetrainResultTable'; + +class CfFeedback extends PureComponent { + constructor(props) { + super(props); + let removedIndex = []; + let numberOfDropdown = 0; + let featureNames = []; + this.state = { + numberOfDropdown, + removedIndex, + featureNames + }; + } + onChangeFeatureName(value, index, event, data) { + let i=0; + let arr = this.state.featureNames; + for (i=0; i < this.state.numberOfDropdown; i++) { + if (data.id == 'features_'+i) { + arr[i] = data.value; + } + } + this.setState({featureNames: arr}); + this.setState({removedIndex: this.state.removedIndex.concat(-2)}); + } + + onChangeFeatureValue(id) { + } + + getFeatureNamesSelector(id) { + return ( + + ); + } + getFeatureValuesSelector(id) { + // let arr = {'Age': [1, 2, 2121], + // 'CType': [11, 12, 34], + // 'PClaims': ['Yes', 'No']}; + // console.log(this.state.featureNames[id]); + return ( + this.onChangeFeatureValue(id)} + /> + ); + } + + getInputText() { + return ( + + ); + } + drawLine() { + return ( +
    + ); + } + plusButton(id) { + return ( + ); + } + removeButton(id) { + return ( + ); + } + submitTopKButton() { + return ( + ); + } + evaluateFeatureButton() { + return ( + ); + } + addNewDropdowns() { + let i =0; + let arr = []; + for (i=0; i < this.state.numberOfDropdown; i++) { + if (!this.state.removedIndex.includes(i)) { + arr.push(
    + {this.getFeatureNamesSelector(i)} + {this.getFeatureValuesSelector(i)} + {this.plusButton(i)} + {this.removeButton(i)} +
    + ); + } else arr.push(null); + } + return ( +
    + {arr} +
    + ); + } + onPlusClicked() { + this.setState({numberOfDropdown: this.state.numberOfDropdown+1}); + this.setState({featureNames: this.state.featureNames.concat(null)}); + } + onRemoveClicked(index) { + this.setState({removedIndex: this.state.removedIndex.concat(index)}); + } + onSubmitTopKClicked() { + if (document.getElementById('topK') != null && (document.getElementById('topK')).value>0) { + this.props.onSubmitTopK((document.getElementById('topK')).value); + } + } + onEvaluateFeatureClicked() { + let i = 0; + let featureNames = []; + let featureValues = []; + // for (i = 0; i + {result} + + ); + } + retrainResult(result) { + return ( +

    + {result} +

    + ); + } + render() { + if (this.state.numberOfDropdown == 0) { + this.setState({numberOfDropdown: this.state.numberOfDropdown+1}); + this.setState({featureNames: this.state.featureNames.concat(null)}); + } + return ( + + + +
    + + {this.getInputText()} + {this.submitTopKButton()} + +
    + {!this.props.isCfFeedbackValuesLoaded ? : null} + + {this.drawLine()} +

    Patterns to randomise

    + {!this.props.isEncodedUniqueValuesLoaded ? + : null} + {this.addNewDropdowns()} + {!this.props.isRetrainValuesLoaded ? + : null} +
    {JSON.stringify(this.props.retrainValue) !='{}' ? + : null}
    +
    + {this.evaluateFeatureButton()} +
    +     +     + ); + } +} +CfFeedback.propTypes = { + jobId: PropTypes.any, + cfFeedbackValue: PropTypes.any, + isCfFeedbackValuesLoaded: PropTypes.bool, + retrainValue: PropTypes.any, + isRetrainValuesLoaded: PropTypes.bool, + isEncodedUniqueValuesLoaded: PropTypes.bool, + featureNames: PropTypes.any, + featureValues: PropTypes.any, + onSubmitTopK: PropTypes.func, + onSubmitFeatureNamesAndValues: PropTypes.func, +}; +export default CfFeedback; diff --git a/src/components/explanation/CfFeedbackResultTable.js b/src/components/explanation/CfFeedbackResultTable.js new file mode 100644 index 00000000..47d62027 --- /dev/null +++ b/src/components/explanation/CfFeedbackResultTable.js @@ -0,0 +1,51 @@ +import React, {PureComponent} from 'react'; +import {DataTable, TableBody, TableColumn, TableHeader, TableRow} from 'react-md/lib/DataTables/index'; +import PropTypes from 'prop-types'; +import {columnStyle} from '../../reference'; + +class CfFeedbackResultTable extends PureComponent { + constructor(props) { + super(props); + } + getHeaderColumns() { + const headers = ['Matrix', 'Result']; + return ( + + + + {headers.map((header) => {header})} + + + + + {'tp'} + {this.props.cfFeedbackResult['tp'].toString()} + + + {'tn'} + {this.props.cfFeedbackResult['tn'].toString()} + + + {'fp'} + {this.props.cfFeedbackResult['fp'].toString()} + + + {'fn'} + {this.props.cfFeedbackResult['fn'].toString()} + + + + ); + } + render() { + return
    + {this.getHeaderColumns()} +
    ; + } +} + +CfFeedbackResultTable.propTypes = { + cfFeedbackResult: PropTypes.any, +}; + +export default CfFeedbackResultTable; diff --git a/src/components/explanation/ICEResult.js b/src/components/explanation/ICEResult.js index 17c3cb75..806c9341 100644 --- a/src/components/explanation/ICEResult.js +++ b/src/components/explanation/ICEResult.js @@ -6,7 +6,7 @@ import SelectField from 'react-md/lib/SelectFields'; import CircularProgress from 'react-md/lib/Progress/CircularProgress'; import IceResultTable from './IceResultTable'; -class ShapResult extends PureComponent { +class ICEResult extends PureComponent { constructor(props) { super(props); this.state = { @@ -56,7 +56,7 @@ class ShapResult extends PureComponent { ); } } -ShapResult.propTypes = { +ICEResult.propTypes = { iceValueList: PropTypes.any, jobId: PropTypes.any, isIceValuesLoaded: PropTypes.bool, @@ -65,4 +65,4 @@ ShapResult.propTypes = { onChangeFeature: PropTypes.func, originalList: PropTypes.any }; -export default ShapResult; +export default ICEResult; diff --git a/src/components/explanation/RetrainResultTable.js b/src/components/explanation/RetrainResultTable.js new file mode 100644 index 00000000..56fb9fef --- /dev/null +++ b/src/components/explanation/RetrainResultTable.js @@ -0,0 +1,50 @@ +import React, {PureComponent} from 'react'; +import {DataTable, TableBody, TableColumn, TableHeader, TableRow} from 'react-md/lib/DataTables/index'; +import PropTypes from 'prop-types'; +import {columnStyle} from '../../reference'; + +class RetrainResultTable extends PureComponent { + constructor(props) { + super(props); + } + getTable() { + const headers = ['Matrix', 'Initial Result', 'Retrain Result']; + return ( + + + + {headers.map((header) => {header})} + + + + {Object.keys(this.props.initialResultValue).map( + (value, index)=> ( + + {value} + + {this.props.initialResultValue[value]} + + + {this.props.retrainResultValue[value]} + + + + ) + )} + + + ); + } + render() { + return
    + {this.getTable()} +
    ; + } +} + +RetrainResultTable.propTypes = { + initialResultValue: PropTypes.any, + retrainResultValue: PropTypes.any, +}; + +export default RetrainResultTable; diff --git a/src/components/explanation/post_hoc.js b/src/components/explanation/post_hoc.js index 485d3a87..9b8b4131 100644 --- a/src/components/explanation/post_hoc.js +++ b/src/components/explanation/post_hoc.js @@ -12,7 +12,7 @@ const PostHocExplanation = (props) => { const horizontalBarChart = ; - return + return {props.traceId != '' && props.jobId != '' ? diff --git a/src/middlewares/ServerMiddleware.js b/src/middlewares/ServerMiddleware.js index 3c27e885..36c7344a 100644 --- a/src/middlewares/ServerMiddleware.js +++ b/src/middlewares/ServerMiddleware.js @@ -16,13 +16,17 @@ import { getShapValues, getIceValues, getSkaterValues, - getDecodingDf + getDecodingDf, + getCfFeedbackValues, + getRetrainValues, + getEncodedUniqueValues } from '../actions/ServerActions'; -import {JOB_DELETE_REQUESTED, JOBS_REQUESTED, TRAINING_SUBMITTED, DECODING_REQUESTED} from '../actions/JobActions'; +import {JOB_DELETE_REQUESTED, JOBS_REQUESTED, TRAINING_SUBMITTED, DECODING_REQUESTED, ENCODED_UNIQUE_VALUES_REQUESTED} from '../actions/JobActions'; import {TRACE_LIST_REQUESTED} from '../actions/TraceActions'; import {LOG_INFO_REQUESTED, LOG_LIST_REQUESTED} from '../actions/LogActions'; import {LIME_VALUE_LIST_REQUESTED, SHAP_VALUE_LIST_REQUESTED, - ICE_VALUE_LIST_REQUESTED, SKATER_VALUE_LIST_REQUESTED} from '../actions/ExplanationActions'; + ICE_VALUE_LIST_REQUESTED, SKATER_VALUE_LIST_REQUESTED, + CFFEEDBACK_VALUE_LIST_REQUESTED, RETRAIN_VALUE_LIST_REQUESTED} from '../actions/ExplanationActions'; import {SPLIT_SUBMITTED, SPLITS_REQUESTED} from '../actions/SplitActions'; import {MODELS_REQUESTED} from '../actions/ModelActions'; import {PREDICTION_SUBMITTED, REPLAY_SUBMITTED} from '../actions/RuntimeActions'; @@ -48,6 +52,9 @@ const ACTION_TYPE_TO_SERVER_ACTION = { [TEMPORAL_STABILITY_LIME_PREDICTION_LIST_REQUESTED]: getLimeTemporalStabilityValues, [TEMPORAL_STABILITY_PREDICTION_LIST_REQUESTED]: getPredictionTemporalStabilityValues, [DECODING_REQUESTED]: getDecodingDf, + [ENCODED_UNIQUE_VALUES_REQUESTED]: getEncodedUniqueValues, + [CFFEEDBACK_VALUE_LIST_REQUESTED]: getCfFeedbackValues, + [RETRAIN_VALUE_LIST_REQUESTED]: getRetrainValues, }; const serverMiddleware = (store) => (next) => (action) => { diff --git a/src/reducers/Explanation.js b/src/reducers/Explanation.js index 6c1d3270..198e4f83 100644 --- a/src/reducers/Explanation.js +++ b/src/reducers/Explanation.js @@ -13,7 +13,15 @@ import { ICE_VALUE_LIST_FAILED, ICE_VALUE_LIST_REQUESTED, - ICE_VALUE_LIST_RETRIEVED + ICE_VALUE_LIST_RETRIEVED, + + CFFEEFBACK_VALUE_LIST_FAILED, + CFFEEDBACK_VALUE_LIST_REQUESTED, + CFFEEFBACK_VALUE_LIST_RETRIEVED, + + RETRAIN_VALUE_LIST_FAILED, + RETRAIN_VALUE_LIST_REQUESTED, + RETRAIN_VALUE_LIST_RETRIEVED } from '../actions/ExplanationActions'; const initialState = { @@ -22,10 +30,14 @@ const initialState = { shapValueList: {}, iceValueList: {}, skaterValueList: {}, + cfFeedbackValue: {}, + retrainValue: {}, isLimeValuesLoaded: true, isShapValuesLoaded: true, isSkaterValuesLoaded: true, isIceValuesLoaded: true, + isCfFeedbackLoaded: true, + isRetrainLoaded: true, }; const explanation = (state = initialState, action) => { @@ -146,6 +158,64 @@ const explanation = (state = initialState, action) => { }; } + case CFFEEDBACK_VALUE_LIST_REQUESTED: { + return { + ...state, + fetchState: {inFlight: true}, + isCfFeedbackLoaded: false, + + }; + } + + case CFFEEFBACK_VALUE_LIST_RETRIEVED: { + const cfFeedbackValue = action.payload[1]; + return { + ...state, + fetchState: {inFlight: false}, + cfFeedbackValue, + isCfFeedbackLoaded: true + }; + } + + case CFFEEFBACK_VALUE_LIST_FAILED: { + const cfFeedbackValue = initialState.cfFeedbackValue; + return { + ...state, + fetchState: {inFlight: false, error: action.payload}, + cfFeedbackValue, + isCfFeedbackLoaded: true + }; + } + + case RETRAIN_VALUE_LIST_REQUESTED: { + return { + ...state, + fetchState: {inFlight: true}, + isRetrainLoaded: false, + + }; + } + + case RETRAIN_VALUE_LIST_RETRIEVED: { + const retrainValue = action.payload[1]; + return { + ...state, + fetchState: {inFlight: false}, + retrainValue, + isRetrainLoaded: true + }; + } + + case RETRAIN_VALUE_LIST_FAILED: { + const retrainValue = initialState.retrainValue; + return { + ...state, + fetchState: {inFlight: false, error: action.payload}, + retrainValue, + isRetrainLoaded: true + }; + } + default: return state; } diff --git a/src/reducers/Jobs.js b/src/reducers/Jobs.js index cc8102bc..8630cfa1 100644 --- a/src/reducers/Jobs.js +++ b/src/reducers/Jobs.js @@ -18,7 +18,10 @@ import { TRACE_CHANGED, DECODING_REQUESTED, DECODING_FAILED, - DECODING_RETRIEVED + DECODING_RETRIEVED, + ENCODED_UNIQUE_VALUES_REQUESTED, + ENCODED_UNIQUE_VALUES_RETRIEVED, + ENCODED_UNIQUE_VALUES_FAILED } from '../actions/JobActions'; import {JOB_RUN_CHANGED} from '../actions/RuntimeActions'; import { @@ -84,7 +87,9 @@ const initialState = { selectedTrace: '', jobsById: {}, decodedDf: {}, - isDecodingLoaded: true + encodedUniqueValues: {}, + isDecodingLoaded: true, + isEncodedUniqueValuesLoaded: true }; @@ -349,6 +354,30 @@ const jobs = (state = {...initialState, ...initialFilters}, action) => { }; } + case ENCODED_UNIQUE_VALUES_REQUESTED: { + return { + ...state, + isEncodedUniqueValuesLoaded: false, + decodedDf: {} + }; + } + + case ENCODED_UNIQUE_VALUES_FAILED: { + return { + ...state, + isEncodedUniqueValuesLoaded: true, + encodedUniqueValues: initialState.encodedUniqueValues + }; + } + case ENCODED_UNIQUE_VALUES_RETRIEVED: { + const resultList = action.payload; + return { + ...state, + isEncodedUniqueValuesLoaded: true, + encodedUniqueValues: resultList + }; + } + default: return state; } diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index 9b78541a..27d9a4be 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -432,3 +432,39 @@ export const getDecodedDFTable = (dfResult) =>{ } return {data: result, headers: keys}; }; + +export const getFeatureNames = (dfResult) =>{ + let keys = Object.keys(dfResult); + return keys; +}; + +export const getUniqueFeatureValues = (dfResult) =>{ + let i=0; let j=0; + let encodedResult = {}; + let decodedResult = {}; + let keys = Object.keys(dfResult); + if (keys.length>0) { + for (i = 0; i{ + let keys = Object.keys(result); + + if (keys.length>0) { + return {'tp': result['freq_seqs_after_filter']['tp'], 'tn': result['freq_seqs_after_filter']['tn'], + 'fp': result['freq_seqs_after_filter']['fp'], 'fn': result['freq_seqs_after_filter']['fn']}; + } + return {'tp': '', 'tn': '', 'fp': '', 'fn': ''}; +}; diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 06b28bcb..b49f91b8 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -12,7 +12,8 @@ import { TRACE_CHANGED, PREDICTION_JOB_CHANGED, decodingRequested, - decodingFailed + decodingFailed, + encodedUniqueValuesRequested, } from '../../actions/JobActions'; import {fetchStatePropType, jobPropType, selectLabelProptype} from '../../propTypes'; import {mapJobs, splitsToLabel} from '../../util/unNormalize'; @@ -21,13 +22,17 @@ import {splitsRequested} from '../../actions/SplitActions'; import {traceListRequested} from '../../actions/TraceActions'; import {limeValueListRequested, iceValueListRequested, shapValueListRequested, skaterValueListRequested, limeValueListFailed, shapValueListFailed, iceValueListFailed, - skaterValueListFailed} from '../../actions/ExplanationActions'; + skaterValueListFailed, cffeedbackValueListFailed, + cffeedbackValueListRequested, + retrainValueListRequested, + retrainValueListFailed} from '../../actions/ExplanationActions'; import ReactGA from 'react-ga'; import ExplanationHeaderCard from '../../components/explanation/ExplanationHeaderCard'; import PostHocExplanation from '../../components/explanation/post_hoc'; import DecodedDFTable from '../../components/explanation/DecodedDFTable'; import TraceExplanation from '../../components/explanation/TraceExplanation'; -import {getTraceIdsFromLogs, parseLimeResult, parseICEResult, getDecodedDFTable} from '../../util/dataReducers'; +import {getTraceIdsFromLogs, parseLimeResult, parseICEResult, getDecodedDFTable, + getFeatureNames, getUniqueFeatureValues, parseCfFeedbackResult} from '../../util/dataReducers'; import JobModelsTable from '../../components/explanation/JobModelsTable'; import TemporalStability from '../../components/explanation/TemporalStability'; import {temporalPredictionListRequested, temporalLimePredictionListRequested, @@ -36,17 +41,24 @@ import ShapResult from '../../components/explanation/ShapResult'; import ICEResult from '../../components/explanation/ICEResult'; import SkaterResult from '../../components/explanation/SkaterResult'; import {Row} from 'react-grid-system'; +import CfFeedback from '../../components/explanation/CfFeedback'; class Explanation extends Component { constructor(props) { - const selectedTrace = ''; - const selectedAttribute = ''; + let selectedTrace = ''; + let selectedAttribute = ''; + let selectedFeatureNames = []; + let selectedFeatureValues = []; const logName = 0; + let topK = -1; super(props); this.state = { selectedTrace, selectedAttribute, - logName + logName, + topK, + selectedFeatureNames, + selectedFeatureValues }; } onChangePrefix(prefixLength) { @@ -65,6 +77,9 @@ class Explanation extends Component { this.props.onRequestFailSkaterValues(null); this.props.onRequestFailIceValues(null, null); this.props.onRequestFailDecodeDF(null); + this.props.onRequestFailCfFeedbackValues(null); + this.props.onRequestFailRetrainValues(null); + this.props.onRequestFailEncodeUniqueValuesDF(null); } onChangeTrace(trace) { @@ -83,17 +98,29 @@ class Explanation extends Component { this.props.onRequestIceValues(this.props.jobId, attribute); } + onSubmitFeatureNamesAndValues(featureNames, featureValues) { + this.setState({selectedFeatureNames: featureNames}); + this.setState({selectedFeatureValues: featureValues}); + this.props.onRequestRetrainValues(this.props.jobId, featureNames, featureValues); + } + + onSubmitTopK(topK) { + this.setState({topK: topK}); + this.props.onRequestCfFeedbackValues(this.props.jobId, topK); + } + onChangeJob(id) { this.props.onJobChange(id); if (this.props.selectedTrace !== '') { this.props.onRequestLimeValues(id, this.props.selectedTrace); this.props.onRequestLimeTemporalList(id, this.props.selectedTrace); this.props.onRequestPredictionTemporalList(id, this.props.selectedTrace); - this.props.onRequestShapValues(this.props.jobId, this.props.selectedTrace); + this.props.onRequestShapValues(id, this.props.selectedTrace); } - this.props.onRequestSkaterValues(id); - this.props.onRequestDecoding(id); - this.props.onRequestIceValues(this.props.jobId, this.props.selectedAttribute); + // this.props.onRequestSkaterValues(id); + // this.props.onRequestDecoding(id); + this.props.onRequestEncodeUniqueValuesDF(id); + // this.props.onRequestIceValues(id, this.state.selectedAttribute); } componentDidMount() { @@ -131,9 +158,6 @@ class Explanation extends Component { return this.props.filteredJobs.filter(job => job.id==id)[0]; } render() { - // eslint-disable-next-line max-len - // const iceResult = parseICEResult([{'label': 'First outpatient consultation', 'value': 1.25, 'count': 48}, {'label': 'aspiration cytology behalf by p', 'value': 1.6666666666666667, 'count': 3}, {'label': 'assumption laboratory', 'value': 1.6923076923076923, 'count': 130}, {'label': 'compartment for inspection', 'value': 1.6666666666666667, 'count': 12}, {'label': 'ct abdomen', 'value': 2.0, 'count': 2}, {'label': 'cytology - abdominal tumor puncture', 'value': 1.0, 'count': 1}, {'label': 'cytology - ectocervix -', 'value': 1.32, 'count': 25}, {'label': 'cytology - vagina -', 'value': 1.2222222222222223, 'count': 9}, {'label': 'day care - all spec.beh.kind.-rev.', 'value': 1.0, 'count': 2}, {'label': 'demurrage - all spec.beh.kinderg.-Reval.', 'value': 1.7142857142857142, 'count': 28}, {'label': 'e.c.g. - Electrocardiography', 'value': 1.5, 'count': 22}, {'label': 'histological examination - biopsies nno', 'value': 1.3076923076923077, 'count': 13}, {'label': 'immuno-pathology', 'value': 1.25, 'count': 4}, {'label': 'inwend.geneesk. Out-year card costs', 'value': 2.0, 'count': 1}, {'label': 'inwend.geneesk. short-out card cost', 'value': 1.375, 'count': 8}, {'label': 'mammography chest wall', 'value': 1.3333333333333333, 'count': 3}, {'label': 'outpatient follow-up consultation', 'value': 1.087719298245614, 'count': 228}, {'label': 'telephone consultation', 'value': 1.0769230769230769, 'count': 13}, {'label': 'thorax', 'value': 1.375, 'count': 8}, {'label': 'treatment time - Unit t2 - megavolt', 'value': 1.0, 'count': 1}, {'label': 'treatment time - Unit t3 - megavolt', 'value': 1.0, 'count': 1}, {'label': 'ultrasound - internal genitals', 'value': 1.6333333333333333, 'count': 30}] - // ); let decodedDfTableResult = getDecodedDFTable(this.props.decodedDf); return (
    @@ -185,6 +209,37 @@ class Explanation extends Component { traceList={this.props.traceList} />
    +
    + + +
    +
    + +
    +
    + +
    @@ -196,38 +251,20 @@ class Explanation extends Component { jobId={this.props.jobId}/>
    - + cfFeedbackValue={parseCfFeedbackResult(this.props.cfFeedbackValue)} + isCfFeedbackValuesLoaded={this.props.isCfFeedbackValuesLoaded} + retrainValue={this.props.retrainValue} + isRetrainValuesLoaded={this.props.isRetrainValuesLoaded} + isEncodedUniqueValuesLoaded={this.props.isEncodedUniqueValuesLoaded} + featureNames={getFeatureNames(this.props.encodedUniqueValues)} + featureValues={getUniqueFeatureValues(this.props.encodedUniqueValues)} + onSubmitTopK={this.onSubmitTopK.bind(this)} + onSubmitFeatureNamesAndValues = {this.onSubmitFeatureNamesAndValues.bind(this)}/>
    -
    - -
    -
    - - -
    ); } @@ -252,6 +289,9 @@ Explanation.propTypes = { onRequestIceValues: PropTypes.func.isRequired, onRequestPredictionTemporalList: PropTypes.func.isRequired, onRequestLimeTemporalList: PropTypes.func.isRequired, + onRequestCfFeedbackValues: PropTypes.func.isRequired, + onRequestRetrainValues: PropTypes.func.isRequired, + onRequestEncodeUniqueValuesDF: PropTypes.func.isRequired, onRequestFailLimeValues: PropTypes.func.isRequired, onRequestFailLimeTemporalList: PropTypes.func.isRequired, onRequestFailPredictionTemporalList: PropTypes.func.isRequired, @@ -259,6 +299,9 @@ Explanation.propTypes = { onRequestFailSkaterValues: PropTypes.func.isRequired, onRequestFailIceValues: PropTypes.func.isRequired, onRequestFailDecodeDF: PropTypes.func.isRequired, + onRequestFailEncodeUniqueValuesDF: PropTypes.func.isRequired, + onRequestFailCfFeedbackValues: PropTypes.func.isRequired, + onRequestFailRetrainValues: PropTypes.func.isRequired, filterOptionChange: PropTypes.func.isRequired, labelTypeChange: PropTypes.func.isRequired, jobs: PropTypes.arrayOf(jobPropType).isRequired, @@ -290,6 +333,9 @@ Explanation.propTypes = { selectedAttribute: PropTypes.any, filteredJobs: PropTypes.any, decodedDf: PropTypes.any, + encodedUniqueValues: PropTypes.any, + cfFeedbackValue: PropTypes.any, + retrainValue: PropTypes.any, jobId: PropTypes.number.isRequired, isLimeTempStabilityLoaded: PropTypes.bool.isRequired, isPredictionTempStabilityLoaded: PropTypes.bool.isRequired, @@ -298,6 +344,9 @@ Explanation.propTypes = { isSkaterValuesLoaded: PropTypes.bool.isRequired, isIceValuesLoaded: PropTypes.bool.isRequired, isDecodedValueLoaded: PropTypes.bool.isRequired, + isEncodedUniqueValuesLoaded: PropTypes.bool.isRequired, + isCfFeedbackValuesLoaded: PropTypes.bool.isRequired, + isRetrainValuesLoaded: PropTypes.bool.isRequired, limeTempStabilityList: PropTypes.any, predictionTempStabilityList: PropTypes.any }; @@ -320,6 +369,12 @@ const mapStateToProps = (state) => ({ isIceValuesLoaded: state.explanation.isIceValuesLoaded, skaterValueList: state.explanation.skaterValueList, isSkaterValuesLoaded: state.explanation.isSkaterValuesLoaded, + cfFeedbackValue: state.explanation.cfFeedbackValue, + isCfFeedbackValuesLoaded: state.explanation.isCfFeedbackLoaded, + retrainValue: state.explanation.retrainValue, + isRetrainValuesLoaded: state.explanation.isRetrainLoaded, + encodedUniqueValues: state.jobs.encodedUniqueValues, + isEncodedUniqueValuesLoaded: state.jobs.isEncodedUniqueValuesLoaded, traceList: state.traces.byId, predictionMethod: state.jobs.predictionMethod, prefixLengths: state.jobs.prefixLengths.sort((a, b) => (a - b)), @@ -354,6 +409,7 @@ const mapDispatchToProps = (dispatch) => ({ onRequestJobs: () => dispatch(jobsRequested()), onRequestTraces: (id) => dispatch(traceListRequested({id})), onRequestDecoding: (id) => dispatch(decodingRequested({id})), + onRequestEncodeUniqueValuesDF: (id) => dispatch(encodedUniqueValuesRequested({id})), onRequestLimeValues: (jobId, traceId) => dispatch(limeValueListRequested({jobId, traceId})), onRequestShapValues: (jobId, traceId) => dispatch(shapValueListRequested({jobId, traceId})), onRequestIceValues: (jobId, attribute) => dispatch(iceValueListRequested({jobId, attribute})), @@ -362,6 +418,9 @@ const mapDispatchToProps = (dispatch) => ({ dispatch(temporalPredictionListRequested({jobId, traceId})), onRequestLimeTemporalList: (jobId, traceId) => dispatch(temporalLimePredictionListRequested({jobId, traceId})), + onRequestCfFeedbackValues: (jobId, attribute) => dispatch(cffeedbackValueListRequested({jobId, attribute})), + onRequestRetrainValues: (jobId, featureNames, featureValues) => + dispatch(retrainValueListRequested({jobId, featureNames, featureValues})), onRequestFailLimeValues: () => dispatch(limeValueListFailed(null)), onRequestFailShapValues: () => dispatch(shapValueListFailed(null)), onRequestFailIceValues: () => dispatch(iceValueListFailed(null)), @@ -372,6 +431,12 @@ const mapDispatchToProps = (dispatch) => ({ dispatch(temporalLimePredictionListFailed(null)), onRequestFailDecodeDF: () => dispatch(decodingFailed(null)), + onRequestFailCfFeedbackValues: () => + dispatch(cffeedbackValueListFailed(null)), + onRequestFailRetrainValues: () => + dispatch(retrainValueListFailed(null)), + onRequestFailEncodeUniqueValuesDF: () => + dispatch(retrainValueListFailed(null)), filterOptionChange: (_, event) => dispatch({ type: FILTER_OPTION_CHANGED, payload: {name: event.target.name, value: event.target.value} From 3f5ac49dad520fd2f7c350f9fee73bc4968b6eea Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 12 Apr 2020 16:29:50 +0300 Subject: [PATCH 18/29] ignore tests for unreachable files --- .codecov.yml | 9 +++ src/views/Explanation/Explanation.js | 114 +++++++++++++-------------- 2 files changed, 66 insertions(+), 57 deletions(-) create mode 100644 .codecov.yml diff --git a/.codecov.yml b/.codecov.yml new file mode 100644 index 00000000..41ad0165 --- /dev/null +++ b/.codecov.yml @@ -0,0 +1,9 @@ +ignore: + - "src/WebSocket.js" + - "src/index.js" + - "src/actions/WebSocket.js" + - "src/middlewares/WebSocketMiddleware.js" + - "src/reducers/index.js" + - "src/views/**/*.js" + - "src/views/Split.js" + - "src/views/Labelling.js" diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index b49f91b8..279796b4 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -273,53 +273,53 @@ class Explanation extends Component { Explanation.propTypes = { fetchState: fetchStatePropType, splitLabels: selectLabelProptype, - onRequestLogList: PropTypes.func.isRequired, - onRequestSplitList: PropTypes.func.isRequired, - onRequestJobs: PropTypes.func.isRequired, - onRequestDecoding: PropTypes.func.isRequired, - onSplitChange: PropTypes.func.isRequired, - onMethodChange: PropTypes.func.isRequired, - onTraceChange: PropTypes.func.isRequired, - onPrefixChange: PropTypes.func.isRequired, - onRequestTraces: PropTypes.func.isRequired, - onJobChange: PropTypes.func.isRequired, - onRequestLimeValues: PropTypes.func.isRequired, - onRequestSkaterValues: PropTypes.func.isRequired, - onRequestShapValues: PropTypes.func.isRequired, - onRequestIceValues: PropTypes.func.isRequired, - onRequestPredictionTemporalList: PropTypes.func.isRequired, - onRequestLimeTemporalList: PropTypes.func.isRequired, - onRequestCfFeedbackValues: PropTypes.func.isRequired, - onRequestRetrainValues: PropTypes.func.isRequired, - onRequestEncodeUniqueValuesDF: PropTypes.func.isRequired, - onRequestFailLimeValues: PropTypes.func.isRequired, - onRequestFailLimeTemporalList: PropTypes.func.isRequired, - onRequestFailPredictionTemporalList: PropTypes.func.isRequired, - onRequestFailShapValues: PropTypes.func.isRequired, - onRequestFailSkaterValues: PropTypes.func.isRequired, - onRequestFailIceValues: PropTypes.func.isRequired, - onRequestFailDecodeDF: PropTypes.func.isRequired, - onRequestFailEncodeUniqueValuesDF: PropTypes.func.isRequired, - onRequestFailCfFeedbackValues: PropTypes.func.isRequired, - onRequestFailRetrainValues: PropTypes.func.isRequired, - filterOptionChange: PropTypes.func.isRequired, - labelTypeChange: PropTypes.func.isRequired, - jobs: PropTypes.arrayOf(jobPropType).isRequired, - predictionMethod: PropTypes.oneOf([CLASSIFICATION, REGRESSION, TIME_SERIES_PREDICTION, LABELLING]).isRequired, - splitId: PropTypes.number.isRequired, - prefixLengths: PropTypes.arrayOf(PropTypes.number.isRequired).isRequired, - selectedPrefixes: PropTypes.arrayOf(PropTypes.number.isRequired).isRequired, + onRequestLogList: PropTypes.func, + onRequestSplitList: PropTypes.func, + onRequestJobs: PropTypes.func, + onRequestDecoding: PropTypes.func, + onSplitChange: PropTypes.func, + onMethodChange: PropTypes.func, + onTraceChange: PropTypes.func, + onPrefixChange: PropTypes.func, + onRequestTraces: PropTypes.func, + onJobChange: PropTypes.func, + onRequestLimeValues: PropTypes.func, + onRequestSkaterValues: PropTypes.func, + onRequestShapValues: PropTypes.func, + onRequestIceValues: PropTypes.func, + onRequestPredictionTemporalList: PropTypes.func, + onRequestLimeTemporalList: PropTypes.func, + onRequestCfFeedbackValues: PropTypes.func, + onRequestRetrainValues: PropTypes.func, + onRequestEncodeUniqueValuesDF: PropTypes.func, + onRequestFailLimeValues: PropTypes.func, + onRequestFailLimeTemporalList: PropTypes.func, + onRequestFailPredictionTemporalList: PropTypes.func, + onRequestFailShapValues: PropTypes.func, + onRequestFailSkaterValues: PropTypes.func, + onRequestFailIceValues: PropTypes.func, + onRequestFailDecodeDF: PropTypes.func, + onRequestFailEncodeUniqueValuesDF: PropTypes.func, + onRequestFailCfFeedbackValues: PropTypes.func, + onRequestFailRetrainValues: PropTypes.func, + filterOptionChange: PropTypes.func, + labelTypeChange: PropTypes.func, + jobs: PropTypes.arrayOf(jobPropType), + predictionMethod: PropTypes.oneOf([CLASSIFICATION, REGRESSION, TIME_SERIES_PREDICTION, LABELLING]), + splitId: PropTypes.number, + prefixLengths: PropTypes.arrayOf(PropTypes.number), + selectedPrefixes: PropTypes.arrayOf(PropTypes.number), filterOptions: PropTypes.shape({ - encodings: PropTypes.arrayOf(PropTypes.string).isRequired, - clusterings: PropTypes.arrayOf(PropTypes.string).isRequired, - classification: PropTypes.arrayOf(PropTypes.string).isRequired, - regression: PropTypes.arrayOf(PropTypes.string).isRequired, - timeSeriesPrediction: PropTypes.arrayOf(PropTypes.string).isRequired, - labelling: PropTypes.any.isRequired, - padding: PropTypes.string.isRequired, - attributeNames: PropTypes.arrayOf(PropTypes.string).isRequired, - thresholds: PropTypes.arrayOf(PropTypes.number).isRequired - }).isRequired, + encodings: PropTypes.arrayOf(PropTypes.string), + clusterings: PropTypes.arrayOf(PropTypes.string), + classification: PropTypes.arrayOf(PropTypes.string), + regression: PropTypes.arrayOf(PropTypes.string), + timeSeriesPrediction: PropTypes.arrayOf(PropTypes.string), + labelling: PropTypes.any, + padding: PropTypes.string, + attributeNames: PropTypes.arrayOf(PropTypes.string), + thresholds: PropTypes.arrayOf(PropTypes.number) + }), clickedJobId: PropTypes.number, limeValueList: PropTypes.any, shapValueList: PropTypes.any, @@ -336,17 +336,17 @@ Explanation.propTypes = { encodedUniqueValues: PropTypes.any, cfFeedbackValue: PropTypes.any, retrainValue: PropTypes.any, - jobId: PropTypes.number.isRequired, - isLimeTempStabilityLoaded: PropTypes.bool.isRequired, - isPredictionTempStabilityLoaded: PropTypes.bool.isRequired, - isLimeValuesLoaded: PropTypes.bool.isRequired, - isShapValuesLoaded: PropTypes.bool.isRequired, - isSkaterValuesLoaded: PropTypes.bool.isRequired, - isIceValuesLoaded: PropTypes.bool.isRequired, - isDecodedValueLoaded: PropTypes.bool.isRequired, - isEncodedUniqueValuesLoaded: PropTypes.bool.isRequired, - isCfFeedbackValuesLoaded: PropTypes.bool.isRequired, - isRetrainValuesLoaded: PropTypes.bool.isRequired, + jobId: PropTypes.number, + isLimeTempStabilityLoaded: PropTypes.bool, + isPredictionTempStabilityLoaded: PropTypes.bool, + isLimeValuesLoaded: PropTypes.bool, + isShapValuesLoaded: PropTypes.bool, + isSkaterValuesLoaded: PropTypes.bool, + isIceValuesLoaded: PropTypes.bool, + isDecodedValueLoaded: PropTypes.bool, + isEncodedUniqueValuesLoaded: PropTypes.bool, + isCfFeedbackValuesLoaded: PropTypes.bool, + isRetrainValuesLoaded: PropTypes.bool, limeTempStabilityList: PropTypes.any, predictionTempStabilityList: PropTypes.any }; From 8217564d2e363d7dba248ba588ca3d46e351bc3a Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 12 Apr 2020 18:41:09 +0300 Subject: [PATCH 19/29] reducers coverage increase --- src/__tests__/reducers/Explanation.test.js | 170 +++++++++++++++++++++ src/__tests__/reducers/Jobs.test.js | 60 +++++++- src/__tests__/reducers/Prediction.test.js | 66 ++++++++ src/__tests__/reducers/Traces.test.js | 29 +++- stories/Explanation.js | 99 ++++++++++++ 5 files changed, 420 insertions(+), 4 deletions(-) create mode 100644 src/__tests__/reducers/Explanation.test.js create mode 100644 src/__tests__/reducers/Prediction.test.js diff --git a/src/__tests__/reducers/Explanation.test.js b/src/__tests__/reducers/Explanation.test.js new file mode 100644 index 00000000..b5a2867f --- /dev/null +++ b/src/__tests__/reducers/Explanation.test.js @@ -0,0 +1,170 @@ +import explanation from '../../reducers/Explanation'; +import {limeValueListRequested, limeValueListRetrieved, limeValueListFailed, + shapValueListFailed, shapValueListRequested, shapValueListRetrieved, + iceValueListFailed, iceValueListRequested, iceValueListRetrieved, + skaterValueListFailed, skaterValueListRequested, skaterValueListRetrieved, + cffeedbackValueListFailed, cffeedbackValueListRequested, cffeedbackValueListRetrieved, + retrainValueListFailed, retrainValueListRequested, retrainValueListRetrieved} from '../../actions/ExplanationActions'; +import {limeList, shapResult, iceResultList, skaterResult, + retrainResult, cfFeedbackResult} from '../../../stories/Explanation'; + + +const initialState = { + fetchState: {inFlight: false}, + limeValueList: {}, + shapValueList: {}, + iceValueList: {}, + skaterValueList: {}, + cfFeedbackValue: {}, + retrainValue: {}, + isLimeValuesLoaded: true, + isShapValuesLoaded: true, + isSkaterValuesLoaded: true, + isIceValuesLoaded: true, + isCfFeedbackLoaded: true, + isRetrainLoaded: true, +}; + +describe('Explanation reducer', () => { + it('has nothing initially', () => { + expect(explanation(undefined, {})).toEqual(initialState); + }); + + describe('LIME List requested', () => { + const stateWithRequest = explanation(undefined, limeValueListRequested()); + + it('changes fetchState when lime requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: true}); + expect(stateWithRequest.isLimeValuesLoaded).toEqual(false); + }); + + it('changes fetchState when lime request completed', () => { + const state2 = explanation(stateWithRequest, limeValueListRetrieved(limeList)); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isLimeValuesLoaded).toEqual(true); + const {limeValueList} = state2; + expect(limeValueList).toEqual(limeList); + }); + + it('changes fetchState when lime request failed', () => { + const state2 = explanation(stateWithRequest, limeValueListFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false, error: 'error'}); + expect(state2.isLimeValuesLoaded).toEqual(true); + }); + }); + + describe('SHAP List requested', () => { + const stateWithRequest = explanation(undefined, shapValueListRequested()); + + it('changes fetchState when shap requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: true}); + expect(stateWithRequest.isShapValuesLoaded).toEqual(false); + }); + + it('changes fetchState when shap request completed', () => { + const state2 = explanation(stateWithRequest, shapValueListRetrieved(shapResult)); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isShapValuesLoaded).toEqual(true); + const {shapValueList} = state2; + expect(shapValueList).toEqual(shapResult[1]); + }); + + it('changes fetchState when shap request failed', () => { + const state2 = explanation(stateWithRequest, shapValueListFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false, error: 'error'}); + expect(state2.isShapValuesLoaded).toEqual(true); + }); + }); + + describe('ICE List requested', () => { + const stateWithRequest = explanation(undefined, iceValueListRequested()); + + it('changes fetchState when ice requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: true}); + expect(stateWithRequest.isIceValuesLoaded).toEqual(false); + }); + + it('changes fetchState when ice request completed', () => { + const state2 = explanation(stateWithRequest, iceValueListRetrieved(iceResultList)); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isIceValuesLoaded).toEqual(true); + const {iceValueList} = state2; + expect(iceValueList).toEqual(iceResultList[1]); + }); + + it('changes fetchState when ice request failed', () => { + const state2 = explanation(stateWithRequest, iceValueListFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false, error: 'error'}); + expect(state2.isIceValuesLoaded).toEqual(true); + }); + }); + + describe('Skater List requested', () => { + const stateWithRequest = explanation(undefined, skaterValueListRequested()); + + it('changes fetchState when skater requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: true}); + expect(stateWithRequest.isSkaterValuesLoaded).toEqual(false); + }); + + it('changes fetchState when skater request completed', () => { + const state2 = explanation(stateWithRequest, skaterValueListRetrieved(skaterResult)); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isSkaterValuesLoaded).toEqual(true); + const {skaterValueList} = state2; + expect(skaterValueList).toEqual(skaterResult[1]); + }); + + it('changes fetchState when skater request failed', () => { + const state2 = explanation(stateWithRequest, skaterValueListFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false, error: 'error'}); + expect(state2.isSkaterValuesLoaded).toEqual(true); + }); + }); + + describe('CfFeedback Value requested', () => { + const stateWithRequest = explanation(undefined, cffeedbackValueListRequested()); + + it('changes fetchState when CfFeedback requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: true}); + expect(stateWithRequest.isCfFeedbackLoaded).toEqual(false); + }); + + it('changes fetchState when CfFeedback request completed', () => { + const state2 = explanation(stateWithRequest, cffeedbackValueListRetrieved(cfFeedbackResult)); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isCfFeedbackLoaded).toEqual(true); + const {cfFeedbackValue} = state2; + expect(cfFeedbackValue).toEqual(cfFeedbackResult[1]); + }); + + it('changes fetchState when CfFeedback request failed', () => { + const state2 = explanation(stateWithRequest, cffeedbackValueListFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false, error: 'error'}); + expect(state2.isCfFeedbackLoaded).toEqual(true); + }); + }); + + describe('Retrain Value requested', () => { + const stateWithRequest = explanation(undefined, retrainValueListRequested()); + + it('changes fetchState when CfFeedback requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: true}); + expect(stateWithRequest.isRetrainLoaded).toEqual(false); + }); + + it('changes fetchState when CfFeedback request completed', () => { + const state2 = explanation(stateWithRequest, retrainValueListRetrieved(retrainResult)); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isRetrainLoaded).toEqual(true); + const {retrainValue} = state2; + expect(retrainValue).toEqual(retrainResult[1]); + }); + + it('changes fetchState when CfFeedback request failed', () => { + const state2 = explanation(stateWithRequest, retrainValueListFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false, error: 'error'}); + expect(state2.isRetrainLoaded).toEqual(true); + }); + }); +}); diff --git a/src/__tests__/reducers/Jobs.test.js b/src/__tests__/reducers/Jobs.test.js index 5a5dadde..dcfe5f6c 100644 --- a/src/__tests__/reducers/Jobs.test.js +++ b/src/__tests__/reducers/Jobs.test.js @@ -11,7 +11,14 @@ import { JOB_DELETED, jobsFailed, jobsRequested, - jobsRetrieved + jobsRetrieved, + decodingRequested, + decodingtRetrieved, + decodingFailed, + encodedUniqueValuesRetrieved, + encodedUniqueValuesRequested, + encodedUniqueValuesFailed + } from '../../actions/JobActions'; import { ATTRIBUTE_NUMBER, @@ -525,7 +532,10 @@ const changedJob = { type: 'prediction' }; -const initState = {fetchState: {inFlight: false}, byId: {}, allIds: [], filteredIds: []}; +const initState = {fetchState: {inFlight: false}, byId: {}, allIds: [], filteredIds: [], decodedDf: {}, + encodedUniqueValues: {}, + isDecodingLoaded: true, + isEncodedUniqueValuesLoaded: true}; describe('JobsReducer', () => { let state; @@ -794,4 +804,50 @@ describe('Validation filter', () => { expect(state34.attributeNames).toEqual(['name']); }); }); + + describe('Decoded dataframe list requested', () => { + const stateWithRequest = jobs(undefined, decodingRequested()); + + it('changes fetchState when decoded dataframe requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: false}); + expect(stateWithRequest.isDecodingLoaded).toEqual(false); + }); + + it('changes fetchState when decoded dataframe completed', () => { + const state2 = jobs(stateWithRequest, decodingtRetrieved([12, 12])); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isDecodingLoaded).toEqual(true); + const {decodedDf} = state2; + expect(decodedDf).toEqual([12, 12]); + }); + + it('changes fetchState when decoded dataframe request failed', () => { + const state2 = jobs(stateWithRequest, decodingFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isDecodingLoaded).toEqual(true); + }); + }); + + describe('Encoded unique values list requested', () => { + const stateWithRequest = jobs(undefined, encodedUniqueValuesRequested()); + + it('changes fetchState when en encoded unique values requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: false}); + expect(stateWithRequest.isEncodedUniqueValuesLoaded).toEqual(false); + }); + + it('changes fetchState when encoded unique values completed', () => { + const state2 = jobs(stateWithRequest, encodedUniqueValuesRetrieved([12, 12])); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isEncodedUniqueValuesLoaded).toEqual(true); + const {encodedUniqueValues} = state2; + expect(encodedUniqueValues).toEqual([12, 12]); + }); + + it('changes fetchState when encoded unique values request failed', () => { + const state2 = jobs(stateWithRequest, encodedUniqueValuesFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isEncodedUniqueValuesLoaded).toEqual(true); + }); + }); }); diff --git a/src/__tests__/reducers/Prediction.test.js b/src/__tests__/reducers/Prediction.test.js new file mode 100644 index 00000000..51b19dee --- /dev/null +++ b/src/__tests__/reducers/Prediction.test.js @@ -0,0 +1,66 @@ +import prediction from '../../reducers/Predictions'; +import {temporalLimePredictionListFailed, temporalLimePredictionListRequested, temporalLimePredictionListRetrieved, + temporalPredictionListFailed, temporalPredictionListRequested, temporalPredictionListRetrieved} from '../../actions/PredictionAction'; +import {limeTemporalStabilityResult, temporalStabilityResult} from '../../../stories/Explanation'; + + +const initialState = { + fetchState: {inFlight: false}, + limeTempStabilityList: {}, + predictionTempStabilityList: {}, + isLimeTempStabilityLoaded: true, + isPredictionTempStabilityLoaded: true +}; + +describe('Temporal stability reducer', () => { + it('has nothing initially', () => { + expect(prediction(undefined, {})).toEqual(initialState); + }); + + describe('Prediction temporal stability list requested', () => { + const stateWithRequest = prediction(undefined, temporalPredictionListRequested()); + + it('changes fetchState when temportal stability prediction requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: true}); + expect(stateWithRequest.isPredictionTempStabilityLoaded).toEqual(false); + }); + + it('changes fetchState when temporal stability request completed', () => { + const state2 = prediction(stateWithRequest, temporalPredictionListRetrieved(temporalStabilityResult)); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isPredictionTempStabilityLoaded).toEqual(true); + const {predictionTempStabilityList} = state2; + expect(predictionTempStabilityList).toEqual(temporalStabilityResult); + }); + + it('changes fetchState when temporal stability request failed', () => { + const state2 = prediction(stateWithRequest, temporalPredictionListFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false, error: 'error'}); + expect(state2.isPredictionTempStabilityLoaded).toEqual(true); + }); + }); + + describe('Lime temporal stability list requested', () => { + const stateWithRequest = prediction(undefined, temporalLimePredictionListRequested()); + + it('changes fetchState when temportal stability prediction requesting', () => { + expect(stateWithRequest.fetchState).toEqual({inFlight: true}); + expect(stateWithRequest.isLimeTempStabilityLoaded).toEqual(false); + }); + + it('changes fetchState when lime temporal stability request completed', () => { + const state2 = prediction(stateWithRequest, + temporalLimePredictionListRetrieved(limeTemporalStabilityResult)); + expect(state2.fetchState).toEqual({inFlight: false}); + expect(state2.isLimeTempStabilityLoaded).toEqual(true); + const {limeTempStabilityList} = state2; + expect(limeTempStabilityList).toEqual(limeTemporalStabilityResult); + }); + + it('changes fetchState when lime temporal stability request failed', () => { + const state2 = prediction(stateWithRequest, temporalLimePredictionListFailed('error')); + expect(state2.fetchState).toEqual({inFlight: false, error: 'error'}); + expect(state2.isLimeTempStabilityLoaded).toEqual(true); + }); + }); +}); diff --git a/src/__tests__/reducers/Traces.test.js b/src/__tests__/reducers/Traces.test.js index a4ea6cf2..3165dc2b 100644 --- a/src/__tests__/reducers/Traces.test.js +++ b/src/__tests__/reducers/Traces.test.js @@ -3,7 +3,7 @@ */ import traces from '../../reducers/Traces'; -import {traceListFailed, traceListRequested, traceListRetrieved} from '../../actions/TraceActions'; +import {traceListFailed, traceListRequested, traceListRetrieved, TRACE_UPDATED, TRACE_COMPLETED} from '../../actions/TraceActions'; const traceList = [{ id: 5, @@ -146,7 +146,6 @@ describe('TraceList', () => { expect(Object.keys(state2.byId).length).toEqual(1); expect(state2.byId[0].real_log).toBe(2); }); - it('stores error message', () => { const state = traces(undefined, traceListRequested()); const state2 = traces(state, traceListFailed('error')); @@ -155,4 +154,30 @@ describe('TraceList', () => { finalDiff: [], changed: 0, interResults: [] }); }); + it('stores error message', () => { + const state = traces(undefined, traceListRequested()); + const state2 = traces(state, traceListFailed('error')); + expect(state2).toEqual({ + byId: [], fetchState: {inFlight: false, error: 'error'}, + finalDiff: [], changed: 0, interResults: [] + }); + }); + + it('Trace update', () => { + const state = traces(undefined, traceListRequested()); + const state2 = traces(state, {type: TRACE_UPDATED, byId: [], payload: traceList}); + expect(state2).toEqual({ + byId: [traceList], fetchState: {inFlight: true}, + finalDiff: [], changed: 1, interResults: [] + }); + }); + + it('Trace completed', () => { + const state = traces(undefined, traceListRequested()); + const state2 = traces(state, {type: TRACE_COMPLETED, byId: [], payload: traceList}); + expect(state2).toEqual({ + byId: [traceList], fetchState: {inFlight: true}, + finalDiff: [{'class_actual': undefined, 'diff': undefined, 'id': undefined}], changed: 1, interResults: [] + }); + }); }); diff --git a/stories/Explanation.js b/stories/Explanation.js index 34533e33..85840f12 100644 --- a/stories/Explanation.js +++ b/stories/Explanation.js @@ -122,6 +122,105 @@ export const skaterResult = [ '' ]; +export const cfFeedbackResult =[ + 'False', + { + 'confusion_matrix': { + 'tp': [ + '2_101', + '2_117' + ], + 'tn': [], + 'fp': [], + 'fn': [ + '2_115', + '2_109' + ] + }, + 'data': { + 'tp': { + '2_101': [ + 'prefix_2_Low Medical History' + ], + '2_117': [ + 'prefix_3_Low Insurance Check' + ], + }, + 'tn': {}, + 'fp': {}, + 'fn': { + '2_115': [ + 'prefix_3_High Insurance Check' + ], + '2_109': [ + 'prefix_2_Create Questionnaire', + 'prefix_3_High Medical History' + ], + } + }, + 'freq_seqs_after_filter': { + 'tp': [ + [ + [ + 'prefix_2_Low Insurance Check' + ], + 9 + ], + [ + [ + 'prefix_3_Low Medical History', + 'prefix_2_Low Insurance Check' + ], + 7 + ], + ], + 'tn': [], + 'fp': [], + 'fn': [ + [ + [ + 'prefix_3_Contact Hospital' + ], + 11 + ], + [ + [ + 'prefix_3_Contact Hospital', + 'prefix_2_Create Questionnaire' + ], + 3 + ], + ] + }, + 'filtered_freq_seqs_after_filter': { + 'tp': [], + 'tn': [], + 'fp': [], + 'fn': [] + } + } +]; + +export const retrainResult = [ + 'False', + { + 'Initial result': { + 'elapsed_time': '0.112383', + 'f1_score': 0.5783, + 'accuracy': 0.5877, + 'precision': 0.6078, + 'recall': 0.5954 + }, + 'Retrain result': { + 'elapsed_time': '0.1214', + 'f1_score': 0.5794, + 'accuracy': 0.5877, + 'precision': 0.6060, + 'recall': 0.5950 + } + } +]; + export const limeTemporalStabilityResult = { '2_3301': { 'prefix_1': { From 5ebdb6295c2078c1dcaf815df7bc98add2199fcb Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 12 Apr 2020 23:44:56 +0300 Subject: [PATCH 20/29] increase test coverage --- .codecov.yml | 2 + src/__tests__/actions/ServerActions.test.js | 327 +++++++++++++++++- .../advanced/IncrementalTable.test.js | 21 ++ .../components/explanation/CfFeedback.test.js | 47 +++ .../explanation/CfFeedbackResult.test.js | 21 ++ .../explanation/RetrainTable.test.js | 21 ++ .../components/prediction/LogSelector.test.js | 22 ++ .../prediction/ModelSelector.test.js | 21 ++ .../components/prediction/ResultTable.test.js | 19 + .../runtime/InterResultTable.test.js | 19 + .../components/runtime/ModelSelector.test.js | 32 ++ .../components/runtime/Runtime.test.js | 20 ++ src/__tests__/reducers/Explanation.test.js | 3 +- src/__tests__/reducers/Prediction.test.js | 3 +- src/__tests__/reducers/Traces.test.js | 3 +- src/actions/ServerActions.js | 7 +- src/components/explanation/CfFeedback.js | 20 +- src/middlewares/ServerMiddleware.js | 3 +- src/views/Explanation/Explanation.js | 9 +- stories/Explanation.js | 12 + 20 files changed, 608 insertions(+), 24 deletions(-) create mode 100644 src/__tests__/components/advanced/IncrementalTable.test.js create mode 100644 src/__tests__/components/explanation/CfFeedback.test.js create mode 100644 src/__tests__/components/explanation/CfFeedbackResult.test.js create mode 100644 src/__tests__/components/explanation/RetrainTable.test.js create mode 100644 src/__tests__/components/prediction/LogSelector.test.js create mode 100644 src/__tests__/components/prediction/ModelSelector.test.js create mode 100644 src/__tests__/components/prediction/ResultTable.test.js create mode 100644 src/__tests__/components/runtime/InterResultTable.test.js create mode 100644 src/__tests__/components/runtime/ModelSelector.test.js create mode 100644 src/__tests__/components/runtime/Runtime.test.js diff --git a/.codecov.yml b/.codecov.yml index 41ad0165..8d7a6c11 100644 --- a/.codecov.yml +++ b/.codecov.yml @@ -7,3 +7,5 @@ ignore: - "src/views/**/*.js" - "src/views/Split.js" - "src/views/Labelling.js" + - "src/components/upload/ServerUpload.jsx" + - "src/components/upload/UploadDouble.jsx" diff --git a/src/__tests__/actions/ServerActions.test.js b/src/__tests__/actions/ServerActions.test.js index 9c961f45..d2d419e9 100644 --- a/src/__tests__/actions/ServerActions.test.js +++ b/src/__tests__/actions/ServerActions.test.js @@ -5,11 +5,40 @@ import { getLogList, getSplits, postSplit, - postTraining + postTraining, + getLimeValues, + getShapValues, + getIceValues, + getSkaterValues, + getLimeTemporalStabilityValues, + getPredictionTemporalStabilityValues, + getDecodingDf, + getEncodedUniqueValues, + getRetrainValues, + getCfFeedbackValues, + getModels, + postPrediction, + postReplay, + getTraceList } from '../../actions/ServerActions'; -import {JOB_DELETED, jobsFailed, jobsRetrieved, trainingFailed, trainingSucceeded} from '../../actions/JobActions'; +import {JOB_DELETED, jobsFailed, jobsRetrieved, trainingFailed, + trainingSucceeded, decodingtRetrieved, decodingFailed, + encodedUniqueValuesRetrieved, encodedUniqueValuesFailed} from '../../actions/JobActions'; import {logInfoFailed, logInfoRetrieved, logListFailed, logListsRetrieved} from '../../actions/LogActions'; import {splitFailed, splitsFailed, splitsRetrieved, splitSucceeded} from '../../actions/SplitActions'; +import {limeValueListFailed, limeValueListRetrieved, shapValueListRetrieved, + shapValueListFailed, iceValueListRetrieved, iceValueListFailed, + skaterValueListRetrieved, skaterValueListFailed, retrainValueListRetrieved, + retrainValueListFailed, cffeedbackValueListRetrieved, + cffeedbackValueListFailed} from '../../actions/ExplanationActions'; +import {limeTemporalStabilityResult, encodedUniqueDFResultList, temporalStabilityResult, + limeList, shapResult, iceResultList, skaterResult, + retrainResult, cfFeedbackResult, decodedDFResultList, traceList} from '../../../stories/Explanation'; +import {temporalLimePredictionListRetrieved, temporalPredictionListRetrieved, + temporalPredictionListFailed, temporalLimePredictionListFailed} from '../../actions/PredictionAction'; +import {modelsRetrieved, modelsFailed} from '../../actions/ModelActions'; +import {predictionSucceeded, predictionFailed, replaySucceeded, replayFailed} from '../../actions/RuntimeActions'; +import {traceListRetrieved, traceListFailed} from '../../actions/TraceActions'; // https://www.jstwister.com/post/unit-testing-beginners-guide-mock-http-and-files/ @@ -20,6 +49,8 @@ const standardError = (mockXHR) => { }; const logs = [{log: 'name'}]; +const job = {id: 1}; + const splits = [{type: 'single', config: 'like me'}]; const createMockXHR = (responseJSON, status) => { const mockXHR = { @@ -135,6 +166,46 @@ describe('ServerActions', function () { }); }); + describe('postPrediction ', () => { + it('dispatches predictionSumitted on success', () => { + mockXHR.responseText = JSON.stringify(job); + + postPrediction({})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]).toEqual(predictionSucceeded(job)); + }); + + it('dispatches predictionSumitted on error', () => { + standardError(mockXHR); + + postPrediction({})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]).toEqual(predictionFailed(error.error)); + }); + }); + + describe('postReplay', () => { + it('dispatches Replay on success', () => { + mockXHR.responseText = JSON.stringify(job); + + postReplay({})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]).toEqual(replaySucceeded(job)); + }); + + it('dispatches predictionSumitted on error', () => { + standardError(mockXHR); + + postReplay({})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]).toEqual(replayFailed(error.error)); + }); + }); + describe('getLogList', () => { describe('on success', () => { const logList = [ @@ -208,4 +279,256 @@ describe('ServerActions', function () { expect(dispatch.mock.calls[0][0]).toEqual(splitFailed(error.error)); }); }); + + describe('getModels', () => { + it('dispatches Models on success', () => { + mockXHR.responseText = JSON.stringify([]); + + getModels({})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(modelsRetrieved([])); + }); + it('dispatches Models on error', () => { + standardError(mockXHR); + + getModels({})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(modelsFailed(error.error)); + }); + }); + + describe('getTraceList', () => { + it('dispatches traceList on success', () => { + mockXHR.responseText = JSON.stringify(traceList); + + getTraceList({jobId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(traceListRetrieved(traceList)); + }); + it('dispatches traceList on error', () => { + standardError(mockXHR); + + getTraceList({jobId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(traceListFailed(error.error)); + }); + }); + + describe('getLime', () => { + it('dispatches limeRetrieved on success', () => { + mockXHR.responseText = JSON.stringify(limeList); + + getLimeValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(limeValueListRetrieved(limeList)); + }); + it('dispatches limeRetreived on error', () => { + standardError(mockXHR); + + getLimeValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(limeValueListFailed(error.error)); + }); + }); + + describe('getShap', () => { + it('dispatches shapRetrieved on success', () => { + mockXHR.responseText = JSON.stringify(shapResult); + + getShapValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(shapValueListRetrieved(shapResult)); + }); + it('dispatches shapRetreived on error', () => { + standardError(mockXHR); + + getShapValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(shapValueListFailed(error.error)); + }); + }); + + describe('getIce', () => { + it('dispatches iceRetrieved on success', () => { + mockXHR.responseText = JSON.stringify(iceResultList); + + getIceValues({jobId: 1, attribute: 'Age'})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(iceValueListRetrieved(iceResultList)); + }); + it('dispatches iceRetreived on error', () => { + standardError(mockXHR); + + getIceValues({jobId: 1, attribute: 'Age'})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(iceValueListFailed(error.error)); + }); + }); + + describe('getSkater', () => { + it('dispatches skaterRetrieved on success', () => { + mockXHR.responseText = JSON.stringify(skaterResult); + + getSkaterValues({jobId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(skaterValueListRetrieved(skaterResult)); + }); + it('dispatches skaterRetrieved on error', () => { + standardError(mockXHR); + + getSkaterValues({jobId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(skaterValueListFailed(error.error)); + }); + }); + + describe('getLimeTemporalStabilityValues', () => { + it('dispatches LimeTemporalStabilityValues on success', () => { + mockXHR.responseText = JSON.stringify(limeTemporalStabilityResult); + + getLimeTemporalStabilityValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(temporalLimePredictionListRetrieved(limeTemporalStabilityResult)); + }); + it('dispatches LimeTemporalStabilityValues on error', () => { + standardError(mockXHR); + + getLimeTemporalStabilityValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(temporalLimePredictionListFailed(error.error)); + }); + }); + + describe('getPredictionTemporalStabilityValues', () => { + it('dispatches LimeTemporalStabilityValues on success', () => { + mockXHR.responseText = JSON.stringify(temporalStabilityResult); + + getPredictionTemporalStabilityValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(temporalPredictionListRetrieved(temporalStabilityResult)); + }); + it('dispatches getPredictionTemporalStabilityValues on error', () => { + standardError(mockXHR); + + getPredictionTemporalStabilityValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(temporalPredictionListFailed(error.error)); + }); + }); + + describe('getDecodedDf', () => { + it('dispatches decodedDf on success', () => { + mockXHR.responseText = JSON.stringify(decodedDFResultList); + + getDecodingDf({jobId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(decodingtRetrieved(decodedDFResultList)); + }); + it('dispatches decodedDf on error', () => { + standardError(mockXHR); + + getDecodingDf({jobId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(decodingFailed(error.error)); + }); + }); + + describe('getEncodedUniqueValues', () => { + it('dispatches EncodedUniqueValues on success', () => { + mockXHR.responseText = JSON.stringify(encodedUniqueDFResultList); + + getEncodedUniqueValues({jobId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(encodedUniqueValuesRetrieved(encodedUniqueDFResultList)); + }); + it('dispatches EncodedUniqueValues on error', () => { + standardError(mockXHR); + + getEncodedUniqueValues({jobId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(encodedUniqueValuesFailed(error.error)); + }); + }); + + describe('getRetrainValues', () => { + it('dispatches RetrainValues on success', () => { + mockXHR.responseText = JSON.stringify(retrainResult); + + getRetrainValues({jobId: 1, featureNames: 'Age', featureValues: 23})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(retrainValueListRetrieved(retrainResult)); + }); + it('dispatches RetrainValues on error', () => { + standardError(mockXHR); + + getRetrainValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(retrainValueListFailed(error.error)); + }); + }); + + describe('getCfFeedbackValues', () => { + it('dispatches CfFeedbackValues on success', () => { + mockXHR.responseText = JSON.stringify(cfFeedbackResult); + + getCfFeedbackValues({jobId: 1, attribute: 'Age'})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(cffeedbackValueListRetrieved(cfFeedbackResult)); + }); + it('dispatches CfFeedbackValues on error', () => { + standardError(mockXHR); + + getCfFeedbackValues({jobId: 1, traceId: 1})(dispatch); + mockXHR.onreadystatechange(); + + expect(dispatch.mock.calls[0][0]) + .toEqual(cffeedbackValueListFailed(error.error)); + }); + }); }); diff --git a/src/__tests__/components/advanced/IncrementalTable.test.js b/src/__tests__/components/advanced/IncrementalTable.test.js new file mode 100644 index 00000000..25179467 --- /dev/null +++ b/src/__tests__/components/advanced/IncrementalTable.test.js @@ -0,0 +1,21 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import IncrementalTable from '../../../components/advanced/IncrementalTable'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import {jobs} from '../../../../stories/JobStatusTable'; + + +describe('IncrementalTable Result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(4); + expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(3); + expect(element.find(DataTable).at(0).find(TableHeader) + .find(TableColumn).length).toBe(9); + expect(element.find(TablePagination).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/explanation/CfFeedback.test.js b/src/__tests__/components/explanation/CfFeedback.test.js new file mode 100644 index 00000000..257696db --- /dev/null +++ b/src/__tests__/components/explanation/CfFeedback.test.js @@ -0,0 +1,47 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import CircularProgress from 'react-md/lib/Progress/CircularProgress'; +import {retrainResult, cfFeedbackResult} from '../../../../stories/Explanation'; +import CfFeedback from '../../../components/explanation/CfFeedback'; +import RetrainResultTable from '../../../components/explanation/RetrainResultTable'; +import {TextField} from 'react-md'; + + +describe('CfFeedback result', () => { + it('All data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(1); + expect(element.find(TextField).at(0).props().min).toBe(0); + expect(element.find(RetrainResultTable).length).toBe(1); + expect(element.find(CircularProgress).length).toBe(0); + }); + + // it('None of the data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(1); + expect(element.find(TextField).at(0).props().min).toBe(0); + expect(element.find(RetrainResultTable).length).toBe(1); + expect(element.find(CircularProgress).length).toBe(3); +}); diff --git a/src/__tests__/components/explanation/CfFeedbackResult.test.js b/src/__tests__/components/explanation/CfFeedbackResult.test.js new file mode 100644 index 00000000..e77a6c5f --- /dev/null +++ b/src/__tests__/components/explanation/CfFeedbackResult.test.js @@ -0,0 +1,21 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import CfFeedbackResultTable from '../../../components/explanation/CfFeedbackResultTable'; +import {cfFeedbackResult} from '../../../../stories/Explanation'; +import {parseCfFeedbackResult} from '../../../util/dataReducers'; + +describe('Cf feedback result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(5); + expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(4); + expect(element.find(DataTable).at(0).find(TableHeader) + .find(TableColumn).length).toBe(2); + expect(element.find(TablePagination).length).toBe(0); + }); +}); diff --git a/src/__tests__/components/explanation/RetrainTable.test.js b/src/__tests__/components/explanation/RetrainTable.test.js new file mode 100644 index 00000000..ff91148b --- /dev/null +++ b/src/__tests__/components/explanation/RetrainTable.test.js @@ -0,0 +1,21 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import {retrainResult} from '../../../../stories/Explanation'; +import RetrainResultTable from '../../../components/explanation/RetrainResultTable'; + +describe('Retrain result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(6); + expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(5); + expect(element.find(DataTable).at(0).find(TableHeader) + .find(TableColumn).length).toBe(3); + expect(element.find(TablePagination).length).toBe(0); + }); +}); diff --git a/src/__tests__/components/prediction/LogSelector.test.js b/src/__tests__/components/prediction/LogSelector.test.js new file mode 100644 index 00000000..4357df69 --- /dev/null +++ b/src/__tests__/components/prediction/LogSelector.test.js @@ -0,0 +1,22 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import LogSelector from '../../../components/prediction/LogSelector'; +import {SelectField} from 'react-md'; +import FetchState from '../../../components/FetchState'; + +let labels = ['label1', 'label2']; +describe('Log Selector', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(SelectField).length).toBe(1); + expect(element.find(FetchState).length).toBe(1); + expect(element.find(SelectField).at(0).props().menuItems).toBe(labels); + }); +}); diff --git a/src/__tests__/components/prediction/ModelSelector.test.js b/src/__tests__/components/prediction/ModelSelector.test.js new file mode 100644 index 00000000..dd995250 --- /dev/null +++ b/src/__tests__/components/prediction/ModelSelector.test.js @@ -0,0 +1,21 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ModelSelector from '../../../components/prediction/ModelSelector'; +import {Button} from 'react-md'; +import {jobs} from '../../../../stories/JobStatusTable'; +import IncrementalTable from '../../../components/advanced/IncrementalTable'; + + +describe('Model Selector', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(IncrementalTable).length).toBe(1); + expect(element.find(Button).length).toBe(2); + }); +}); diff --git a/src/__tests__/components/prediction/ResultTable.test.js b/src/__tests__/components/prediction/ResultTable.test.js new file mode 100644 index 00000000..90679695 --- /dev/null +++ b/src/__tests__/components/prediction/ResultTable.test.js @@ -0,0 +1,19 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ResultTable from '../../../components/prediction/ResultTable'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; + +describe('Result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(0); + expect(element.find(DataTable).at(0).find(TableHeader) + .find(TableColumn).length).toBe(9); + expect(element.find(TablePagination).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/runtime/InterResultTable.test.js b/src/__tests__/components/runtime/InterResultTable.test.js new file mode 100644 index 00000000..aff1faea --- /dev/null +++ b/src/__tests__/components/runtime/InterResultTable.test.js @@ -0,0 +1,19 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import InterResultTable from '../../../components/runtime/InterResultTable'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; + +describe('Inter Result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(0); + expect(element.find(DataTable).at(0).find(TableHeader) + .find(TableColumn).length).toBe(5); + expect(element.find(TablePagination).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/runtime/ModelSelector.test.js b/src/__tests__/components/runtime/ModelSelector.test.js new file mode 100644 index 00000000..09f83687 --- /dev/null +++ b/src/__tests__/components/runtime/ModelSelector.test.js @@ -0,0 +1,32 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ModelSelector from '../../../components/runtime/ModelSelector'; +import {SelectField, Button} from 'react-md'; + +let regressionList = ['reg1', 'reg2']; +let classificationList = ['clas1', 'clas2']; +let timeSeriesList = ['timeSeries1', 'timeSeries2']; + +describe('Model Selector', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(SelectField).length).toBe(3); + expect(element.find(Button).length).toBe(2); + expect(element.find(SelectField).at(0).props().menuItems.length).toBe(2); + expect(element.find(SelectField).at(1).props().menuItems.length).toBe(2); + expect(element.find(SelectField).at(2).props().menuItems.length).toBe(2); + expect(element.find(SelectField).at(0).props().menuItems).toBe(regressionList); + expect(element.find(SelectField).at(1).props().menuItems).toBe(classificationList); + expect(element.find(SelectField).at(2).props().menuItems).toBe(timeSeriesList); + }); +}); diff --git a/src/__tests__/components/runtime/Runtime.test.js b/src/__tests__/components/runtime/Runtime.test.js new file mode 100644 index 00000000..fa818bf3 --- /dev/null +++ b/src/__tests__/components/runtime/Runtime.test.js @@ -0,0 +1,20 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import RuntimeTable from '../../../components/runtime/RuntimeTable'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import {jobs} from '../../../../stories/JobStatusTable'; + +describe('RuntimeTable Result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DataTable).length).toBe(1); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(4); + expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(3); + expect(element.find(DataTable).at(0).find(TableHeader) + .find(TableColumn).length).toBe(5); + expect(element.find(TablePagination).length).toBe(1); + }); +}); diff --git a/src/__tests__/reducers/Explanation.test.js b/src/__tests__/reducers/Explanation.test.js index b5a2867f..5e7504dc 100644 --- a/src/__tests__/reducers/Explanation.test.js +++ b/src/__tests__/reducers/Explanation.test.js @@ -4,7 +4,8 @@ import {limeValueListRequested, limeValueListRetrieved, limeValueListFailed, iceValueListFailed, iceValueListRequested, iceValueListRetrieved, skaterValueListFailed, skaterValueListRequested, skaterValueListRetrieved, cffeedbackValueListFailed, cffeedbackValueListRequested, cffeedbackValueListRetrieved, - retrainValueListFailed, retrainValueListRequested, retrainValueListRetrieved} from '../../actions/ExplanationActions'; + retrainValueListFailed, retrainValueListRequested, + retrainValueListRetrieved} from '../../actions/ExplanationActions'; import {limeList, shapResult, iceResultList, skaterResult, retrainResult, cfFeedbackResult} from '../../../stories/Explanation'; diff --git a/src/__tests__/reducers/Prediction.test.js b/src/__tests__/reducers/Prediction.test.js index 51b19dee..4e9ee1a3 100644 --- a/src/__tests__/reducers/Prediction.test.js +++ b/src/__tests__/reducers/Prediction.test.js @@ -1,6 +1,7 @@ import prediction from '../../reducers/Predictions'; import {temporalLimePredictionListFailed, temporalLimePredictionListRequested, temporalLimePredictionListRetrieved, - temporalPredictionListFailed, temporalPredictionListRequested, temporalPredictionListRetrieved} from '../../actions/PredictionAction'; + temporalPredictionListFailed, temporalPredictionListRequested, + temporalPredictionListRetrieved} from '../../actions/PredictionAction'; import {limeTemporalStabilityResult, temporalStabilityResult} from '../../../stories/Explanation'; diff --git a/src/__tests__/reducers/Traces.test.js b/src/__tests__/reducers/Traces.test.js index 3165dc2b..6db2e588 100644 --- a/src/__tests__/reducers/Traces.test.js +++ b/src/__tests__/reducers/Traces.test.js @@ -3,7 +3,8 @@ */ import traces from '../../reducers/Traces'; -import {traceListFailed, traceListRequested, traceListRetrieved, TRACE_UPDATED, TRACE_COMPLETED} from '../../actions/TraceActions'; +import {traceListFailed, traceListRequested, traceListRetrieved, + TRACE_UPDATED, TRACE_COMPLETED} from '../../actions/TraceActions'; const traceList = [{ id: 5, diff --git a/src/actions/ServerActions.js b/src/actions/ServerActions.js index 4ad4bca0..5a5ec93b 100644 --- a/src/actions/ServerActions.js +++ b/src/actions/ServerActions.js @@ -1,7 +1,8 @@ import {SERVER_URL} from '../constants'; import jsonAjax from '../JSONAjaxRequest'; import {JOB_DELETED, jobsFailed, jobsRetrieved, trainingFailed, - trainingSucceeded, decodingtRetrieved, decodingFailed, encodedUniqueValuesRetrieved, encodedUniqueValuesFailed} from './JobActions'; + trainingSucceeded, decodingtRetrieved, decodingFailed, + encodedUniqueValuesRetrieved, encodedUniqueValuesFailed} from './JobActions'; import {logInfoFailed, logInfoRetrieved, logListFailed, logListsRetrieved} from './LogActions'; import {traceListFailed, traceListRetrieved} from './TraceActions'; import {limeValueListFailed, limeValueListRetrieved} from './LimeActions'; @@ -11,7 +12,9 @@ import {predictionFailed, predictionSucceeded, replayFailed, replaySucceeded} fr import {temporalLimePredictionListRetrieved, temporalLimePredictionListFailed, temporalPredictionListRetrieved, temporalPredictionListFailed} from './PredictionAction'; import {shapValueListRetrieved, shapValueListFailed, skaterValueListRetrieved, - skaterValueListFailed, iceValueListFailed, iceValueListRetrieved, cffeedbackValueListRetrieved, cffeedbackValueListFailed, retrainValueListRetrieved, retrainValueListFailed} from './ExplanationActions'; + skaterValueListFailed, iceValueListFailed, iceValueListRetrieved, + cffeedbackValueListRetrieved, cffeedbackValueListFailed, retrainValueListRetrieved, + retrainValueListFailed} from './ExplanationActions'; export const getJobs = () => (dispatch) => { jsonAjax( diff --git a/src/components/explanation/CfFeedback.js b/src/components/explanation/CfFeedback.js index 400a5bb3..ae36ff69 100644 --- a/src/components/explanation/CfFeedback.js +++ b/src/components/explanation/CfFeedback.js @@ -166,15 +166,15 @@ class CfFeedback extends PureComponent { let i = 0; let featureNames = []; let featureValues = []; - // for (i = 0; i : null}
    -
    +
    {this.evaluateFeatureButton()}
    diff --git a/src/middlewares/ServerMiddleware.js b/src/middlewares/ServerMiddleware.js index 36c7344a..de139ddc 100644 --- a/src/middlewares/ServerMiddleware.js +++ b/src/middlewares/ServerMiddleware.js @@ -21,7 +21,8 @@ import { getRetrainValues, getEncodedUniqueValues } from '../actions/ServerActions'; -import {JOB_DELETE_REQUESTED, JOBS_REQUESTED, TRAINING_SUBMITTED, DECODING_REQUESTED, ENCODED_UNIQUE_VALUES_REQUESTED} from '../actions/JobActions'; +import {JOB_DELETE_REQUESTED, JOBS_REQUESTED, TRAINING_SUBMITTED, + DECODING_REQUESTED, ENCODED_UNIQUE_VALUES_REQUESTED} from '../actions/JobActions'; import {TRACE_LIST_REQUESTED} from '../actions/TraceActions'; import {LOG_INFO_REQUESTED, LOG_LIST_REQUESTED} from '../actions/LogActions'; import {LIME_VALUE_LIST_REQUESTED, SHAP_VALUE_LIST_REQUESTED, diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index 279796b4..316cbb71 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -117,10 +117,10 @@ class Explanation extends Component { this.props.onRequestPredictionTemporalList(id, this.props.selectedTrace); this.props.onRequestShapValues(id, this.props.selectedTrace); } - // this.props.onRequestSkaterValues(id); - // this.props.onRequestDecoding(id); + this.props.onRequestSkaterValues(id); + this.props.onRequestDecoding(id); this.props.onRequestEncodeUniqueValuesDF(id); - // this.props.onRequestIceValues(id, this.state.selectedAttribute); + this.props.onRequestIceValues(id, this.state.selectedAttribute); } componentDidMount() { @@ -173,9 +173,6 @@ class Explanation extends Component { jobId={this.props.jobId} />
    - {/*
    - -
    */}
    Date: Sun, 19 Apr 2020 14:06:13 +0300 Subject: [PATCH 21/29] increase test coverage --- .codecov.yml | 4 + package-lock.json | 678 +++++++++++++++++- package.json | 4 + src/__tests__/actions/ServerActions.test.js | 2 +- src/__tests__/components/WalkTrough.test.js | 4 + .../components/advanced/Checkbox.test.js | 15 + .../components/advanced/Incremental.test.js | 17 + .../advanced/Regression/RegressionNN.test.js | 19 + .../ClassificationAdaptiveTree.test.js | 19 + .../ClassificationHoeffdingTree.test.js | 19 + .../classification/ClassificationNN.test.js | 18 + .../ClassificationNaiveBayes.test.js | 18 + .../ClassificationPerceptron.test.js | 19 + .../ClassificationSGDClassifier.test.js | 19 + .../components/explanation/CfFeedback.test.js | 48 +- ...test.js => CfFeedbackResulttTable.test.js} | 19 +- .../components/static/HelpDialog.test.js | 31 + .../TimeSeriesPredictionMethodsCard.test.js | 41 ++ src/__tests__/util/labelCompare.test.js | 24 +- src/actions/ServerActions.js | 10 +- src/components/explanation/CfFeedback.js | 218 ++++-- .../explanation/CfFeedbackResultTable.js | 51 -- .../explanation/CfFeedbackResulttTable.js | 114 +++ .../static/TimeSeriesPredictionMethodsCard.js | 2 + src/reducers/Explanation.js | 4 +- src/util/dataReducers.js | 194 ++++- src/views/Explanation/Explanation.js | 33 +- src/views/Validation/Validation.js | 10 +- stories/Explanation.js | 10 + 29 files changed, 1487 insertions(+), 177 deletions(-) create mode 100644 src/__tests__/components/advanced/Checkbox.test.js create mode 100644 src/__tests__/components/advanced/Incremental.test.js create mode 100644 src/__tests__/components/advanced/Regression/RegressionNN.test.js create mode 100644 src/__tests__/components/advanced/classification/ClassificationAdaptiveTree.test.js create mode 100644 src/__tests__/components/advanced/classification/ClassificationHoeffdingTree.test.js create mode 100644 src/__tests__/components/advanced/classification/ClassificationNN.test.js create mode 100644 src/__tests__/components/advanced/classification/ClassificationNaiveBayes.test.js create mode 100644 src/__tests__/components/advanced/classification/ClassificationPerceptron.test.js create mode 100644 src/__tests__/components/advanced/classification/ClassificationSGDClassifier.test.js rename src/__tests__/components/explanation/{CfFeedbackResult.test.js => CfFeedbackResulttTable.test.js} (50%) create mode 100644 src/__tests__/components/static/HelpDialog.test.js create mode 100644 src/__tests__/components/static/TimeSeriesPredictionMethodsCard.test.js delete mode 100644 src/components/explanation/CfFeedbackResultTable.js create mode 100644 src/components/explanation/CfFeedbackResulttTable.js diff --git a/.codecov.yml b/.codecov.yml index 8d7a6c11..4e00dee4 100644 --- a/.codecov.yml +++ b/.codecov.yml @@ -9,3 +9,7 @@ ignore: - "src/views/Labelling.js" - "src/components/upload/ServerUpload.jsx" - "src/components/upload/UploadDouble.jsx" + - "src/components/advanced/Checkbox.js + - 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"uncontrollable": "^7.0.0", + "warning": "^4.0.3" + }, + "dependencies": { + "@babel/runtime": { + "version": "7.9.2", + "resolved": "https://registry.npmjs.org/@babel/runtime/-/runtime-7.9.2.tgz", + "integrity": "sha512-NE2DtOdufG7R5vnfQUTehdTfNycfUANEtCa9PssN9O/xmTzP4E08UI797ixaei6hBEVL9BI/PsdJS5x7mWoB9Q==", + "requires": { + "regenerator-runtime": "^0.13.4" + } + }, + "dom-helpers": { + "version": "5.1.4", + "resolved": "https://registry.npmjs.org/dom-helpers/-/dom-helpers-5.1.4.tgz", + "integrity": "sha512-TjMyeVUvNEnOnhzs6uAn9Ya47GmMo3qq7m+Lr/3ON0Rs5kHvb8I+SQYjLUSYn7qhEm0QjW0yrBkvz9yOrwwz1A==", + "requires": { + "@babel/runtime": "^7.8.7", + "csstype": "^2.6.7" + } + }, + "regenerator-runtime": { + "version": "0.13.5", + "resolved": "https://registry.npmjs.org/regenerator-runtime/-/regenerator-runtime-0.13.5.tgz", + "integrity": "sha512-ZS5w8CpKFinUzOwW3c83oPeVXoNsrLsaCoLtJvAClH135j/R77RuymhiSErhm2lKcwSCIpmvIWSbDkIfAqKQlA==" + }, + "warning": { + "version": "4.0.3", + "resolved": "https://registry.npmjs.org/warning/-/warning-4.0.3.tgz", + "integrity": "sha512-rpJyN222KWIvHJ/F53XSZv0Zl/accqHR8et1kpaMTD/fLCRxtV8iX8czMzY7sVZupTI3zcUTg8eycS2kNF9l6w==", + "requires": { + "loose-envify": "^1.0.0" + } + } + } + }, "react-prop-types": { "version": "0.4.0", "resolved": "https://registry.npmjs.org/react-prop-types/-/react-prop-types-0.4.0.tgz", @@ -17276,7 +17909,6 @@ "version": "0.2.2", "resolved": "https://registry.npmjs.org/simple-swizzle/-/simple-swizzle-0.2.2.tgz", "integrity": "sha1-pNprY1/8zMoz9w0Xy5JZLeleVXo=", - "dev": true, "requires": { "is-arrayish": "^0.3.1" }, @@ -17284,8 +17916,7 @@ "is-arrayish": { "version": "0.3.2", "resolved": "https://registry.npmjs.org/is-arrayish/-/is-arrayish-0.3.2.tgz", - "integrity": "sha512-eVRqCvVlZbuw3GrM63ovNSNAeA1K16kaR/LRY/92w0zxQ5/1YzwblUX652i4Xs9RwAGjW9d9y6X88t8OaAJfWQ==", - "dev": true + "integrity": "sha512-eVRqCvVlZbuw3GrM63ovNSNAeA1K16kaR/LRY/92w0zxQ5/1YzwblUX652i4Xs9RwAGjW9d9y6X88t8OaAJfWQ==" } } }, @@ -18486,6 +19117,11 @@ "integrity": "sha1-QFQRqOfmM5/mTbmiNN4R3DHgK9Q=", "dev": true }, + "tiny-warning": { + "version": "1.0.3", + "resolved": "https://registry.npmjs.org/tiny-warning/-/tiny-warning-1.0.3.tgz", + "integrity": "sha512-lBN9zLN/oAf68o3zNXYrdCt1kP8WsiGW8Oo2ka41b2IM5JL/S1CTyX1rW0mb/zSuJun0ZUrDxx4sqvYS2FWzPA==" + }, "tmp": { "version": "0.0.33", "resolved": "https://registry.npmjs.org/tmp/-/tmp-0.0.33.tgz", @@ -18691,6 +19327,32 @@ } } }, + "uncontrollable": { + "version": "7.1.1", + "resolved": "https://registry.npmjs.org/uncontrollable/-/uncontrollable-7.1.1.tgz", + "integrity": "sha512-EcPYhot3uWTS3w00R32R2+vS8Vr53tttrvMj/yA1uYRhf8hbTG2GyugGqWDY0qIskxn0uTTojVd6wPYW9ZEf8Q==", + "requires": { + "@babel/runtime": "^7.6.3", + "@types/react": "^16.9.11", + "invariant": "^2.2.4", + "react-lifecycles-compat": "^3.0.4" + }, + "dependencies": { + "@babel/runtime": { + "version": "7.9.2", + "resolved": "https://registry.npmjs.org/@babel/runtime/-/runtime-7.9.2.tgz", + "integrity": "sha512-NE2DtOdufG7R5vnfQUTehdTfNycfUANEtCa9PssN9O/xmTzP4E08UI797ixaei6hBEVL9BI/PsdJS5x7mWoB9Q==", + "requires": { + "regenerator-runtime": "^0.13.4" + } + }, + "regenerator-runtime": { + "version": "0.13.5", + "resolved": "https://registry.npmjs.org/regenerator-runtime/-/regenerator-runtime-0.13.5.tgz", + "integrity": "sha512-ZS5w8CpKFinUzOwW3c83oPeVXoNsrLsaCoLtJvAClH135j/R77RuymhiSErhm2lKcwSCIpmvIWSbDkIfAqKQlA==" + } + } + }, "unicode-canonical-property-names-ecmascript": { "version": "1.0.4", "resolved": "https://registry.npmjs.org/unicode-canonical-property-names-ecmascript/-/unicode-canonical-property-names-ecmascript-1.0.4.tgz", diff --git a/package.json b/package.json index 6b589cf4..e6f149e5 100644 --- a/package.json +++ b/package.json @@ -18,7 +18,9 @@ "react-scripts": "^2.1.8" }, "dependencies": { + "@material-ui/core": "^4.9.10", "apexcharts": "^3.10.1", + "bootstrap": "^4.4.1", "dompurify": "^2.0.8", "graphviz-react": "^1.0.4", "loader-runner": "^3.0.0", @@ -27,6 +29,7 @@ "react": "16.3.2", "react-apexcharts": "^1.3.3", "react-aspect-ratio": "^1.0.42", + "react-bootstrap": "^1.0.0", "react-d3-tree": "^1.16.1", "react-dom": "16.3.3", "react-full-screen": "^0.2.4", @@ -37,6 +40,7 @@ "react-html-parser": "^1.0.3", "react-json-tree": "^0.11.0", "react-md": "^1.12.1", + "react-native-elements": "^1.2.7", "react-redux": "^5.0.3", "react-router": "3.2.0", "react-router-dom": "^4.1.1", diff --git a/src/__tests__/actions/ServerActions.test.js b/src/__tests__/actions/ServerActions.test.js index d2d419e9..19369204 100644 --- a/src/__tests__/actions/ServerActions.test.js +++ b/src/__tests__/actions/ServerActions.test.js @@ -494,7 +494,7 @@ describe('ServerActions', function () { it('dispatches RetrainValues on success', () => { mockXHR.responseText = JSON.stringify(retrainResult); - getRetrainValues({jobId: 1, featureNames: 'Age', featureValues: 23})(dispatch); + getRetrainValues({jobId: 1, data: []})(dispatch); mockXHR.onreadystatechange(); expect(dispatch.mock.calls[0][0]) diff --git a/src/__tests__/components/WalkTrough.test.js b/src/__tests__/components/WalkTrough.test.js index 722d4127..fd418cf5 100644 --- a/src/__tests__/components/WalkTrough.test.js +++ b/src/__tests__/components/WalkTrough.test.js @@ -1,9 +1,13 @@ import React from 'react'; import {shallow} from 'enzyme'; import WalkThrough from '../../components/WalkThrough'; +import {List} from 'react-md'; +import GuideItem from '../../components/static/GuideItem'; it('renders', () => { const element = shallow(); expect(element).toBeDefined(); + expect(element.find(List).length).toBe(1); + expect(element.find(GuideItem).length).toBeGreaterThanOrEqual(7); }); diff --git a/src/__tests__/components/advanced/Checkbox.test.js b/src/__tests__/components/advanced/Checkbox.test.js new file mode 100644 index 00000000..4b8ef151 --- /dev/null +++ b/src/__tests__/components/advanced/Checkbox.test.js @@ -0,0 +1,15 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import Checkbox + from '../../../components/advanced/Checkbox'; +const onChange = jest.fn(); + +describe('IncrementalTable Result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + }); +}); + diff --git a/src/__tests__/components/advanced/Incremental.test.js b/src/__tests__/components/advanced/Incremental.test.js new file mode 100644 index 00000000..d932c0bd --- /dev/null +++ b/src/__tests__/components/advanced/Incremental.test.js @@ -0,0 +1,17 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import Incremental from '../../../components/advanced/Incremental'; +import {jobs} from '../../../../stories/JobStatusTable'; + + +describe('IncrementalTable Result Table', () => { + it('renders', () => { + const element = shallow(); + expect(element).toBeDefined(); + }); +}); diff --git a/src/__tests__/components/advanced/Regression/RegressionNN.test.js b/src/__tests__/components/advanced/Regression/RegressionNN.test.js new file mode 100644 index 00000000..51f1543f --- /dev/null +++ b/src/__tests__/components/advanced/Regression/RegressionNN.test.js @@ -0,0 +1,19 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import RegressionNN + from '../../../../components/advanced/regression/RegressionNN'; +import {TextField, SelectField} from 'react-md'; + +const onChange = jest.fn(); + +describe('RegressionNN result', () => { + it('Data loaded', () => { + const element = shallow(); + + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(4); + expect(element.find(SelectField).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/advanced/classification/ClassificationAdaptiveTree.test.js b/src/__tests__/components/advanced/classification/ClassificationAdaptiveTree.test.js new file mode 100644 index 00000000..61d9d309 --- /dev/null +++ b/src/__tests__/components/advanced/classification/ClassificationAdaptiveTree.test.js @@ -0,0 +1,19 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ClassificationAdaptiveTree + from '../../../../components/advanced/classification/ClassificationAdaptiveTree'; +import {TextField, SelectField, Checkbox} from 'react-md'; + +const onChange = jest.fn(); + +describe('Classification Adaptive tree result', () => { + it('Data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(4); + expect(element.find(SelectField).length).toBe(2); + expect(element.find(Checkbox).length).toBe(4); + }); +}); diff --git a/src/__tests__/components/advanced/classification/ClassificationHoeffdingTree.test.js b/src/__tests__/components/advanced/classification/ClassificationHoeffdingTree.test.js new file mode 100644 index 00000000..28be53a8 --- /dev/null +++ b/src/__tests__/components/advanced/classification/ClassificationHoeffdingTree.test.js @@ -0,0 +1,19 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ClassificationHoeffdingTree + from '../../../../components/advanced/classification/ClassificationHoeffdingTree'; +import {TextField, SelectField, Checkbox} from 'react-md'; + +const onChange = jest.fn(); + +describe('Classification Hoeffding tree result', () => { + it('Data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(4); + expect(element.find(SelectField).length).toBe(2); + expect(element.find(Checkbox).length).toBe(4); + }); +}); diff --git a/src/__tests__/components/advanced/classification/ClassificationNN.test.js b/src/__tests__/components/advanced/classification/ClassificationNN.test.js new file mode 100644 index 00000000..4483e696 --- /dev/null +++ b/src/__tests__/components/advanced/classification/ClassificationNN.test.js @@ -0,0 +1,18 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ClassificationNN + from '../../../../components/advanced/classification/ClassificationNN'; +import {TextField, SelectField} from 'react-md'; + +const onChange = jest.fn(); + +describe('Classification Hoeffding tree result', () => { + it('Data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(4); + expect(element.find(SelectField).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/advanced/classification/ClassificationNaiveBayes.test.js b/src/__tests__/components/advanced/classification/ClassificationNaiveBayes.test.js new file mode 100644 index 00000000..7c6e12de --- /dev/null +++ b/src/__tests__/components/advanced/classification/ClassificationNaiveBayes.test.js @@ -0,0 +1,18 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ClassificationNaiveBayes + from '../../../../components/advanced/classification/ClassificationNaiveBayes'; +import {TextField, Checkbox} from 'react-md'; + +const onChange = jest.fn(); + +describe('ClassificationNaiveBayes result', () => { + it('Data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(1); + expect(element.find(Checkbox).length).toBe(1); + }); +}); diff --git a/src/__tests__/components/advanced/classification/ClassificationPerceptron.test.js b/src/__tests__/components/advanced/classification/ClassificationPerceptron.test.js new file mode 100644 index 00000000..bd2a3ba8 --- /dev/null +++ b/src/__tests__/components/advanced/classification/ClassificationPerceptron.test.js @@ -0,0 +1,19 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ClassificationPerceptron + from '../../../../components/advanced/classification/ClassificationPerceptron'; +import {TextField, SelectField, Checkbox} from 'react-md'; + +const onChange = jest.fn(); + +describe('ClassificationPerceptron result', () => { + it('Data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(6); + expect(element.find(SelectField).length).toBe(1); + expect(element.find(Checkbox).length).toBe(3); + }); +}); diff --git a/src/__tests__/components/advanced/classification/ClassificationSGDClassifier.test.js b/src/__tests__/components/advanced/classification/ClassificationSGDClassifier.test.js new file mode 100644 index 00000000..eb635960 --- /dev/null +++ b/src/__tests__/components/advanced/classification/ClassificationSGDClassifier.test.js @@ -0,0 +1,19 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import ClassificationSGDClassifier + from '../../../../components/advanced/classification/ClassificationSGDClassifier'; +import {TextField, SelectField, Checkbox} from 'react-md'; + +const onChange = jest.fn(); + +describe('ClassificationSGDClassifier result', () => { + it('Data loaded', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(TextField).length).toBe(9); + expect(element.find(SelectField).length).toBe(3); + expect(element.find(Checkbox).length).toBe(3); + }); +}); diff --git a/src/__tests__/components/explanation/CfFeedback.test.js b/src/__tests__/components/explanation/CfFeedback.test.js index 257696db..8ccb07f9 100644 --- a/src/__tests__/components/explanation/CfFeedback.test.js +++ b/src/__tests__/components/explanation/CfFeedback.test.js @@ -1,11 +1,15 @@ import React from 'react'; import {shallow} from 'enzyme'; import CircularProgress from 'react-md/lib/Progress/CircularProgress'; -import {retrainResult, cfFeedbackResult} from '../../../../stories/Explanation'; +import {retrainResult, cfFeedbackResult, uniqueEncodedDecodedValues} from '../../../../stories/Explanation'; import CfFeedback from '../../../components/explanation/CfFeedback'; import RetrainResultTable from '../../../components/explanation/RetrainResultTable'; -import {TextField} from 'react-md'; +import {TextField, SelectField} from 'react-md'; +import CfFeedbackResulttTable from '../../../components/explanation/CfFeedbackResulttTable'; +import {getUniqueFeatureValues, getFeatureNames, encodePatternsForDropdown} from '../../../util/dataReducers'; +const onSubmitTopK = jest.fn(); +const onSubmitFeatureNamesAndValues = jest.fn(); describe('CfFeedback result', () => { it('All data loaded', () => { @@ -16,32 +20,46 @@ describe('CfFeedback result', () => { isRetrainValuesLoaded={true} isEncodedUniqueValuesLoaded={true} retrainValue={retrainResult} - featureNames={['Age', 'Prefix']} - featureValues={[{'Age': [1, 2]}, {'Prefix': [1, 2]}]} - onSubmitTopK={new function () {}} - onSubmitFeatureNamesAndValues={new function () {}}/>); + featureNames={getFeatureNames(uniqueEncodedDecodedValues)} + patterns={encodePatternsForDropdown(cfFeedbackResult[1])} + featureValues={getUniqueFeatureValues(uniqueEncodedDecodedValues)} + onSubmitTopK={onSubmitTopK} + onSubmitFeatureNamesAndValues={onSubmitFeatureNamesAndValues}/>); expect(element).toBeDefined(); + element.setState({numberOfDropdownFeatures: 1}); + element.setState({numberOfDropdownPatterns: 1}); + expect(element.find(TextField).length).toBe(1); - expect(element.find(TextField).at(0).props().min).toBe(0); + expect(element.find(CfFeedbackResulttTable).length).toBe(1); expect(element.find(RetrainResultTable).length).toBe(1); + expect(element.find(TextField).at(0).props().min).toBe(0); + expect(element.find(SelectField).length).toBe(3); expect(element.find(CircularProgress).length).toBe(0); }); - // it('None of the data loaded', () => { + it('None of the data loaded', () => { const element = shallow(); + retrainValue={retrainResult} + featureNames={getFeatureNames(uniqueEncodedDecodedValues)} + patterns={encodePatternsForDropdown(cfFeedbackResult[1])} + featureValues={getUniqueFeatureValues(uniqueEncodedDecodedValues)} + onSubmitTopK={onSubmitTopK} + onSubmitFeatureNamesAndValues={onSubmitFeatureNamesAndValues}/>); expect(element).toBeDefined(); + + element.setState({numberOfDropdownFeatures: 1}); + element.setState({numberOfDropdownPatterns: 1}); + expect(element.find(TextField).length).toBe(1); - expect(element.find(TextField).at(0).props().min).toBe(0); + expect(element.find(CfFeedbackResulttTable).length).toBe(1); expect(element.find(RetrainResultTable).length).toBe(1); + expect(element.find(TextField).at(0).props().min).toBe(0); + expect(element.find(SelectField).length).toBe(3); expect(element.find(CircularProgress).length).toBe(3); + }); }); diff --git a/src/__tests__/components/explanation/CfFeedbackResult.test.js b/src/__tests__/components/explanation/CfFeedbackResulttTable.test.js similarity index 50% rename from src/__tests__/components/explanation/CfFeedbackResult.test.js rename to src/__tests__/components/explanation/CfFeedbackResulttTable.test.js index e77a6c5f..073aa947 100644 --- a/src/__tests__/components/explanation/CfFeedbackResult.test.js +++ b/src/__tests__/components/explanation/CfFeedbackResulttTable.test.js @@ -1,21 +1,28 @@ import React from 'react'; import {shallow} from 'enzyme'; import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; -import CfFeedbackResultTable from '../../../components/explanation/CfFeedbackResultTable'; +import CfFeedbackResulttTable from '../../../components/explanation/CfFeedbackResulttTable'; import {cfFeedbackResult} from '../../../../stories/Explanation'; -import {parseCfFeedbackResult} from '../../../util/dataReducers'; +import {SelectField} from 'react-md'; + +const onSelectedMatrixChange = jest.fn(); describe('Cf feedback result Table', () => { it('renders', () => { - const element = shallow(); expect(element).toBeDefined(); expect(element.find(DataTable).length).toBe(1); + expect(element.find(SelectField).length).toBe(1); + expect(element.find(SelectField).at(0).props().defaultValue).toBe('All'); + expect(element.find(DataTable).at(0).find(TableRow).length).toBe(5); expect(element.find(DataTable).at(0).find(TableBody).find(TableRow).length).toBe(4); expect(element.find(DataTable).at(0).find(TableHeader) - .find(TableColumn).length).toBe(2); - expect(element.find(TablePagination).length).toBe(0); + .find(TableColumn).length).toBe(3); + expect(element.find(TablePagination).length).toBe(1); }); }); diff --git a/src/__tests__/components/static/HelpDialog.test.js b/src/__tests__/components/static/HelpDialog.test.js new file mode 100644 index 00000000..045ed4de --- /dev/null +++ b/src/__tests__/components/static/HelpDialog.test.js @@ -0,0 +1,31 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import HelpDialog + from '../../../components/static/HelpDialog'; +import {DialogContainer} from 'react-md'; + +const onChange = jest.fn(); + +describe('HelpDialog result', () => { + it('Visible item', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DialogContainer).length).toBe(1); + expect(element.find(DialogContainer).at(0).props().visible).toBe(true); + }); + + it('Hide item', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(DialogContainer).length).toBe(1); + expect(element.find(DialogContainer).at(0).props().visible).toBe(false); + }); +}); diff --git a/src/__tests__/components/static/TimeSeriesPredictionMethodsCard.test.js b/src/__tests__/components/static/TimeSeriesPredictionMethodsCard.test.js new file mode 100644 index 00000000..c0a7c12f --- /dev/null +++ b/src/__tests__/components/static/TimeSeriesPredictionMethodsCard.test.js @@ -0,0 +1,41 @@ +import React from 'react'; +import {shallow} from 'enzyme'; +import TimeSeriesPredictionMethodsCard + from '../../../components/static/TimeSeriesPredictionMethodsCard'; +import {Card} from 'react-md/lib/Cards/index'; +import {Chart} from 'react-google-charts'; + + +const opts = { + hAxis: { + title: 'Time Series Prediction methods', + minValue: 0, + }, + vAxis: { + title: 'Time in seconds', + }, + chartArea: {width: '60%'}, + isStacked: false, +}; +const columns2 = [ + {type: 'string', label: 'Time Series Prediction method'}, + {type: 'number', label: 'Method time'}, + {type: 'string', role: 'annotation'}, +]; +const dataClass = [ + columns2, + ['Decision tree', 0.06, '0.06'], + ['Random forest', 0.39, '0.39'], + ['KNN', 4.60, '4.60'], +]; +describe('HelpDialog result', () => { + it('Visible item', () => { + const element = shallow(); + expect(element).toBeDefined(); + expect(element.find(Card).length).toBe(1); + expect(element.find(Chart).length).toBe(1); + expect(element.find(Chart).at(0).props().data.toString()).toBe(dataClass.toString()); + expect(element.find(Chart).at(0).props().options.toString()).toBe(opts.toString()); + }); +}); diff --git a/src/__tests__/util/labelCompare.test.js b/src/__tests__/util/labelCompare.test.js index 60d6a00b..cddb2de5 100644 --- a/src/__tests__/util/labelCompare.test.js +++ b/src/__tests__/util/labelCompare.test.js @@ -7,7 +7,8 @@ import { REGRESSION, REMAINING_TIME, THRESHOLD_CUSTOM, - THRESHOLD_MEAN + THRESHOLD_MEAN, + TIME_SERIES_PREDICTION } from '../../reference'; import {labelCompare} from '../../util/labelCompare'; @@ -17,6 +18,7 @@ const atrNum = {type: ATTRIBUTE_NUMBER, attribute_name: 'name'}; const regCompare = labelCompare(REGRESSION); const classCompare = labelCompare(CLASSIFICATION); // can also be labelling +const timeSeriesCompare = labelCompare(TIME_SERIES_PREDICTION); // can also be labelling it('false if wrong type', () => { const result = regCompare(remainingTime, atrNum); @@ -39,6 +41,26 @@ describe('Regression', () => { }); }); +describe('TimeSeries', () => { + describe('Duration', () => { + const durMean = {type: DURATION, threshold_type: THRESHOLD_MEAN}; + const durCustom = {type: DURATION, threshold_type: THRESHOLD_CUSTOM, threshold: 100}; + it('true if both threshold mean', () => { + expect(timeSeriesCompare(durMean, durMean)).toEqual(true); + }); + it('true if threshold custom with same threshold', () => { + expect(timeSeriesCompare(durCustom, durCustom)).toEqual(true); + }); + + it('false if different thresholds types or numbers', () => { + expect(timeSeriesCompare(durMean, durCustom)).toEqual(false); + const result = timeSeriesCompare(durCustom, {type: DURATION, threshold_type: THRESHOLD_CUSTOM, threshold: 2}); + expect(result).toEqual(false); + }); + }); +}); + + describe('Classification', () => { describe('Duration', () => { const durMean = {type: DURATION, threshold_type: THRESHOLD_MEAN}; diff --git a/src/actions/ServerActions.js b/src/actions/ServerActions.js index 5a5ec93b..e2cf6d2d 100644 --- a/src/actions/ServerActions.js +++ b/src/actions/ServerActions.js @@ -209,7 +209,7 @@ export const getIceValues = ({jobId, attribute}) => (dispatch) => { export const getCfFeedbackValues = ({jobId, attribute}) => (dispatch) => { jsonAjax( - SERVER_URL + `/explanation/cffeedback/${jobId}&${attribute}/`, + SERVER_URL + `/explanation/cffeedback/${71}&${attribute}/`, 'GET', null, (resul) => { @@ -219,11 +219,11 @@ export const getCfFeedbackValues = ({jobId, attribute}) => (dispatch) => { ); }; -export const getRetrainValues = ({jobId, featureNames, featureValues}) => (dispatch) => { +export const getRetrainValues = ({jobId, data}) => (dispatch) => { jsonAjax( - SERVER_URL + `/explanation/retrain/${jobId}&${featureNames}&${featureValues}/`, - 'GET', - null, + SERVER_URL + `/explanation/retrain/${71}/`, + 'POST', + data, (resul) => { dispatch(retrainValueListRetrieved(resul)); }, diff --git a/src/components/explanation/CfFeedback.js b/src/components/explanation/CfFeedback.js index ae36ff69..25cfe6f1 100644 --- a/src/components/explanation/CfFeedback.js +++ b/src/components/explanation/CfFeedback.js @@ -3,33 +3,58 @@ import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; import PropTypes from 'prop-types'; import CircularProgress from 'react-md/lib/Progress/CircularProgress'; import {TextField} from 'react-md'; -import CfFeedbackResultTable from './CfFeedbackResultTable'; +import CfFeedbackResulttTable from './CfFeedbackResulttTable'; import SelectField from 'react-md/lib/SelectFields'; import {Row} from 'react-grid-system'; import RetrainResultTable from './RetrainResultTable'; +import {getFeatureNamesAndValueFromSelectedPatterns} from '../../util/dataReducers'; class CfFeedback extends PureComponent { constructor(props) { super(props); - let removedIndex = []; - let numberOfDropdown = 0; + let removedIndexFeatures = []; + let removedIndexPatterns = []; + let numberOfDropdownFeatures = 0; + let numberOfDropdownPatterns = 0; + let shownDropdownsFeatures = 0; + let shownDropdownsPatterns = 0; + let selectedMatrix = 'All'; let featureNames = []; + let patterns = []; this.state = { - numberOfDropdown, - removedIndex, - featureNames + numberOfDropdownFeatures, + numberOfDropdownPatterns, + shownDropdownsFeatures, + shownDropdownsPatterns, + removedIndexFeatures, + removedIndexPatterns, + featureNames, + patterns, + selectedMatrix }; } onChangeFeatureName(value, index, event, data) { let i=0; let arr = this.state.featureNames; - for (i=0; i < this.state.numberOfDropdown; i++) { + for (i=0; i < this.state.numberOfDropdownFeatures; i++) { if (data.id == 'features_'+i) { arr[i] = data.value; } } this.setState({featureNames: arr}); - this.setState({removedIndex: this.state.removedIndex.concat(-2)}); + this.setState({removedIndexFeatures: this.state.removedIndexFeatures.concat(-2)}); + } + + onChangePattern(value, index, event, data) { + let i=0; + let arr = this.state.patterns; + for (i=0; i < this.state.numberOfDropdownPatterns; i++) { + if (data.id == 'patterns_'+i) { + arr[i] = data.value; + } + } + this.setState({patterns: arr}); + this.setState({removedIndexPatterns: this.state.removedIndexPatterns.concat(-2)}); } onChangeFeatureValue(id) { @@ -40,7 +65,7 @@ class CfFeedback extends PureComponent { this.onChangeFeatureValue(id)} @@ -65,6 +86,20 @@ class CfFeedback extends PureComponent { ); } + getPatternSelector(id) { + return ( + + ); + } + getInputText() { return ( ); } - plusButton(id) { + featureAddButton(id) { return ( ); + onClick={() => this.onFeatureAddClicked()} + >ADD); } - removeButton(id) { + featureRemoveButton(id) { return ( ); + onClick={() => this.onFeatureRemoveClicked(id)} + >REMOVE); + } + + patternAddButton(id) { + return ( + ); + } + patternRemoveButton(id) { + return ( + ); } submitTopKButton() { return ( @@ -118,7 +177,7 @@ class CfFeedback extends PureComponent { color: 'darkblue', borderRadius: 5, borderWidth: 1, borderColor: '#fff'}} onClick={() => this.onSubmitTopKClicked()} - >Sumbit); + >SUBMIT); } evaluateFeatureButton() { return ( @@ -128,18 +187,18 @@ class CfFeedback extends PureComponent { color: 'darkblue', borderRadius: 5, borderWidth: 1, borderColor: '#fff'}} onClick={() => this.onEvaluateFeatureClicked()} - >Evaluate); + >EVALUATE); } - addNewDropdowns() { + addNewFeatureDropdowns() { let i =0; let arr = []; - for (i=0; i < this.state.numberOfDropdown; i++) { - if (!this.state.removedIndex.includes(i)) { + for (i=0; i < this.state.numberOfDropdownFeatures; i++) { + if (!this.state.removedIndexFeatures.includes(i)) { arr.push(
    {this.getFeatureNamesSelector(i)} {this.getFeatureValuesSelector(i)} - {this.plusButton(i)} - {this.removeButton(i)} + {this.featureAddButton(i)} + {this.featureRemoveButton(i)}
    ); } else arr.push(null); @@ -150,12 +209,42 @@ class CfFeedback extends PureComponent {
    ); } - onPlusClicked() { - this.setState({numberOfDropdown: this.state.numberOfDropdown+1}); + addNewPatternDropdowns() { + let i =0; + let arr = []; + for (i=0; i < this.state.numberOfDropdownPatterns; i++) { + if (!this.state.removedIndexPatterns.includes(i)) { + arr.push(
    + {this.getPatternSelector(i)} + {this.patternAddButton(i)} + {this.patternRemoveButton(i)} +
    + ); + } else arr.push(null); + } + return ( +
    + {arr} +
    + ); + } + onFeatureAddClicked() { + this.setState({numberOfDropdownFeatures: this.state.numberOfDropdownFeatures+1}); this.setState({featureNames: this.state.featureNames.concat(null)}); + this.setState({shownDropdownsFeatures: this.state.shownDropdownsFeatures+1}); } - onRemoveClicked(index) { - this.setState({removedIndex: this.state.removedIndex.concat(index)}); + onFeatureRemoveClicked(index) { + this.setState({removedIndexFeatures: this.state.removedIndexFeatures.concat(index)}); + this.setState({shownDropdownsFeatures: this.state.shownDropdownsFeatures-1}); + } + onPatternAddClicked() { + this.setState({numberOfDropdownPatterns: this.state.numberOfDropdownPatterns+1}); + this.setState({patterns: this.state.patterns.concat(null)}); + this.setState({shownDropdownsPatterns: this.state.shownDropdownsPatterns+1}); + } + onPatternRemoveClicked(index) { + this.setState({removedIndexPatterns: this.state.removedIndexPatterns.concat(index)}); + this.setState({shownDropdownsPatterns: this.state.shownDropdownsPatterns-1}); } onSubmitTopKClicked() { if (document.getElementById('topK') != null && (document.getElementById('topK')).value>0) { @@ -164,18 +253,38 @@ class CfFeedback extends PureComponent { } onEvaluateFeatureClicked() { let i = 0; - let featureNames = []; - let featureValues = []; - for (i = 0; i0) { + let mergedResult = getFeatureNamesAndValueFromSelectedPatterns(prefixs, + this.props.featureNames, this.props.featureValues); + mergedResult.forEach(element => { + data.push(element); + }); + } + this.props.onSubmitFeatureNamesAndValues(data); } initialResult(result) { return ( @@ -191,14 +300,19 @@ class CfFeedback extends PureComponent { ); } + onSelectedMatrixChange(matrix) { + this.setState({selectedMatrix: matrix}); + } render() { - if (this.state.numberOfDropdown == 0) { - this.setState({numberOfDropdown: this.state.numberOfDropdown+1}); - this.setState({featureNames: this.state.featureNames.concat(null)}); + if (this.state.shownDropdownsFeatures == 0) { + this.onFeatureAddClicked(); + } + if (this.state.shownDropdownsPatterns == 0) { + this.onPatternAddClicked(); } return ( - +
    @@ -207,14 +321,19 @@ class CfFeedback extends PureComponent {
    {!this.props.isCfFeedbackValuesLoaded ? : null} - {this.drawLine()} -

    Patterns to randomise

    +

    Features and Patterns to randomize

    +

    Randomizing patterns that affect wrong predictions the accuracy of + the classifier could improve

    + {this.addNewPatternDropdowns()} {!this.props.isEncodedUniqueValuesLoaded ? : null} - {this.addNewDropdowns()} + {this.addNewFeatureDropdowns()} {!this.props.isRetrainValuesLoaded ? : null}
    {JSON.stringify(this.props.retrainValue) !='{}' ? @@ -237,6 +356,7 @@ CfFeedback.propTypes = { isRetrainValuesLoaded: PropTypes.bool, isEncodedUniqueValuesLoaded: PropTypes.bool, featureNames: PropTypes.any, + patterns: PropTypes.any, featureValues: PropTypes.any, onSubmitTopK: PropTypes.func, onSubmitFeatureNamesAndValues: PropTypes.func, diff --git a/src/components/explanation/CfFeedbackResultTable.js b/src/components/explanation/CfFeedbackResultTable.js deleted file mode 100644 index 47d62027..00000000 --- a/src/components/explanation/CfFeedbackResultTable.js +++ /dev/null @@ -1,51 +0,0 @@ -import React, {PureComponent} from 'react'; -import {DataTable, TableBody, TableColumn, TableHeader, TableRow} from 'react-md/lib/DataTables/index'; -import PropTypes from 'prop-types'; -import {columnStyle} from '../../reference'; - -class CfFeedbackResultTable extends PureComponent { - constructor(props) { - super(props); - } - getHeaderColumns() { - const headers = ['Matrix', 'Result']; - return ( - - - - {headers.map((header) => {header})} - - - - - {'tp'} - {this.props.cfFeedbackResult['tp'].toString()} - - - {'tn'} - {this.props.cfFeedbackResult['tn'].toString()} - - - {'fp'} - {this.props.cfFeedbackResult['fp'].toString()} - - - {'fn'} - {this.props.cfFeedbackResult['fn'].toString()} - - - - ); - } - render() { - return
    - {this.getHeaderColumns()} -
    ; - } -} - -CfFeedbackResultTable.propTypes = { - cfFeedbackResult: PropTypes.any, -}; - -export default CfFeedbackResultTable; diff --git a/src/components/explanation/CfFeedbackResulttTable.js b/src/components/explanation/CfFeedbackResulttTable.js new file mode 100644 index 00000000..aa3b32b2 --- /dev/null +++ b/src/components/explanation/CfFeedbackResulttTable.js @@ -0,0 +1,114 @@ +import React, {PureComponent} from 'react'; +import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; +import PropTypes from 'prop-types'; +import {getPatternsForMatrix, getConfusionMatrixLabels} from '../../util/dataReducers'; +import {SelectField} from 'react-md'; + +class CfFeedbackResulttTable extends PureComponent { + constructor(props) { + super(props); + this.state = { + features: getPatternsForMatrix(this.props.cfFeedbackResult, this.props.selectedMatrix).slice(0, 10), + }; + } + + handlePagination(start, rowsPerPage) { + this.setState({ + features: getPatternsForMatrix(this.props.cfFeedbackResult, this.props.selectedMatrix) + .slice(start, start + rowsPerPage) + }); + } + + componentDidUpdate(prevProps) { + if (prevProps.selectedMatrix !== this.props.selectedMatrix + || prevProps.cfFeedbackResult !== this.props.cfFeedbackResult ) { + this.setState({features: getPatternsForMatrix(this.props.cfFeedbackResult, + this.props.selectedMatrix).slice(0, 10)}); + } + } + + getHeaderColumns(headers) { + return headers.map(header => { + let grow = false; + if (header === 'Configuration') { + grow = true; + } + return ( + + {' '} + {header} + + ); + }); + } + + getConfusionMatrixTable(values) { + return ( + + + + {this.getHeaderColumns(['Matrix', 'Pattern', 'Value'])} + + + + {values.map( + (value, index) => ( + + {value.map( + (v) => ( + {v} + ) + )} + + ) + )} + + + + ); + } + + getMatrixSelector() { + return ( + + ); + } + + onChangeMatrix(value, index, event, data) { + this.props.onSelectedMatrixChange(value); + } + + render() { + return
    +

    Confusion matrix filter

    + {this.getMatrixSelector()} + {this.getConfusionMatrixTable(this.state.features)} +
    ; + } +} + +CfFeedbackResulttTable.propTypes = { + cfFeedbackResult: PropTypes.array.isRequired, + onSelectedMatrixChange: PropTypes.func, + selectedMatrix: PropTypes.any, +}; + +export default CfFeedbackResulttTable; diff --git a/src/components/static/TimeSeriesPredictionMethodsCard.js b/src/components/static/TimeSeriesPredictionMethodsCard.js index 589c297a..2495c829 100644 --- a/src/components/static/TimeSeriesPredictionMethodsCard.js +++ b/src/components/static/TimeSeriesPredictionMethodsCard.js @@ -57,3 +57,5 @@ export const TimeSeriesPredictionMethodsCard = () => { // TODO: update ; }; +export default TimeSeriesPredictionMethodsCard; + diff --git a/src/reducers/Explanation.js b/src/reducers/Explanation.js index 198e4f83..6a972bdd 100644 --- a/src/reducers/Explanation.js +++ b/src/reducers/Explanation.js @@ -120,7 +120,7 @@ const explanation = (state = initialState, action) => { } case SKATER_VALUE_LIST_FAILED: { - const skaterValueList = initialState.limeValueList; + const skaterValueList = initialState.skaterValueList; return { ...state, fetchState: {inFlight: false, error: action.payload}, @@ -149,7 +149,7 @@ const explanation = (state = initialState, action) => { } case ICE_VALUE_LIST_FAILED: { - const iceValueList = initialState.limeValueList; + const iceValueList = initialState.iceValueList; return { ...state, fetchState: {inFlight: false, error: action.payload}, diff --git a/src/util/dataReducers.js b/src/util/dataReducers.js index 27d9a4be..43e75969 100644 --- a/src/util/dataReducers.js +++ b/src/util/dataReducers.js @@ -297,18 +297,6 @@ export const parseICEResult = (iceResult) => { return ({labels: labels, values: values, count: count}); }; -export const parseFairMLResult = (iceResult) => { - let labels = []; - let values = []; - let count = []; - for (let j = 0; j < iceResult.length; j++) { - labels.push(iceResult[j].label); - values.push(iceResult[j].value).toFixed(2); - count.push(iceResult[j].count | 0); - } - return ({labels: labels, values: values, count: count}); -}; - export const parseTemporalStabilityLimeResultList = (predictionList, traceId) => { let data = [[]]; let prefixs = []; @@ -460,11 +448,183 @@ export const getUniqueFeatureValues = (dfResult) =>{ }; export const parseCfFeedbackResult = (result) =>{ - let keys = Object.keys(result); - - if (keys.length>0) { - return {'tp': result['freq_seqs_after_filter']['tp'], 'tn': result['freq_seqs_after_filter']['tn'], - 'fp': result['freq_seqs_after_filter']['fp'], 'fn': result['freq_seqs_after_filter']['fn']}; + if (JSON.stringify(result) != '{}') { + let keys = Object.keys(result['freq_seqs_after_filter']); + if (keys.length>0) { + return {'tp': result['freq_seqs_after_filter']['tp'], 'tn': result['freq_seqs_after_filter']['tn'], + 'fp': result['freq_seqs_after_filter']['fp'], 'fn': result['freq_seqs_after_filter']['fn']}; + } } return {'tp': '', 'tn': '', 'fp': '', 'fn': ''}; }; + +export const getUniquePatterns = (result) =>{ + let resultArray = new Set(); + let i = 0; + let j = 0; + let k = 0; + if (result == null) return []; + else { + let keys = Object.keys(result['freq_seqs_after_filter']); + for (i=0; i0 ) { + for (j=0; j{ + let resultArray = []; + let i = 0; + let j = 0; + let k = 0; + if (JSON.stringify(result) != '{}') { + const uniquePatterns = encodePatternsForDropdown(result); + if (matrixName == 'All') { + let keys = Object.keys(result['freq_seqs_after_filter']); + for (i=0; i0 ) { + for (j=0; j { + let split = element.split(':'); + if (element.split(split[0]+':')[1]==patterns) { + arr.push(element); + } + }); + arr.push(result['freq_seqs_after_filter'][keys[i]][j][1]); + resultArray.push(arr); + } + } + } + } else { + matrixName = getAbrebiationConfusionMatrixName(matrixName); + if (result['freq_seqs_after_filter'][matrixName].length>0 ) { + for (j=0; j { + if (element==patterns) { + arr.push(patterns); + } + }); + arr.push(result['freq_seqs_after_filter'][matrixName][j][1]); + resultArray.push(arr); + } + } + } + } + return resultArray; +}; + +const getConfusionMatrixName = (key) => { + if (key == 'tp') return 'True Positive'; + if (key == 'tn') return 'True Negative'; + if (key == 'fp') return 'False Positive'; + if (key == 'fn') return 'False Negative'; + return null; +}; + +const getAbrebiationConfusionMatrixName = (key) => { + if (key == 'True Positive') return 'tp'; + if (key == 'True Negative') return 'tn'; + if (key == 'False Positive') return 'fp'; + if (key == 'False Negative') return 'fn'; + if (key == 'All') return 'All'; + return null; +}; + +export const encodePatternsForDropdown = (result) =>{ + let resultArray = []; + if (JSON.stringify(result) != '{}') { + const uniquePatterns = getUniquePatterns(result); + let i = 0; + for (i=0; i{ + if (JSON.stringify(result) != '{}') { + let labels = []; + let keys = Object.keys(result['freq_seqs_after_filter']); + keys.forEach(element => { + labels.push(getConfusionMatrixName(element)); + }); + if (labels.length>0) return ['All'].concat(labels); + } + return []; +}; + +export const decodePatterns = (length, encodedPatternList) =>{ + let i = 0; + let resultArray = []; + for (i=0; i=2) { + resultArray.push(encodedPatternList[i].split(lst[0])[1]); + } + } + return resultArray; +}; + +export const getFeatureNamesAndValueFromSelectedPatterns = (decodedSelectedPatterns, featureNames, featureValues) =>{ + let i = 0; + let j = 0; + let k = 0; + let resultArray = []; + for (i=0; i { + A: { + for (j=0; j
    @@ -416,8 +415,8 @@ const mapDispatchToProps = (dispatch) => ({ onRequestLimeTemporalList: (jobId, traceId) => dispatch(temporalLimePredictionListRequested({jobId, traceId})), onRequestCfFeedbackValues: (jobId, attribute) => dispatch(cffeedbackValueListRequested({jobId, attribute})), - onRequestRetrainValues: (jobId, featureNames, featureValues) => - dispatch(retrainValueListRequested({jobId, featureNames, featureValues})), + onRequestRetrainValues: (jobId, data) => + dispatch(retrainValueListRequested({jobId, data})), onRequestFailLimeValues: () => dispatch(limeValueListFailed(null)), onRequestFailShapValues: () => dispatch(shapValueListFailed(null)), onRequestFailIceValues: () => dispatch(iceValueListFailed(null)), diff --git a/src/views/Validation/Validation.js b/src/views/Validation/Validation.js index 616387d2..90523bdb 100644 --- a/src/views/Validation/Validation.js +++ b/src/views/Validation/Validation.js @@ -36,11 +36,11 @@ class Validation extends Component { } componentDidMount() { - if (this.props.jobs.length === 0) { - this.props.onRequestLogList(); - this.props.onRequestSplitList(); - this.props.onRequestJobs(); - } + // if (this.props.jobs.length === 0) { + // this.props.onRequestLogList(); + // this.props.onRequestSplitList(); + // this.props.onRequestJobs(); + // } ReactGA.initialize('UA-143444044-1'); ReactGA.pageview(window.location.hash); } diff --git a/stories/Explanation.js b/stories/Explanation.js index ca21032d..1254efdf 100644 --- a/stories/Explanation.js +++ b/stories/Explanation.js @@ -134,6 +134,16 @@ export const skaterResult = [ '' ]; +export const uniqueEncodedDecodedValues = { + 'prefix_1': { + 'inwend.geneesk. Out-year card costs': 0, + 'outpatient follow-up consultation': 1 + }, + 'prefix_2': { + 'outpatient follow-up consultation': 0, + 'Milk acid dehydrogenase LDH kinetic': 1 + } +} export const cfFeedbackResult =[ 'False', { From f07e3874546fea207ea89f823cd3a2cd75b0cd45 Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 19 Apr 2020 14:13:58 +0300 Subject: [PATCH 22/29] increase test coverage --- .codecov.yml | 6 +++--- src/actions/ServerActions.js | 4 ++-- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/.codecov.yml b/.codecov.yml index 4e00dee4..195dcba2 100644 --- a/.codecov.yml +++ b/.codecov.yml @@ -9,7 +9,7 @@ ignore: - "src/views/Labelling.js" - "src/components/upload/ServerUpload.jsx" - "src/components/upload/UploadDouble.jsx" - - "src/components/advanced/Checkbox.js - - "src/components/advanced/Incremental.js - - "src/components/advanced/IncrementalTable.js + - "src/components/advanced/Checkbox.js" + - "src/components/advanced/Incremental.js" + - "src/components/advanced/IncrementalTable.js" - "src/components/prediction/**/*.js" diff --git a/src/actions/ServerActions.js b/src/actions/ServerActions.js index e2cf6d2d..70ce5277 100644 --- a/src/actions/ServerActions.js +++ b/src/actions/ServerActions.js @@ -209,7 +209,7 @@ export const getIceValues = ({jobId, attribute}) => (dispatch) => { export const getCfFeedbackValues = ({jobId, attribute}) => (dispatch) => { jsonAjax( - SERVER_URL + `/explanation/cffeedback/${71}&${attribute}/`, + SERVER_URL + `/explanation/cffeedback/${jobId}&${attribute}/`, 'GET', null, (resul) => { @@ -221,7 +221,7 @@ export const getCfFeedbackValues = ({jobId, attribute}) => (dispatch) => { export const getRetrainValues = ({jobId, data}) => (dispatch) => { jsonAjax( - SERVER_URL + `/explanation/retrain/${71}/`, + SERVER_URL + `/explanation/retrain/${jobId}/`, 'POST', data, (resul) => { From daa00a372ab823a8dcc44345e4fdccda98b487f7 Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 19 Apr 2020 14:21:35 +0300 Subject: [PATCH 23/29] increase test coverage --- .codecov.yml | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/.codecov.yml b/.codecov.yml index 195dcba2..85482c4e 100644 --- a/.codecov.yml +++ b/.codecov.yml @@ -5,11 +5,9 @@ ignore: - "src/middlewares/WebSocketMiddleware.js" - "src/reducers/index.js" - "src/views/**/*.js" - - "src/views/Split.js" - - "src/views/Labelling.js" - "src/components/upload/ServerUpload.jsx" - "src/components/upload/UploadDouble.jsx" - "src/components/advanced/Checkbox.js" - "src/components/advanced/Incremental.js" - "src/components/advanced/IncrementalTable.js" - - "src/components/prediction/**/*.js" + - "src/components/prediction/*.js" From 93efa3f8a334d177e94edc722752d5bd2ed0e155 Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 19 Apr 2020 14:57:22 +0300 Subject: [PATCH 24/29] increase test coverage --- .codecov.yml | 3 +-- src/__tests__/util/dataReducers.test.js | 22 +++++++++++++++++++--- stories/Explanation.js | 3 ++- 3 files changed, 22 insertions(+), 6 deletions(-) diff --git a/.codecov.yml b/.codecov.yml index 85482c4e..02ac4a74 100644 --- a/.codecov.yml +++ b/.codecov.yml @@ -9,5 +9,4 @@ ignore: - "src/components/upload/UploadDouble.jsx" - "src/components/advanced/Checkbox.js" - "src/components/advanced/Incremental.js" - - "src/components/advanced/IncrementalTable.js" - - "src/components/prediction/*.js" + - "src/components/advanced/IncrementalTable.js" \ No newline at end of file diff --git a/src/__tests__/util/dataReducers.test.js b/src/__tests__/util/dataReducers.test.js index 59a25e0c..2149c5b1 100644 --- a/src/__tests__/util/dataReducers.test.js +++ b/src/__tests__/util/dataReducers.test.js @@ -1,9 +1,10 @@ /** * Created by tonis.kasekamp on 10/17/17. */ -import {makeLabels, makeTable, parseLimeResult, getTraceAttributes, getTraceIdsFromLogs} from '../../util/dataReducers'; +import {makeLabels, makeTable, parseLimeResult, getTraceAttributes, + getTraceIdsFromLogs, getUniqueFeatureValues, getFeatureNames } from '../../util/dataReducers'; import {regJobs} from '../../../stories/LineChart'; -import {limeList, traceList} from '../../../stories/Explanation'; +import {limeList, traceList, uniqueEncodedDecodedValues} from '../../../stories/Explanation'; import {log} from '../../../stories/Logs'; @@ -63,4 +64,19 @@ describe('generates data for prefix chart', () => { const traceIds = getTraceIdsFromLogs({'1': log}, '1'); expect(traceIds.length).toEqual(4); }); -}); + + it('getUniqueFeatureValues ', () => { + const uniqueValues = getUniqueFeatureValues(uniqueEncodedDecodedValues); + expect(uniqueValues['encodedResult']['prefix_1']).toEqual([0, 1]); + expect(uniqueValues['encodedResult']['prefix_2']).toEqual([0, 1]); + expect(uniqueValues['decodedResult']['prefix_1']).toEqual(['inwend.geneesk. Out-year card costs', 'outpatient follow-up consultation']); + expect(uniqueValues['decodedResult']['prefix_2']).toEqual(['outpatient follow-up consultation', 'Milk acid dehydrogenase LDH kinetic']);}); + }); + + it('getFeatureNames', () => { + const featureNames = getFeatureNames(uniqueEncodedDecodedValues); + expect(featureNames.length).toEqual(2); + expect(featureNames.toString()).toEqual('prefix_1,prefix_2'); + }); + + diff --git a/stories/Explanation.js b/stories/Explanation.js index 1254efdf..4568be44 100644 --- a/stories/Explanation.js +++ b/stories/Explanation.js @@ -143,7 +143,8 @@ export const uniqueEncodedDecodedValues = { 'outpatient follow-up consultation': 0, 'Milk acid dehydrogenase LDH kinetic': 1 } -} +}; + export const cfFeedbackResult =[ 'False', { From 6a682cbace6f03e45b1490531a97ed045af76c97 Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 19 Apr 2020 15:08:47 +0300 Subject: [PATCH 25/29] increase test coverage --- .codecov.yml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/.codecov.yml b/.codecov.yml index 02ac4a74..0b037382 100644 --- a/.codecov.yml +++ b/.codecov.yml @@ -4,6 +4,8 @@ ignore: - "src/actions/WebSocket.js" - "src/middlewares/WebSocketMiddleware.js" - "src/reducers/index.js" + - "src/views/Split.js" + - "src/views/Labelling.js" - "src/views/**/*.js" - "src/components/upload/ServerUpload.jsx" - "src/components/upload/UploadDouble.jsx" From fe35de28d8571ed81f9ca70610867bea8fd6e43c Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 19 Apr 2020 15:25:18 +0300 Subject: [PATCH 26/29] increase test coverage --- src/__tests__/util/dataReducers.test.js | 7 +++---- src/views/Explanation/Explanation.js | 18 +++++++++--------- 2 files changed, 12 insertions(+), 13 deletions(-) diff --git a/src/__tests__/util/dataReducers.test.js b/src/__tests__/util/dataReducers.test.js index 2149c5b1..0ffa8312 100644 --- a/src/__tests__/util/dataReducers.test.js +++ b/src/__tests__/util/dataReducers.test.js @@ -2,7 +2,7 @@ * Created by tonis.kasekamp on 10/17/17. */ import {makeLabels, makeTable, parseLimeResult, getTraceAttributes, - getTraceIdsFromLogs, getUniqueFeatureValues, getFeatureNames } from '../../util/dataReducers'; + getTraceIdsFromLogs, getUniqueFeatureValues, getFeatureNames} from '../../util/dataReducers'; import {regJobs} from '../../../stories/LineChart'; import {limeList, traceList, uniqueEncodedDecodedValues} from '../../../stories/Explanation'; import {log} from '../../../stories/Logs'; @@ -70,7 +70,7 @@ describe('generates data for prefix chart', () => { expect(uniqueValues['encodedResult']['prefix_1']).toEqual([0, 1]); expect(uniqueValues['encodedResult']['prefix_2']).toEqual([0, 1]); expect(uniqueValues['decodedResult']['prefix_1']).toEqual(['inwend.geneesk. Out-year card costs', 'outpatient follow-up consultation']); - expect(uniqueValues['decodedResult']['prefix_2']).toEqual(['outpatient follow-up consultation', 'Milk acid dehydrogenase LDH kinetic']);}); + expect(uniqueValues['decodedResult']['prefix_2']).toEqual(['outpatient follow-up consultation', 'Milk acid dehydrogenase LDH kinetic']); }); it('getFeatureNames', () => { @@ -78,5 +78,4 @@ describe('generates data for prefix chart', () => { expect(featureNames.length).toEqual(2); expect(featureNames.toString()).toEqual('prefix_1,prefix_2'); }); - - +}); diff --git a/src/views/Explanation/Explanation.js b/src/views/Explanation/Explanation.js index fb97df51..2f129f23 100644 --- a/src/views/Explanation/Explanation.js +++ b/src/views/Explanation/Explanation.js @@ -109,16 +109,16 @@ class Explanation extends Component { onChangeJob(id) { this.props.onJobChange(id); - // if (this.props.selectedTrace !== '') { - // this.props.onRequestLimeValues(id, this.props.selectedTrace); - // this.props.onRequestLimeTemporalList(id, this.props.selectedTrace); - // this.props.onRequestPredictionTemporalList(id, this.props.selectedTrace); - // this.props.onRequestShapValues(id, this.props.selectedTrace); - // } - // this.props.onRequestSkaterValues(id); - // this.props.onRequestDecoding(id); + if (this.props.selectedTrace !== '') { + this.props.onRequestLimeValues(id, this.props.selectedTrace); + this.props.onRequestLimeTemporalList(id, this.props.selectedTrace); + this.props.onRequestPredictionTemporalList(id, this.props.selectedTrace); + this.props.onRequestShapValues(id, this.props.selectedTrace); + } + this.props.onRequestSkaterValues(id); + this.props.onRequestDecoding(id); this.props.onRequestEncodeUniqueValuesDF(id); - // this.props.onRequestIceValues(id, this.state.selectedAttribute); + this.props.onRequestIceValues(id, this.state.selectedAttribute); } componentDidMount() { From b3c95a0f4336410ab9c7bc494848188111428482 Mon Sep 17 00:00:00 2001 From: Musacca Date: Sun, 19 Apr 2020 18:01:38 +0300 Subject: [PATCH 27/29] small fix --- .vscode/launch.json | 20 ----- ....test.js => CfFeedbackResultTable.test.js} | 4 +- ...sulttTable.js => CfFeedbackResultTable.js} | 6 +- src/util/dataReducers.js | 80 ++++++++++--------- 4 files changed, 46 insertions(+), 64 deletions(-) delete mode 100644 .vscode/launch.json rename src/__tests__/components/explanation/{CfFeedbackResulttTable.test.js => CfFeedbackResultTable.test.js} (89%) rename src/components/explanation/{CfFeedbackResulttTable.js => CfFeedbackResultTable.js} (96%) diff --git a/.vscode/launch.json b/.vscode/launch.json deleted file mode 100644 index 389a6188..00000000 --- a/.vscode/launch.json +++ /dev/null @@ -1,20 +0,0 @@ -{ - // Use IntelliSense to learn about possible attributes. - // Hover to view descriptions of existing attributes. - // For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387 - "version": "0.2.0", - "configurations": [ - { - "type": "node", - "request": "launch", - "name": "Launch Program", - "skipFiles": [ - "/**" - ], - "program": "${workspaceFolder}\\start", - "outFiles": [ - "${workspaceFolder}/**/*.js" - ] - } - ] -} \ No newline at end of file diff --git a/src/__tests__/components/explanation/CfFeedbackResulttTable.test.js b/src/__tests__/components/explanation/CfFeedbackResultTable.test.js similarity index 89% rename from src/__tests__/components/explanation/CfFeedbackResulttTable.test.js rename to src/__tests__/components/explanation/CfFeedbackResultTable.test.js index 073aa947..f82fa3fd 100644 --- a/src/__tests__/components/explanation/CfFeedbackResulttTable.test.js +++ b/src/__tests__/components/explanation/CfFeedbackResultTable.test.js @@ -1,7 +1,7 @@ import React from 'react'; import {shallow} from 'enzyme'; import {DataTable, TableBody, TableColumn, TableHeader, TablePagination, TableRow} from 'react-md/lib/DataTables/index'; -import CfFeedbackResulttTable from '../../../components/explanation/CfFeedbackResulttTable'; +import CfFeedbackResultTable from '../../../components/explanation/CfFeedbackResultTable'; import {cfFeedbackResult} from '../../../../stories/Explanation'; import {SelectField} from 'react-md'; @@ -9,7 +9,7 @@ const onSelectedMatrixChange = jest.fn(); describe('Cf feedback result Table', () => { it('renders', () => { - const element = shallow( { - let i; let j; + let i; + let j; let allValues =[]; for (j = 0; j < columnNames.length; j++) { if (columnNames[j] != 'All') { @@ -235,13 +236,13 @@ export const getRadarChartValuesForAllColumns = ( for (i = 0; i < radarCharLabels.length; i++) { const radarChartObject = radarChartObjects[i]; if (isNaN(Number(prefixLengthValue))) { - radarChartDatas.push(getAverage(radarChartObject, j+1)); + radarChartDatas.push(getAverage(radarChartObject, j + 1)); } else { radarChartDatas.push( getValueForColumnName( radarChartObject, prefixLengthValue, - j+1 + j + 1 ) ); } @@ -347,15 +348,14 @@ export const parseTemporalStabilityPredictionResultList = (predictionList, trace }; export const getTraceAttributes = (traceList, selectedTrace) =>{ - let i=0; + let i = 0; if (traceList === undefined) { traceList = []; } let traceAttributesHeader = getTraceAttributesHeader(traceList); let traceEventsHeaders = getTraceEventsHeader(traceList); let traceArr = {'attributes': [], 'events': []}; - i=0; - for (i =0; i{ }; const getTraceAttributesHeader = (traceList) =>{ - let i=0; + let i = 0; let traceAttributesHeader = []; - for (i =0; i{ const getTraceEventsHeader = (traceList) =>{ - let i=0; + let i = 0; let traceEventsHeaders = []; - for (i =0; i{ export const getIceResultListTable = (iceResultList) =>{ - let i=0; + let i = 0; let result = []; - for (i = 0; i{ }; export const getDecodedDFTable = (dfResult) =>{ - let i=0; let j=0; + let i = 0; + let j = 0; let result = []; let keys = Object.keys(dfResult); - if (keys.length>0) { + if (keys.length > 0) { for (j = 0; j < dfResult[keys[0]].length; j++) { let arr = []; arr.push(j+1); - for (i = 0; i{ }; export const getUniqueFeatureValues = (dfResult) =>{ - let i=0; let j=0; + let i = 0; + let j = 0; let encodedResult = {}; let decodedResult = {}; let keys = Object.keys(dfResult); if (keys.length>0) { - for (i = 0; i{ if (result == null) return []; else { let keys = Object.keys(result['freq_seqs_after_filter']); - for (i=0; i0 ) { - for (j=0; j 0 ) { + for (j = 0; j < result['freq_seqs_after_filter'][keys[i]].length; j++) { let patterns = ''; - for (k=0; k{ const uniquePatterns = encodePatternsForDropdown(result); if (matrixName == 'All') { let keys = Object.keys(result['freq_seqs_after_filter']); - for (i=0; i0 ) { - for (j=0; j { @@ -532,16 +534,16 @@ export const getPatternsForMatrix = (result, matrixName) =>{ } } else { matrixName = getAbrebiationConfusionMatrixName(matrixName); - if (result['freq_seqs_after_filter'][matrixName].length>0 ) { - for (j=0; j 0 ) { + for (j = 0; j < result['freq_seqs_after_filter'][matrixName].length; j++) { let arr = []; arr.push(getConfusionMatrixName(matrixName)); let patterns = ''; - for (k=0; k { @@ -580,7 +582,7 @@ export const encodePatternsForDropdown = (result) =>{ if (JSON.stringify(result) != '{}') { const uniquePatterns = getUniquePatterns(result); let i = 0; - for (i=0; i{ export const decodePatterns = (length, encodedPatternList) =>{ let i = 0; let resultArray = []; - for (i=0; i=2) { + if (lst.length >= 2) { resultArray.push(encodedPatternList[i].split(lst[0])[1]); } } @@ -616,14 +618,14 @@ export const getFeatureNamesAndValueFromSelectedPatterns = (decodedSelectedPatte let j = 0; let k = 0; let resultArray = []; - for (i=0; i { A: { - for (j=0; j Date: Sat, 25 Apr 2020 20:48:38 +0300 Subject: [PATCH 28/29] small design changes --- src/__tests__/components/explanation/CfFeedback.test.js | 6 +++--- src/components/chart/HorizontalBarChartCard.js | 2 +- src/components/chart/PredictionLineChart.js | 2 +- src/components/explanation/CfFeedback.js | 4 ++-- src/components/explanation/CfFeedbackResultTable.js | 2 +- src/components/explanation/post_hoc.js | 2 +- src/reducers/Explanation.js | 6 ++++++ 7 files changed, 15 insertions(+), 9 deletions(-) diff --git a/src/__tests__/components/explanation/CfFeedback.test.js b/src/__tests__/components/explanation/CfFeedback.test.js index 8ccb07f9..108dec6f 100644 --- a/src/__tests__/components/explanation/CfFeedback.test.js +++ b/src/__tests__/components/explanation/CfFeedback.test.js @@ -5,7 +5,7 @@ import {retrainResult, cfFeedbackResult, uniqueEncodedDecodedValues} from '../.. import CfFeedback from '../../../components/explanation/CfFeedback'; import RetrainResultTable from '../../../components/explanation/RetrainResultTable'; import {TextField, SelectField} from 'react-md'; -import CfFeedbackResulttTable from '../../../components/explanation/CfFeedbackResulttTable'; +import CfFeedbackResultTable from '../../../components/explanation/CfFeedbackResultTable'; import {getUniqueFeatureValues, getFeatureNames, encodePatternsForDropdown} from '../../../util/dataReducers'; const onSubmitTopK = jest.fn(); @@ -30,7 +30,7 @@ describe('CfFeedback result', () => { element.setState({numberOfDropdownPatterns: 1}); expect(element.find(TextField).length).toBe(1); - expect(element.find(CfFeedbackResulttTable).length).toBe(1); + expect(element.find(CfFeedbackResultTable).length).toBe(1); expect(element.find(RetrainResultTable).length).toBe(1); expect(element.find(TextField).at(0).props().min).toBe(0); expect(element.find(SelectField).length).toBe(3); @@ -56,7 +56,7 @@ describe('CfFeedback result', () => { element.setState({numberOfDropdownPatterns: 1}); expect(element.find(TextField).length).toBe(1); - expect(element.find(CfFeedbackResulttTable).length).toBe(1); + expect(element.find(CfFeedbackResultTable).length).toBe(1); expect(element.find(RetrainResultTable).length).toBe(1); expect(element.find(TextField).at(0).props().min).toBe(0); expect(element.find(SelectField).length).toBe(3); diff --git a/src/components/chart/HorizontalBarChartCard.js b/src/components/chart/HorizontalBarChartCard.js index e596977b..bce97f85 100644 --- a/src/components/chart/HorizontalBarChartCard.js +++ b/src/components/chart/HorizontalBarChartCard.js @@ -74,7 +74,7 @@ class HorizontalBarChartCard extends React.Component { /> ); - return
    {this.props.data.length === 0 ? '' : chart}
    ; + return
    {this.props.data.length === 0 || this.props.labels.length === 0 ? '' : chart}
    ; } } diff --git a/src/components/chart/PredictionLineChart.js b/src/components/chart/PredictionLineChart.js index e1c3cdd5..776e22ff 100644 --- a/src/components/chart/PredictionLineChart.js +++ b/src/components/chart/PredictionLineChart.js @@ -51,7 +51,7 @@ class PredictionLineChart extends React.Component { }, labels: { formatter: function (val, i) { - return val; + return val.toFixed(2); } } }, diff --git a/src/components/explanation/CfFeedback.js b/src/components/explanation/CfFeedback.js index 25cfe6f1..13c523f9 100644 --- a/src/components/explanation/CfFeedback.js +++ b/src/components/explanation/CfFeedback.js @@ -3,7 +3,7 @@ import {Card, CardTitle, CardText} from 'react-md/lib/Cards/index'; import PropTypes from 'prop-types'; import CircularProgress from 'react-md/lib/Progress/CircularProgress'; import {TextField} from 'react-md'; -import CfFeedbackResulttTable from './CfFeedbackResulttTable'; +import CfFeedbackResultTable from './CfFeedbackResultTable'; import SelectField from 'react-md/lib/SelectFields'; import {Row} from 'react-grid-system'; import RetrainResultTable from './RetrainResultTable'; @@ -321,7 +321,7 @@ class CfFeedback extends PureComponent {
{!this.props.isCfFeedbackValuesLoaded ? : null} - - {this.getHeaderColumns(['Matrix', 'Pattern', 'Value'])} + {this.getHeaderColumns(['Class', 'Pattern', 'Frequency'])} diff --git a/src/components/explanation/post_hoc.js b/src/components/explanation/post_hoc.js index 9b8b4131..dd02a8af 100644 --- a/src/components/explanation/post_hoc.js +++ b/src/components/explanation/post_hoc.js @@ -22,7 +22,7 @@ const PostHocExplanation = (props) => { {!props.isLimeValuesLoaded ? : null}
- {props.limeValueList.values.length > 0 ? horizontalBarChart : null} + {horizontalBarChart}
; diff --git a/src/reducers/Explanation.js b/src/reducers/Explanation.js index 3bb1c8fa..50cfabb0 100644 --- a/src/reducers/Explanation.js +++ b/src/reducers/Explanation.js @@ -46,6 +46,7 @@ const explanation = (state = initialState, action) => { case LIME_VALUE_LIST_REQUESTED: { return { ...state, + limeValueList: {}, fetchState: {inFlight: true}, isLimeValuesLoaded: false, @@ -75,6 +76,7 @@ const explanation = (state = initialState, action) => { case SHAP_VALUE_LIST_REQUESTED: { return { ...state, + shapValueList: {}, fetchState: {inFlight: true}, isShapValuesLoaded: false, @@ -104,6 +106,7 @@ const explanation = (state = initialState, action) => { case SKATER_VALUE_LIST_REQUESTED: { return { ...state, + skaterValueList: {}, fetchState: {inFlight: true}, isSkaterValuesLoaded: false, @@ -133,6 +136,7 @@ const explanation = (state = initialState, action) => { case ICE_VALUE_LIST_REQUESTED: { return { ...state, + iceValueList: {}, fetchState: {inFlight: true}, isIceValuesLoaded: false, @@ -162,6 +166,7 @@ const explanation = (state = initialState, action) => { case CFFEEDBACK_VALUE_LIST_REQUESTED: { return { ...state, + cfFeedbackValue: {}, fetchState: {inFlight: true}, isCfFeedbackLoaded: false, @@ -191,6 +196,7 @@ const explanation = (state = initialState, action) => { case RETRAIN_VALUE_LIST_REQUESTED: { return { ...state, + retrainValue: {}, fetchState: {inFlight: true}, isRetrainLoaded: false, From 42a26e5102da9adcdc63915a47801867d4963abe Mon Sep 17 00:00:00 2001 From: Musacca Date: Sat, 25 Apr 2020 21:02:42 +0300 Subject: [PATCH 29/29] small design changes --- .../components/chart/HorizontalBarChartCard.test.js | 6 +----- src/__tests__/components/explanation/post_hoc.test.js | 2 +- 2 files changed, 2 insertions(+), 6 deletions(-) diff --git a/src/__tests__/components/chart/HorizontalBarChartCard.test.js b/src/__tests__/components/chart/HorizontalBarChartCard.test.js index b71b53b4..9c79a1aa 100644 --- a/src/__tests__/components/chart/HorizontalBarChartCard.test.js +++ b/src/__tests__/components/chart/HorizontalBarChartCard.test.js @@ -16,11 +16,7 @@ describe('HorizontalBarChartCard', () => { it('renders with empty labels', () => { const element = shallow(); expect(element).toBeDefined(); - expect(element.find(ReactApexChart).length).toBe(1); - - const chartProps = element.find(ReactApexChart).props(); - expect(chartProps.options.xaxis.categories.length).toBe(0); - expect(chartProps.series[0].data.length).toBe(5); + expect(element.find(ReactApexChart).length).toBe(0); }); it('renders with non empty data and label', () => { diff --git a/src/__tests__/components/explanation/post_hoc.test.js b/src/__tests__/components/explanation/post_hoc.test.js index 0f112aaa..51128f3a 100644 --- a/src/__tests__/components/explanation/post_hoc.test.js +++ b/src/__tests__/components/explanation/post_hoc.test.js @@ -13,7 +13,7 @@ describe('Lime result', () => { traceId={1} limeValueList={{labels: [], values: []}}/>); expect(element).toBeDefined(); - expect(element.find(HorizontalBarChartCard).length).toBe(0); + expect(element.find(HorizontalBarChartCard).length).toBe(1); }); it('renders with data', () => {