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Add plink fit regenie subworkflow

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labeler on: pull_request

Label the PR size

Run when nf-test-gpu tests are skipped on: pull_request

check-files

confirm-pass-gpu

Run Linting on: pull_request

pre-commit

nf-core-changes

nf-core lint modules (regenie/runl1)

nf-core lint subworkflows (plink_fit_regenie)

confirm-pass-lint

Run GPU nf-tests on: pull_request

nf-test-changes

GPU Test | g4dn.xlarge | ${{ matrix.profile }} | ${{ matrix.shard }}

GPU Test | g4dn.2xlarge | ${{ matrix.profile }} | ${{ matrix.shard }}

confirm-pass-gpu

Run when nf-test tests are skipped on: pull_request

check-files

confirm-pass-nf-test

Run nf-test on: pull_request 10

nf-test-changes

x64 | conda | 1

x64 | docker | 1

x64 | singularity | 1

x64 | conda | 2

x64 | docker | 2

x64 | singularity | 2

x64 | conda | 3

x64 | docker | 3

x64 | singularity | 3

x64 | conda | 4

x64 | docker | 4

x64 | singularity | 4

x64 | conda | 5

x64 | docker | 5

x64 | singularity | 5

x64 | conda | 6

x64 | docker | 6

x64 | singularity | 6

x64 | conda | 7

x64 | docker | 7

x64 | singularity | 7

x64 | conda | 8

x64 | docker | 8

x64 | singularity | 8

x64 | conda | 9

x64 | docker | 9

x64 | singularity | 9

x64 | conda | 10

x64 | docker | 10

x64 | singularity | 10

x64 | conda | 11

x64 | docker | 11

x64 | singularity | 11

confirm-pass-nf-test

Label the PR size

succeeded Jun 9, 2026 in 10s

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