add emit directive for BAM output in ONT_BASECALL process #5
Workflow file for this run
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| name: publish | |
| on: | |
| push: | |
| tags: | |
| - v* | |
| env: | |
| REGISTRY: ghcr.io | |
| IMAGE_NAME: ${{ github.repository }} | |
| jobs: | |
| publish-container: | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| packages: write | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v3 | |
| with: | |
| platforms: all | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| with: | |
| platforms: linux/amd64 | |
| install: true | |
| - name: Log in to the Container registry | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: ${{ env.REGISTRY }} | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GH_PAT }} | |
| - name: Extract metadata (tags, labels) for Docker | |
| id: meta | |
| uses: docker/metadata-action@v5 | |
| with: | |
| images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }} | |
| tags: | | |
| type=semver,pattern={{version}} | |
| labels: | | |
| org.opencontainers.image.source=${{ github.repository }} | |
| org.opencontainers.image.description=${{ github.repository }}/blob/main/README.md | |
| - name: Build and push Docker image | |
| uses: docker/build-push-action@v6 | |
| with: | |
| platforms: linux/amd64 | |
| context: . | |
| file: ./container/Dockerfile | |
| push: true | |
| provenance: false | |
| tags: ${{ steps.meta.outputs.tags }} | |
| labels: ${{ steps.meta.outputs.labels }} |