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Package: planet
Title: Placental DNA methylation analysis tools
Version: 1.15.5
Authors@R:
c(person("Victor", "Yuan", email = "victor.2wy@gmail.com",
role = c("aut", "cre")),
person(c("Wendy", "P."), "Robinson",
role = c("aut", "ctb")),
person("Icíar", "Fernández-Boyano", email = "iciarfernandez@outlook.com",
role = c("aut", "ctb")))
URL: http://github.com/wvictor14/planet, http://victoryuan.com/planet/
BugReports:
http://github.com/wvictor14/planet/issues
Description: This package contains R functions to predict biological variables
to from placnetal DNA methylation data generated from infinium arrays. This
includes inferring ethnicity/ancestry, gestational age, and cell composition
from placental DNA methylation array (450k/850k) data.
Depends:
R (>= 4.3)
Imports:
methods,
tibble,
magrittr,
dplyr
Suggests:
ExperimentHub,
mixOmics,
ggplot2,
testthat,
tidyr,
scales,
minfi,
EpiDISH,
knitr,
rmarkdown
License: GPL-2
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.3.2
VignetteBuilder: knitr
biocViews: Software, DifferentialMethylation, Epigenetics, Microarray,
MethylationArray, DNAMethylation, CpGIsland
Roxygen: list(markdown = TRUE)