Skip to content

Commit 4c35414

Browse files
committed
added additonal memory for adapter removal
1 parent 2ac92d0 commit 4c35414

1 file changed

Lines changed: 2 additions & 2 deletions

File tree

nextflow.config

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -26,7 +26,7 @@ profiles {
2626
time = { "${Math.min(task.attempt, 3)}d" }
2727
withName: 'ADAPTER_TRIM' {
2828
cpus = { Math.min(32 * task.attempt, 64) }
29-
memory = { "${Math.min(48 * task.attempt, 128)} GB" }
29+
memory = { "${Math.min(64 * task.attempt, 128)} GB" }
3030
time = { "${Math.min(task.attempt, 3)}d" }
3131
}
3232
withName: 'STAR_GENOME_INDEX' {
@@ -37,7 +37,7 @@ profiles {
3737
withName: 'STAR_ALIGNMENT_WASP' {
3838
cpus = { Math.min(32 * task.attempt, 64) }
3939
memory = { "${Math.min(64 * task.attempt, 128)} GB" }
40-
time = { "${Math.min(2 * task.attempt, 3)}d" }
40+
time = { "${Math.min(task.attempt, 3)}d" }
4141
}
4242
withName: 'SUBSET_1KGP_VCF' {
4343
cpus = { Math.min(32 * task.attempt, 64) }

0 commit comments

Comments
 (0)